PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000359358	[[30252633, 30254760], [30257135, 30257293], [30260131, 30260290], [30260371, 30260562], [30267117, 30267196], [30275425, 30275515], [30321890, 30322012], [30349607, 30350597], [30352629, 30353025]]	[[30254619, 30254760], [30257135, 30257293], [30260131, 30260290], [30260371, 30260562], [30267117, 30267196], [30275425, 30275515], [30321890, 30322012], [30349607, 30350554]]
ENST00000358095	[[30313649, 30314208], [30321890, 30322012], [30349607, 30350597], [30352629, 30352842]]	[[30314110, 30314208], [30321890, 30322012], [30349607, 30350554]]
ENST00000583263	[[30349953, 30350597], [30352009, 30352130]]	[[30349953, 30350597], [30352009, 30352047]]
NM_020805	[[30252635, 30254760], [30257135, 30257293], [30260131, 30260290], [30260371, 30260562], [30267117, 30267196], [30275425, 30275515], [30321890, 30322012], [30349607, 30350597], [30352629, 30352974]]	[[30254619, 30254760], [30257135, 30257293], [30260131, 30260290], [30260371, 30260562], [30267117, 30267196], [30275425, 30275515], [30321890, 30322012], [30349607, 30350554]]

Promoter

Chrom	Start	End	Description
chr18	30350270	30350285	CAGE_peak_1_at_KLHL14_5end
chr18	30350293	30350305	CAGE_peak_2_at_KLHL14_5end
chr18	30353111	30353126	CAGE_peak_7_at_KLHL14_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr18	GH18I032773	32773149	32773208	0.68	[{'connected_gene': 'KLHL14', 'score': 550.77}, {'connected_gene': 'LOC105372055', 'score': 0.77}, {'connected_gene': 'RPS27P28', 'score': 0.44}]
chr18	GH18I032774	32773242	32773513	0.58	[{'connected_gene': 'KLHL14', 'score': 550.77}, {'connected_gene': 'LOC105372055', 'score': 0.77}, {'connected_gene': 'RPS27P28', 'score': 0.44}]
chr18	GH18I032759	32759830	32761751	0.49	[{'connected_gene': 'KLHL14', 'score': 4.9}, {'connected_gene': 'LOC105372055', 'score': 0.44}, {'connected_gene': 'GC18M032739', 'score': 0.37}]
chr18	GH18I032768	32768110	32772949	1.87	[{'connected_gene': 'KLHL14', 'score': 555.96}, {'connected_gene': 'LOC105372055', 'score': 550.77}]
chr18	GH18I032801	32801873	32805172	1.11	[{'connected_gene': 'GC18M032787', 'score': 550.77}, {'connected_gene': 'KLHL14', 'score': 16.84}, {'connected_gene': 'LOC105372058', 'score': 0.31}]
chr18	GH18I032714	32714658	32714827	0.72	[{'connected_gene': 'GC18M032739', 'score': 0.31}, {'connected_gene': 'KLHL14', 'score': 0.22}, {'connected_gene': 'ENSG00000263688', 'score': 0.12}]
chr18	GH18I032730	32730180	32731200	1.29	[{'connected_gene': 'GC18M032739', 'score': 0.39}, {'connected_gene': 'KLHL14', 'score': 0.26}, {'connected_gene': 'ENSG00000263688', 'score': 0.11}]
chr18	GH18I032743	32742677	32742931	0.63	[{'connected_gene': 'GC18M032739', 'score': 550.77}, {'connected_gene': 'KLHL14', 'score': 12.4}, {'connected_gene': 'ENSG00000263688', 'score': 0.1}]
chr18	GH18I032696	32696475	32696686	0.4	[{'connected_gene': 'GC18M032739', 'score': 0.25}, {'connected_gene': 'KLHL14', 'score': 0.18}, {'connected_gene': 'ENSG00000263688', 'score': 0.13}]
chr18	GH18I032742	32742247	32742514	0.51	[{'connected_gene': 'GC18M032739', 'score': 550.77}, {'connected_gene': 'KLHL14', 'score': 16.97}, {'connected_gene': 'ENSG00000263688', 'score': 0.1}]
chr18	GH18I032698	32698318	32698646	0.66	[{'connected_gene': 'GC18M032739', 'score': 0.25}, {'connected_gene': 'KLHL14', 'score': 0.19}, {'connected_gene': 'ENSG00000263688', 'score': 0.13}]