PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000354619	[[236378854, 236381876], [236384131, 236384265], [236385223, 236385310], [236388369, 236388439], [236389568, 236389815], [236389946, 236390039], [236393523, 236393550], [236396127, 236396139], [236399088, 236399135], [236399577, 236399698], [236406721, 236406795], [236413184, 236413267], [236415349, 236415391], [236416721, 236416805], [236433174, 236433294], [236444981, 236445285]]	[[236381815, 236381876], [236384131, 236384265], [236385223, 236385310], [236388369, 236388439], [236389568, 236389815], [236389946, 236390039], [236393523, 236393550], [236396127, 236396139], [236399088, 236399135], [236399577, 236399698], [236406721, 236406795], [236413184, 236413267], [236415349, 236415391], [236416721, 236416805], [236433174, 236433294], [236444981, 236445083]]
ENST00000264181	[[236383472, 236384265], [236385223, 236385310], [236388369, 236388439], [236389568, 236389795]]	[[236384127, 236384265], [236385223, 236385310], [236388369, 236388439], [236389568, 236389795]]
ENST00000327333	[[236399284, 236399698], [236413184, 236413267], [236415349, 236415391], [236416721, 236416805], [236433174, 236433294], [236444981, 236445319]]	[[236399694, 236399698], [236413184, 236413267], [236415349, 236415391], [236416721, 236416805], [236433174, 236433294], [236444981, 236445083]]
ENST00000366589	[[236399631, 236399698], [236406721, 236406795], [236413184, 236413267], [236415349, 236415391], [236416721, 236416805], [236433174, 236433294], [236444766, 236444901]]	[[236399631, 236399698], [236406721, 236406795], [236413184, 236413258]]
NM_019891	[[236378421, 236381876], [236384131, 236384265], [236385223, 236385310], [236388369, 236388439], [236389568, 236389815], [236389946, 236390039], [236393523, 236393550], [236396127, 236396139], [236399088, 236399135], [236399577, 236399698], [236406721, 236406795], [236413184, 236413267], [236415349, 236415391], [236416721, 236416805], [236433174, 236433294], [236444981, 236445339]]	[[236381815, 236381876], [236384131, 236384265], [236385223, 236385310], [236388369, 236388439], [236389568, 236389815], [236389946, 236390039], [236393523, 236393550], [236396127, 236396139], [236399088, 236399135], [236399577, 236399698], [236406721, 236406795], [236413184, 236413267], [236415349, 236415391], [236416721, 236416805], [236433174, 236433294], [236444981, 236445083]]

Promoter

Chrom	Start	End	Description
chr1	236445251	236445266	CAGE_peak_1_at_ERO1LB_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr1	GH01I236280	236280532	236282808	2.06	[{'connected_gene': 'ERO1B', 'score': 565.85}, {'connected_gene': 'GGPS1', 'score': 21.21}, {'connected_gene': 'GNG4', 'score': 10.98}, {'connected_gene': 'RNU2-70P', 'score': 0.39}]
chr1	GH01I236251	236251306	236251389	0.24	[{'connected_gene': 'ERO1B', 'score': 11.56}, {'connected_gene': 'GPR137B', 'score': 2.09}, {'connected_gene': 'GC01P236268', 'score': 0.37}]
chr1	GH01I236450	236450881	236451030	0.31	[{'connected_gene': 'ERO1B', 'score': 10.72}, {'connected_gene': 'LGALS8', 'score': 9.98}, {'connected_gene': 'LGALS8-AS1', 'score': 9.79}, {'connected_gene': 'GC01P236477', 'score': 0.31}, {'connected_gene': 'EDARADD', 'score': 0.15}]
chr1	GH01I236333	236333321	236333470	0.64	[{'connected_gene': 'ERO1B', 'score': 8.82}, {'connected_gene': 'EDARADD', 'score': 0.39}, {'connected_gene': 'LOC100130485', 'score': 0.25}]
chr1	GH01I236302	236302001	236302150	0.59	[{'connected_gene': 'ERO1B', 'score': 7.23}, {'connected_gene': 'LOC100130485', 'score': 0.37}, {'connected_gene': 'EDARADD', 'score': 0.25}]
chr1	GH01I236283	236283859	236285071	0.99	[{'connected_gene': 'ERO1B', 'score': 0.77}, {'connected_gene': 'LOC100130485', 'score': 0.77}]
chr1	GH01I236470	236470811	236472535	0.9	[{'connected_gene': 'LGALS8', 'score': 11.38}, {'connected_gene': 'LGALS8-AS1', 'score': 11.0}, {'connected_gene': 'ENSG00000273058', 'score': 10.89}, {'connected_gene': 'ENSG00000230325', 'score': 10.37}, {'connected_gene': 'GPR137B', 'score': 10.25}, {'connected_gene': 'ERO1B', 'score': 10.24}, {'connected_gene': 'GC01P236477', 'score': 0.44}, {'connected_gene': 'EDARADD', 'score': 0.13}]
chr1	GH01I236288	236288068	236289071	0.78	[{'connected_gene': 'LOC100130485', 'score': 550.77}, {'connected_gene': 'LDHAP2', 'score': 10.94}, {'connected_gene': 'GPR137B', 'score': 10.42}, {'connected_gene': 'HEATR1', 'score': 10.39}, {'connected_gene': 'ARID4B', 'score': 10.24}, {'connected_gene': 'LYST', 'score': 10.01}, {'connected_gene': 'ENSG00000230325', 'score': 9.79}, {'connected_gene': 'ERO1B', 'score': 6.97}, {'connected_gene': 'EDARADD', 'score': 0.22}]
chr1	GH01I236228	236228601	236228800	0.2	[{'connected_gene': 'GC01P236268', 'score': 0.28}, {'connected_gene': 'ERO1B', 'score': 0.23}, {'connected_gene': 'GPR137B', 'score': 0.17}]
chr1	GH01I236267	236267764	236267943	0.37	[{'connected_gene': 'GC01P236268', 'score': 550.77}, {'connected_gene': 'RNU2-70P', 'score': 550.77}, {'connected_gene': 'LGALS8', 'score': 2.17}, {'connected_gene': 'ERO1B', 'score': 1.6}]