PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000479862	[[68334359, 68334926], [68396002, 68396093], [68396913, 68397024], [68419021, 68419123], [68421751, 68421853], [68423775, 68423890], [68536410, 68536486], [68658248, 68658578]]	[[68423803, 68423890], [68536410, 68536486], [68658248, 68658364]]
ENST00000297769	[[68334404, 68334926], [68396002, 68396093], [68396913, 68397024], [68419021, 68419123], [68421751, 68421853], [68423775, 68423890], [68430157, 68430282], [68536410, 68536486], [68658248, 68658620]]	[[68334738, 68334926], [68396002, 68396093], [68396913, 68397024], [68419021, 68419123], [68421751, 68421841]]
ENST00000297770	[[68334407, 68334926], [68340281, 68340366], [68346272, 68346475], [68396002, 68396093], [68396913, 68397024], [68419021, 68419123], [68421751, 68421853], [68423775, 68423890], [68430157, 68430282], [68536410, 68536486], [68658248, 68658580]]	[[68334738, 68334926], [68340281, 68340366], [68346272, 68346475], [68396002, 68396093], [68396913, 68397024], [68419021, 68419123], [68421751, 68421853], [68423775, 68423890], [68430157, 68430282], [68536410, 68536486], [68658248, 68658364]]
ENST00000518549	[[68395516, 68396093], [68396913, 68397024], [68419021, 68419123], [68421751, 68421853], [68423775, 68423890], [68430157, 68430282], [68536410, 68536486], [68658248, 68658578]]	[[68395892, 68396093], [68396913, 68397024], [68419021, 68419123], [68421751, 68421853], [68423775, 68423890], [68430157, 68430282], [68536410, 68536486], [68658248, 68658364]]
NM_020361	[[68334404, 68334926], [68340281, 68340366], [68346272, 68346475], [68396002, 68396093], [68396913, 68397024], [68419021, 68419123], [68421751, 68421853], [68423775, 68423890], [68430157, 68430282], [68536410, 68536486], [68658248, 68658620]]	[[68334738, 68334926], [68340281, 68340366], [68346272, 68346475], [68396002, 68396093], [68396913, 68397024], [68419021, 68419123], [68421751, 68421853], [68423775, 68423890], [68430157, 68430282], [68536410, 68536486], [68658248, 68658364]]

Promoter

Chrom	Start	End	Description
chr8	68658362	68658375	CAGE_peak_2_at_CPA6_5end
chr8	68658484	68658491	CAGE_peak_3_at_CPA6_5end
chr8	68658582	68658647	CAGE_peak_1_at_CPA6_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr8	GH08I067748	67748327	67748452	0.28	[{'connected_gene': 'CPA6', 'score': 550.77}, {'connected_gene': 'NDUFS5P6', 'score': 0.15}]
chr8	GH08I067751	67751386	67751535	0.38	[{'connected_gene': 'CPA6', 'score': 0.77}, {'connected_gene': 'NDUFS5P6', 'score': 0.15}]
chr8	GH08I067795	67795106	67795215	0.46	[{'connected_gene': 'CPA6', 'score': 11.23}, {'connected_gene': 'NDUFS5P6', 'score': 0.23}]
chr8	GH08I067503	67503897	67507021	1.24	[{'connected_gene': 'CPA6', 'score': 10.23}, {'connected_gene': 'LOC105375886', 'score': 0.23}, {'connected_gene': 'RPL17P31', 'score': 0.15}]
chr8	GH08I067718	67718852	67722811	0.49	[{'connected_gene': 'CPA6', 'score': 11.63}, {'connected_gene': 'ENSG00000255130', 'score': 0.39}, {'connected_gene': 'PIR45809', 'score': 0.12}]
