PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000370598	[[69345258, 69345892], [69347282, 69347454], [69348552, 69349324], [69640450, 69640561], [69646410, 69646572], [69653721, 69653886], [69665915, 69666080], [69666536, 69666701], [69684654, 69684756], [69685125, 69685232], [69703659, 69703854], [69723929, 69723998], [69728282, 69728391], [69758076, 69758226], [69759162, 69759238], [69772825, 69772928], [69785886, 69785930], [69943181, 69943308], [69944923, 69945027], [69949015, 69949118], [70034763, 70034914], [70037711, 70037781], [70040397, 70040464], [70042814, 70042900], [70048807, 70048906], [70049224, 70049396], [70064124, 70064220], [70065712, 70065752], [70070760, 70071404], [70082297, 70082333], [70092722, 70092827], [70098594, 70099403]]	[[69348567, 69349324], [69640450, 69640561], [69646410, 69646572], [69653721, 69653886], [69665915, 69666080], [69666536, 69666701], [69684654, 69684756], [69685125, 69685232], [69703659, 69703854], [69723929, 69723998], [69728282, 69728391], [69758076, 69758226], [69759162, 69759238], [69772825, 69772928], [69785886, 69785930], [69943181, 69943308], [69944923, 69945027], [69949015, 69949118], [70034763, 70034914], [70037711, 70037781], [70040397, 70040464], [70042814, 70042900], [70048807, 70048906], [70049224, 70049396], [70064124, 70064220], [70065712, 70065752], [70070760, 70071404], [70082297, 70082333], [70092722, 70092827], [70098594, 70098783]]
ENST00000238918	[[69942297, 69942521], [69943181, 69943308], [69944923, 69945027], [69949015, 69949118], [70034763, 70034914], [70037711, 70037781], [70040397, 70040464], [70042814, 70042900], [70048807, 70048906], [70049224, 70049396], [70064124, 70064220], [70065712, 70065752], [70070760, 70071404], [70082297, 70082333], [70092722, 70092827], [70098594, 70099397]]	[[69942423, 69942521], [69943181, 69943308], [69944923, 69945027], [69949015, 69949118], [70034763, 70034914], [70037711, 70037781], [70040397, 70040464], [70042814, 70042900], [70048807, 70048906], [70049224, 70049396], [70064124, 70064220], [70065712, 70065752], [70070760, 70071404], [70082297, 70082333], [70092722, 70092827], [70098594, 70098783]]
ENST00000603207	[[69942925, 69943052], [69943181, 69943308], [69944923, 69945027], [69949015, 69949118], [70034763, 70034834]]	[[69943020, 69943052], [69943181, 69943308], [69944923, 69945027], [69949015, 69949118], [70034763, 70034834]]
ENST00000604969	[[69942925, 69943308], [69944923, 69945027], [69949015, 69949118]]	[[69944926, 69945027], [69949015, 69949118]]
ENST00000546190	[[70041759, 70041848], [70042814, 70042900], [70048807, 70048906], [70049224, 70049396], [70064124, 70064220], [70065712, 70065752], [70070760, 70071404], [70082297, 70082333], [70092722, 70092827], [70098594, 70099109]]	[[70042820, 70042900], [70048807, 70048906], [70049224, 70049396], [70064124, 70064220], [70065712, 70065752], [70070760, 70071404], [70082297, 70082333], [70092722, 70092827], [70098594, 70098783]]
NM_001704	[[69345631, 69345892], [69347282, 69347454], [69348552, 69349324], [69640450, 69640561], [69646410, 69646572], [69653721, 69653886], [69665915, 69666080], [69666536, 69666701], [69684654, 69684756], [69685125, 69685232], [69703659, 69703854], [69723929, 69723998], [69728282, 69728391], [69758076, 69758226], [69759162, 69759238], [69772825, 69772928], [69785886, 69785930], [69943181, 69943308], [69944923, 69945027], [69949015, 69949118], [70034763, 70034914], [70037711, 70037781], [70040397, 70040464], [70042814, 70042900], [70048807, 70048906], [70049224, 70049396], [70064124, 70064220], [70065712, 70065752], [70070760, 70071404], [70082297, 70082333], [70092722, 70092827], [70098594, 70099403]]	[[69348567, 69349324], [69640450, 69640561], [69646410, 69646572], [69653721, 69653886], [69665915, 69666080], [69666536, 69666701], [69684654, 69684756], [69685125, 69685232], [69703659, 69703854], [69723929, 69723998], [69728282, 69728391], [69758076, 69758226], [69759162, 69759238], [69772825, 69772928], [69785886, 69785930], [69943181, 69943308], [69944923, 69945027], [69949015, 69949118], [70034763, 70034914], [70037711, 70037781], [70040397, 70040464], [70042814, 70042900], [70048807, 70048906], [70049224, 70049396], [70064124, 70064220], [70065712, 70065752], [70070760, 70071404], [70082297, 70082333], [70092722, 70092827], [70098594, 70098783]]

