PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000476781	[[179306072, 179306783], [179310431, 179310527], [179311552, 179311683], [179316462, 179316559], [179319517, 179319578], [179320439, 179320585], [179322314, 179322442]]	[[179306659, 179306783], [179310431, 179310527], [179311552, 179311683], [179316462, 179316559], [179319517, 179319578], [179320439, 179320585], [179322314, 179322412]]
ENST00000259038	[[179306242, 179306783], [179310431, 179310527], [179311552, 179311683], [179316462, 179316559], [179319517, 179319578], [179320439, 179320525], [179322314, 179322428]]	[[179306659, 179306783], [179310431, 179310527], [179311552, 179311683], [179316462, 179316559], [179319517, 179319578], [179320439, 179320525], [179322314, 179322412]]
ENST00000392659	[[179306618, 179306783], [179310431, 179310527], [179311552, 179311683], [179316462, 179316559], [179319517, 179319578], [179322314, 179322437]]	[[179306659, 179306783], [179310431, 179310527], [179311552, 179311683], [179316462, 179316534]]
NM_020409	[[179306252, 179306783], [179310431, 179310527], [179311552, 179311683], [179316462, 179316559], [179319517, 179319578], [179320439, 179320585], [179322314, 179322434]]	[[179306659, 179306783], [179310431, 179310527], [179311552, 179311683], [179316462, 179316559], [179319517, 179319578], [179320439, 179320585], [179322314, 179322412]]
NM_177988	[[179306252, 179306783], [179310431, 179310527], [179311552, 179311683], [179316462, 179316559], [179319517, 179319578], [179322314, 179322434]]	[[179306659, 179306783], [179310431, 179310527], [179311552, 179311683], [179316462, 179316534]]

Promoter

Chrom	Start	End	Description
chr3	179322416	179322435	CAGE_peak_1_at_MRPL47_5end
chr3	179322436	179322447	CAGE_peak_2_at_MRPL47_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr3	GH03I179608	179608479	179609723	0.77	[{'connected_gene': 'USP13', 'score': 10.86}, {'connected_gene': 'MRPL47', 'score': 7.14}, {'connected_gene': 'NDUFB5', 'score': 6.51}, {'connected_gene': 'ENSG00000239096', 'score': 0.44}]
chr3	GH03I179591	179591265	179591643	0.27	[{'connected_gene': 'USP13', 'score': 9.93}, {'connected_gene': 'ENSG00000272660', 'score': 0.44}, {'connected_gene': 'MRPL47', 'score': 0.39}]
chr3	GH03I179603	179603388	179605805	2.03	[{'connected_gene': 'NDUFB5', 'score': 559.58}, {'connected_gene': 'MRPL47', 'score': 557.14}, {'connected_gene': 'TTC14', 'score': 12.09}, {'connected_gene': 'USP13', 'score': 10.94}, {'connected_gene': 'ACTL6A', 'score': 10.15}, {'connected_gene': 'MFN1', 'score': 10.07}, {'connected_gene': 'ENSG00000272660', 'score': 0.34}]
chr3	GH03I179626	179626740	179627826	0.38	[{'connected_gene': 'GC03P179625', 'score': 550.77}, {'connected_gene': 'USP13', 'score': 11.44}, {'connected_gene': 'NDUFB5', 'score': 8.76}, {'connected_gene': 'MRPL47', 'score': 5.77}, {'connected_gene': 'GC03P179640', 'score': 0.39}]
chr3	GH03I179544	179544382	179546067	0.38	[{'connected_gene': 'ENSG00000239255', 'score': 11.67}, {'connected_gene': 'GNB4', 'score': 11.67}, {'connected_gene': 'NDUFB5', 'score': 5.54}, {'connected_gene': 'MRPL47', 'score': 5.41}, {'connected_gene': 'ACTL6A', 'score': 0.37}, {'connected_gene': 'PIR62273', 'score': 0.22}]