chr8	GH08I067740	67740946	67741095	0.31	[{'connected_gene': 'CPA6', 'score': 0.44}, {'connected_gene': 'ENSG00000255130', 'score': 0.44}]
chr8	GH08I067745	67745801	67746934	1.24	[{'connected_gene': 'CPA6', 'score': 550.77}, {'connected_gene': 'ENSG00000255130', 'score': 0.39}]
chr8	GH08I067737	67737626	67737755	0.73	[{'connected_gene': 'CPA6', 'score': 5.53}, {'connected_gene': 'ENSG00000255130', 'score': 0.44}]
chr8	GH08I067521	67521790	67523140	0.31	[{'connected_gene': 'LOC105375886', 'score': 0.29}, {'connected_gene': 'RPL17P31', 'score': 0.13}, {'connected_gene': 'CPA6', 'score': 0.07}]
chr8	GH08I067490	67490001	67490612	0.83	[{'connected_gene': 'LOC105375886', 'score': 0.2}, {'connected_gene': 'RPL17P31', 'score': 0.18}, {'connected_gene': 'CPA6', 'score': 0.07}]
chr8	GH08I067512	67512114	67513155	0.31	[{'connected_gene': 'LOC105375886', 'score': 0.26}, {'connected_gene': 'RPL17P31', 'score': 0.14}, {'connected_gene': 'CPA6', 'score': 0.07}]
chr8	GH08I067462	67462027	67463705	0.66	[{'connected_gene': 'RPL17P31', 'score': 0.22}, {'connected_gene': 'LOC105375886', 'score': 0.16}, {'connected_gene': 'CPA6', 'score': 0.06}]
chr8	GH08I067726	67726566	67728404	0.2	[{'connected_gene': 'ENSG00000255130', 'score': 0.44}, {'connected_gene': 'CPA6', 'score': 0.37}, {'connected_gene': 'PIR45809', 'score': 0.11}]
chr8	GH08I067692	67692306	67694078	0.82	[{'connected_gene': 'ENSG00000255130', 'score': 11.15}, {'connected_gene': 'CPA6', 'score': 11.07}, {'connected_gene': 'PIR45809', 'score': 0.14}]
chr8	GH08I067712	67712366	67712515	0.54	[{'connected_gene': 'ENSG00000255130', 'score': 0.34}, {'connected_gene': 'CPA6', 'score': 0.29}, {'connected_gene': 'PIR45809', 'score': 0.13}]
chr8	GH08I067730	67730506	67730675	0.31	[{'connected_gene': 'ENSG00000255130', 'score': 550.77}, {'connected_gene': 'CPA6', 'score': 0.37}, {'connected_gene': 'PIR45809', 'score': 0.11}]
chr8	GH08I067717	67717246	67717400	0.2	[{'connected_gene': 'ENSG00000255130', 'score': 0.37}, {'connected_gene': 'CPA6', 'score': 0.31}, {'connected_gene': 'PIR45809', 'score': 0.12}]
chr8	GH08I067602	67602189	67603382	1.2	[{'connected_gene': 'PIR45809', 'score': 0.37}, {'connected_gene': 'LOC105375886', 'score': 0.25}, {'connected_gene': 'ENSG00000255130', 'score': 0.13}, {'connected_gene': 'CPA6', 'score': 0.11}]
chr8	GH08I067587	67587334	67587569	0.33	[{'connected_gene': 'GC08M067585', 'score': 550.77}, {'connected_gene': 'PIR45809', 'score': 550.77}, {'connected_gene': 'LOC105375886', 'score': 0.29}, {'connected_gene': 'ENSG00000255130', 'score': 0.11}, {'connected_gene': 'CPA6', 'score': 0.1}]
chr8	GH08I067579	67579493	67580435	0.69	[{'connected_gene': 'GC08M067585', 'score': 0.44}, {'connected_gene': 'ENSG00000254253', 'score': 0.39}, {'connected_gene': 'LOC105375886', 'score': 0.34}, {'connected_gene': 'CPA6', 'score': 0.1}]