PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000246151	[[24104894, 24105203], [24105927, 24105971], [24106353, 24106431], [24112164, 24112269], [24112804, 24112913], [24113764, 24114722]]	[[24105005, 24105203], [24105927, 24105971], [24106353, 24106431], [24112164, 24112269], [24112804, 24112913], [24113764, 24113866]]
ENST00000415372	[[24105846, 24106431], [24112164, 24112269], [24112804, 24112868]]	[[24106390, 24106431], [24112164, 24112269], [24112804, 24112868]]
ENST00000374524	[[24111681, 24111801], [24112164, 24112269], [24112804, 24112913], [24113764, 24114722]]	[[24112183, 24112269], [24112804, 24112913], [24113764, 24113866]]
NM_020362	[[24104875, 24105203], [24105927, 24105971], [24106353, 24106431], [24112164, 24112269], [24112804, 24112913], [24113764, 24114722]]	[[24105005, 24105203], [24105927, 24105971], [24106353, 24106431], [24112164, 24112269], [24112804, 24112913], [24113764, 24113866]]

Promoter

Chrom	Start	End	Description
chr1	24104869	24104918	CAGE_peak_1_at_PITHD1_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr1	GH01I023807	23807611	23807760	0.6	[{'connected_gene': 'PITHD1', 'score': 12.41}, {'connected_gene': 'ELOA-AS1', 'score': 12.41}, {'connected_gene': 'PIR41142', 'score': 0.44}, {'connected_gene': 'GC01P023838', 'score': 0.29}, {'connected_gene': 'HMGCL', 'score': 0.29}]
chr1	GH01I023751	23751351	23751600	0.68	[{'connected_gene': 'PITHD1', 'score': 12.41}, {'connected_gene': 'ELOA-AS1', 'score': 12.41}, {'connected_gene': 'LYPLA2', 'score': 11.6}, {'connected_gene': 'GC01P023754', 'score': 0.77}, {'connected_gene': 'ELOA', 'score': 0.44}]
chr1	GH01I023750	23750851	23751000	0.2	[{'connected_gene': 'PITHD1', 'score': 12.41}, {'connected_gene': 'ELOA-AS1', 'score': 12.41}, {'connected_gene': 'LYPLA2', 'score': 11.6}, {'connected_gene': 'GC01P023754', 'score': 0.77}, {'connected_gene': 'ELOA', 'score': 0.44}]
chr1	GH01I023776	23776821	23780676	2.28	[{'connected_gene': 'PITHD1', 'score': 556.34}, {'connected_gene': 'ELOA-AS1', 'score': 550.77}, {'connected_gene': 'SRSF10', 'score': 22.17}, {'connected_gene': 'KDM1A', 'score': 14.07}, {'connected_gene': 'SRRM1', 'score': 12.23}, {'connected_gene': 'ELOA', 'score': 12.08}, {'connected_gene': 'FUCA1', 'score': 10.59}, {'connected_gene': 'LYPLA2', 'score': 0.39}]
chr1	GH01I023809	23809311	23811414	1.38	[{'connected_gene': 'FUCA1', 'score': 25.74}, {'connected_gene': 'PITHD1', 'score': 11.66}, {'connected_gene': 'ELOA-AS1', 'score': 11.66}, {'connected_gene': 'PIR41142', 'score': 0.44}, {'connected_gene': 'GC01P023838', 'score': 0.31}, {'connected_gene': 'HMGCL', 'score': 0.31}]
chr1	GH01I023895	23895002	23898120	1.12	[{'connected_gene': 'FUCA1', 'score': 18.55}, {'connected_gene': 'PITHD1', 'score': 10.9}, {'connected_gene': 'ELOA-AS1', 'score': 10.9}, {'connected_gene': 'SRSF10', 'score': 10.75}, {'connected_gene': 'BTBD6P1', 'score': 0.44}, {'connected_gene': 'GC01M023881', 'score': 0.39}, {'connected_gene': 'CNR2', 'score': 0.37}]
chr1	GH01I023899	23899151	23899320	0.83	[{'connected_gene': 'FUCA1', 'score': 12.93}, {'connected_gene': 'PITHD1', 'score': 10.9}, {'connected_gene': 'ELOA-AS1', 'score': 10.9}, {'connected_gene': 'SRSF10', 'score': 10.75}, {'connected_gene': 'BTBD6P1', 'score': 0.77}, {'connected_gene': 'CNR2', 'score': 0.39}, {'connected_gene': 'GC01M023881', 'score': 0.37}]