Promoter

Chrom	Start	End	Description
chr6	69344939	69344981	CAGE_peak_5_at_BAI3_5end
chr6	69345166	69345259	CAGE_peak_1_at_BAI3_5end
chr6	69345272	69345284	CAGE_peak_3_at_BAI3_5end
chr6	69345285	69345308	CAGE_peak_2_at_BAI3_5end
chr6	69345310	69345317	CAGE_peak_9_at_BAI3_5end
chr6	69345368	69345379	CAGE_peak_7_at_BAI3_5end
chr6	69345807	69345828	CAGE_peak_4_at_BAI3_5end
chr6	69345833	69345845	CAGE_peak_8_at_BAI3_5end
chr6	69345847	69345866	CAGE_peak_6_at_BAI3_5end
chr6	69942384	69942394	CAGE_peak_16_at_BAI3_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr6	GH06I068639	68639586	68640800	1.12	[{'connected_gene': 'ADGRB3', 'score': 11.24}, {'connected_gene': 'LOC101928307', 'score': 10.48}, {'connected_gene': 'GC06M068665', 'score': 0.31}]
chr6	GH06I068633	68633759	68636400	2.11	[{'connected_gene': 'ADGRB3', 'score': 567.57}, {'connected_gene': 'LOC101928307', 'score': 563.71}]
chr6	GH06I068761	68761402	68761842	0.75	[{'connected_gene': 'ADGRB3', 'score': 25.11}, {'connected_gene': 'GC06P068946', 'score': 0.34}, {'connected_gene': 'GC06P069165', 'score': 0.05}]
chr6	GH06I068717	68717969	68718961	0.64	[{'connected_gene': 'ADGRB3', 'score': 7.29}, {'connected_gene': 'GC06P068946', 'score': 0.34}, {'connected_gene': 'GC06M068665', 'score': 0.23}]
chr6	GH06I069093	69093490	69093881	0.24	[{'connected_gene': 'ADGRB3', 'score': 3.94}, {'connected_gene': 'GC06P069165', 'score': 0.19}, {'connected_gene': 'GC06P068946', 'score': 0.05}]
chr6	GH06I068847	68847847	68848154	0.22	[{'connected_gene': 'ADGRB3', 'score': 7.55}, {'connected_gene': 'GC06P068946', 'score': 0.14}, {'connected_gene': 'GC06P069165', 'score': 0.06}]
chr6	GH06I068920	68920627	68920937	0.35	[{'connected_gene': 'ADGRB3', 'score': 7.96}, {'connected_gene': 'GC06P068946', 'score': 0.1}, {'connected_gene': 'GC06P069165', 'score': 0.07}]
chr6	GH06I068653	68653659	68655900	0.69	[{'connected_gene': 'ADGRB3', 'score': 6.43}, {'connected_gene': 'GC06M068665', 'score': 0.39}]
chr6	GH06I068642	68642528	68643975	0.31	[{'connected_gene': 'ADGRB3', 'score': 0.44}, {'connected_gene': 'GC06M068665', 'score': 0.34}]
chr6	GH06I068753	68753725	68754046	0.24	[{'connected_gene': 'LOC101928307', 'score': 13.46}, {'connected_gene': 'ADGRB3', 'score': 4.35}, {'connected_gene': 'GC06P068946', 'score': 0.39}, {'connected_gene': 'GC06P069165', 'score': 0.05}]
chr6	GH06I068777	68777700	68778074	0.49	[{'connected_gene': 'LOC101928307', 'score': 8.47}, {'connected_gene': 'ADGRB3', 'score': 2.24}, {'connected_gene': 'GC06P068946', 'score': 0.28}, {'connected_gene': 'GC06P069165', 'score': 0.05}]
chr6	GH06I068655	68655907	68657676	0.62	[{'connected_gene': 'LOC101928307', 'score': 13.2}, {'connected_gene': 'GC06M068665', 'score': 0.44}, {'connected_gene': 'ADGRB3', 'score': 0.34}]
chr6	GH06I068651	68651572	68652430	1	[{'connected_gene': 'LOC101928307', 'score': 5.09}, {'connected_gene': 'GC06M068665', 'score': 0.39}, {'connected_gene': 'ADGRB3', 'score': 0.37}]
chr6	GH06I069389	69389070	69389510	0.4	[{'connected_gene': 'PIR49916', 'score': 0.37}, {'connected_gene': 'GC06P069165', 'score': 0.07}, {'connected_gene': 'ADGRB3', 'score': 0.03}]
chr6	GH06I069215	69215731	69217667	0.51	[{'connected_gene': 'GC06P069165', 'score': 0.23}, {'connected_gene': 'PIR49916', 'score': 0.08}, {'connected_gene': 'ADGRB3', 'score': 0.03}]
chr6	GH06I069219	69219879	69221267	0.31	[{'connected_gene': 'GC06P069165', 'score': 0.23}, {'connected_gene': 'PIR49916', 'score': 0.09}, {'connected_gene': 'ADGRB3', 'score': 0.03}]
chr6	GH06I068967	68967638	68968386	0.89	[{'connected_gene': 'GC06P069165', 'score': 0.08}, {'connected_gene': 'GC06P068946', 'score': 0.07}, {'connected_gene': 'ADGRB3', 'score': 0.06}]
chr6	GH06I069090	69090209	69090358	0.52	[{'connected_gene': 'GC06P069165', 'score': 0.18}, {'connected_gene': 'GC06P068946', 'score': 0.05}, {'connected_gene': 'ADGRB3', 'score': 0.05}]
chr6	GH06I069195	69195520	69195538	0.22	[{'connected_gene': 'GC06P069165', 'score': 0.31}, {'connected_gene': 'PIR49916', 'score': 0.08}, {'connected_gene': 'ADGRB3', 'score': 0.03}]
chr6	GH06I069233	69233009	69233118	0.95	[{'connected_gene': 'GC06P069165', 'score': 0.2}, {'connected_gene': 'PIR49916', 'score': 0.1}, {'connected_gene': 'ADGRB3', 'score': 0.03}]