PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000594378	[[43225789, 43226242], [43228093, 43228177], [43233274, 43233368], [43233929, 43234208], [43236935, 43237214], [43237538, 43237878], [43242875, 43243241], [43243472, 43243524]]	[[43237819, 43237878], [43242875, 43243092]]
ENST00000327495	[[43225793, 43226242], [43228093, 43228177], [43233274, 43233529], [43233929, 43234208], [43236935, 43237214], [43242875, 43243241], [43244472, 43244721]]	[[43228133, 43228177], [43233274, 43233529], [43233929, 43234208], [43236935, 43237214], [43242875, 43243241], [43244472, 43244536]]
ENST00000595140	[[43225854, 43226242], [43233274, 43233529], [43233929, 43234208], [43236935, 43237214], [43242875, 43243241], [43244472, 43244629]]	[[43226057, 43226242], [43233274, 43233529], [43233929, 43234208], [43236935, 43237214], [43242875, 43243241], [43244472, 43244536]]
ENST00000597009	[[43236059, 43237214], [43242875, 43243241], [43244472, 43244626]]	None
ENST00000490592	[[43237740, 43237878], [43238198, 43238347], [43242875, 43243241], [43243472, 43243628]]	None
NM_021016	[[43225793, 43226242], [43228093, 43228177], [43233274, 43233529], [43233929, 43234208], [43236935, 43237214], [43242875, 43243241], [43244472, 43244668]]	[[43228133, 43228177], [43233274, 43233529], [43233929, 43234208], [43236935, 43237214], [43242875, 43243241], [43244472, 43244536]]

Promoter

Chrom	Start	End	Description
chr19	43244610	43244652	CAGE_peak_1_at_PSG3_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr19	GH19I042740	42740471	42740530	0.5	[{'connected_gene': 'PSG3', 'score': 550.77}, {'connected_gene': 'PIR38528', 'score': 0.25}]
chr19	GH19I042760	42760143	42763591	1.17	[{'connected_gene': 'PSG8', 'score': 15.87}, {'connected_gene': 'PSG5', 'score': 2.26}, {'connected_gene': 'CEACAM1', 'score': 1.43}, {'connected_gene': 'GC19M042749', 'score': 0.44}, {'connected_gene': 'PSG3', 'score': 0.34}]
chr19	GH19I042765	42765668	42765727	0.5	[{'connected_gene': 'PSG8', 'score': 550.17}, {'connected_gene': 'GC19M042749', 'score': 0.77}, {'connected_gene': 'PSG3', 'score': 0.31}]
chr19	GH19I042735	42735600	42738140	0.77	[{'connected_gene': 'PSG8', 'score': 10.41}, {'connected_gene': 'PSG3', 'score': 0.77}, {'connected_gene': 'PIR38528', 'score': 0.26}]