PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000295746	[[108268715, 108270166], [108271080, 108271220], [108272494, 108272577], [108273222, 108273336], [108276064, 108276261], [108278603, 108278714], [108278800, 108278875], [108279495, 108279688], [108281972, 108282091], [108284201, 108284301], [108285343, 108285485], [108287001, 108287161], [108288235, 108288454], [108295117, 108295193], [108298127, 108298273], [108298412, 108298535], [108300261, 108300358], [108300954, 108301049], [108301823, 108301930], [108303911, 108304059], [108308120, 108308299]]	[[108269995, 108270166], [108271080, 108271220], [108272494, 108272577], [108273222, 108273336], [108276064, 108276261], [108278603, 108278714], [108278800, 108278875], [108279495, 108279688], [108281972, 108282091], [108284201, 108284301], [108285343, 108285485], [108287001, 108287161], [108288235, 108288454], [108295117, 108295193], [108298127, 108298273], [108298412, 108298535], [108300261, 108300358], [108300954, 108301049], [108301823, 108301930], [108303911, 108304059], [108308120, 108308222]]
ENST00000491772	[[108268832, 108270166], [108271080, 108271220], [108272494, 108272577], [108273222, 108273336], [108276064, 108276261], [108278603, 108278714], [108278800, 108278875], [108279495, 108279688], [108281972, 108282091], [108284201, 108284301], [108285343, 108285485], [108287001, 108287161], [108288235, 108288454], [108295117, 108295193], [108298127, 108298273], [108298412, 108298535], [108300261, 108300358], [108300954, 108301049], [108301823, 108301930], [108303911, 108304059], [108304512, 108304610]]	[[108269995, 108270166], [108271080, 108271220], [108272494, 108272577], [108273222, 108273336], [108276064, 108276261], [108278603, 108278714], [108278800, 108278875], [108279495, 108279688], [108281972, 108282091], [108284201, 108284301], [108285343, 108285485], [108287001, 108287161], [108288235, 108288454], [108295117, 108295193], [108298127, 108298273], [108298412, 108298535], [108300261, 108300333]]
ENST00000481530	[[108269962, 108270166], [108271080, 108271220], [108272494, 108272577], [108273222, 108273336], [108276064, 108276261], [108278603, 108278714], [108278800, 108278875], [108279495, 108279688], [108281972, 108282091], [108284201, 108284301], [108285343, 108285485], [108287001, 108287161], [108288235, 108288454], [108295117, 108295193], [108298127, 108298273], [108298412, 108298535], [108300261, 108300358], [108300954, 108300985], [108301823, 108301930], [108303911, 108304059], [108308120, 108308299]]	[[108300976, 108300985], [108301823, 108301930], [108303911, 108304059], [108308120, 108308222]]
ENST00000487834	[[108279581, 108279688], [108281968, 108282091], [108284201, 108284301], [108285343, 108285485], [108287001, 108287161], [108288235, 108288454], [108295117, 108295193], [108298127, 108298273], [108298412, 108298535], [108300261, 108300358], [108300954, 108301049], [108301823, 108301930], [108303911, 108304059], [108308120, 108308491]]	None
ENST00000468953	[[108300321, 108300358], [108300954, 108301049], [108301823, 108301930], [108303911, 108304059], [108304512, 108304596], [108308120, 108308303]]	[[108304551, 108304596], [108308120, 108308222]]
ENST00000461666	[[108303706, 108304059], [108308120, 108308278]]	None

Promoter

Chrom	Start	End	Description
chr3	108308241	108308316	CAGE_peak_1_at_KIAA1524_5end
chr3	108308467	108308505	CAGE_peak_2_at_KIAA1524_5end
chr3	108308695	108308704	CAGE_peak_4_at_KIAA1524_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr3	GH03I108587	108587716	108591058	2.05	[{'connected_gene': 'DZIP3', 'score': 567.61}, {'connected_gene': 'CIP2A', 'score': 558.5}, {'connected_gene': 'ENSG00000276763', 'score': 0.39}]
chr3	GH03I108602	108602170	108604584	1.13	[{'connected_gene': 'DZIP3', 'score': 559.06}, {'connected_gene': 'MYH15', 'score': 5.61}, {'connected_gene': 'CIP2A', 'score': 0.39}, {'connected_gene': 'LOC105374033', 'score': 0.13}]
chr3	GH03I108470	108470518	108474162	0.85	[{'connected_gene': 'DZIP3', 'score': 13.44}, {'connected_gene': 'MYH15', 'score': 5.78}, {'connected_gene': 'CIP2A', 'score': 5.57}, {'connected_gene': 'RPL13P8', 'score': 4.66}, {'connected_gene': 'GC03M108465', 'score': 0.22}, {'connected_gene': 'GC03M108377', 'score': 0.18}]
chr3	GH03I107969	107969570	107971222	0.97	[{'connected_gene': 'CIP2A', 'score': 10.42}, {'connected_gene': 'LINC00636', 'score': 6.16}, {'connected_gene': 'ENSG00000279277', 'score': 0.2}]
chr3	GH03I108552	108552694	108552843	0.46	[{'connected_gene': 'MYH15', 'score': 0.77}, {'connected_gene': 'GC03P108587', 'score': 0.34}, {'connected_gene': 'CIP2A', 'score': 0.28}]
chr3	GH03I108662	108662294	108662423	0.62	[{'connected_gene': 'LOC105374033', 'score': 0.2}, {'connected_gene': 'CIP2A', 'score': 0.19}, {'connected_gene': 'DZIP3', 'score': 0.19}]