Visualization of regulatory element with DNMs in transcripts


Visualization of de novo variants in transcripts


Visualization of original de novo CNV set
   There is no corresponding data published yet, we will update it when such data available.
Transcripts
Transcript ID Transcript exon region Coding exon region
ENST00000577646 [[38465443, 38465538], [38482726, 38482803], [38487108, 38487648], [38504567, 38504588]] [[38487470, 38487648], [38504567, 38504588]]
ENST00000254066 [[38465445, 38465538], [38487108, 38487648], [38504567, 38504716], [38506035, 38506177], [38508161, 38508322], [38508582, 38508759], [38510553, 38510758], [38511514, 38511673], [38512260, 38513048]] [[38487470, 38487648], [38504567, 38504716], [38506035, 38506177], [38508161, 38508322], [38508582, 38508759], [38510553, 38510758], [38511514, 38511673], [38512260, 38512478]]
ENST00000394089 [[38474532, 38474700], [38487108, 38487648], [38504567, 38504716], [38506035, 38506177], [38508161, 38508322], [38508582, 38508759], [38510553, 38510758], [38511514, 38511673], [38512260, 38512583]] [[38487470, 38487648], [38504567, 38504716], [38506035, 38506177], [38508161, 38508322], [38508582, 38508759], [38510553, 38510758], [38511514, 38511673], [38512260, 38512478]]
ENST00000425707 [[38474536, 38474700], [38487108, 38487648], [38508161, 38508322], [38508582, 38508759], [38510553, 38510758], [38511514, 38511673], [38512260, 38513094]] [[38487470, 38487648], [38508161, 38508322], [38508582, 38508759], [38510553, 38510758], [38511514, 38511673], [38512260, 38512478]]
ENST00000582914 [[38479242, 38479511], [38487108, 38487420]] None
ENST00000394086 [[38497639, 38497867], [38504567, 38504716], [38506035, 38506177], [38508161, 38508322], [38508582, 38508759], [38510553, 38510758], [38511514, 38511673], [38512260, 38513047]] [[38497641, 38497867], [38504567, 38504716], [38506035, 38506177], [38508161, 38508322], [38508582, 38508759], [38510553, 38510758], [38511514, 38511673], [38512260, 38512478]]
ENST00000394081 [[38498614, 38499119], [38504567, 38504716], [38506035, 38506177], [38508161, 38508322], [38508582, 38508759], [38510553, 38510758], [38511514, 38511673], [38512260, 38513047]] [[38498956, 38499119], [38504567, 38504716], [38506035, 38506177], [38508161, 38508322], [38508582, 38508759], [38510553, 38510758], [38511514, 38511673], [38512260, 38512478]]
ENST00000579727 [[38498650, 38498958], [38499047, 38499119], [38504567, 38504716], [38506035, 38506070]] None
ENST00000475125 [[38501492, 38501568], [38504567, 38504716], [38506035, 38506177], [38508161, 38508322], [38508582, 38508759], [38510553, 38510661]] [[38506065, 38506177], [38508161, 38508322], [38508582, 38508759], [38510553, 38510661]]
ENST00000420042 [[38507638, 38507783], [38508161, 38508322], [38508582, 38508759], [38510553, 38510758], [38511514, 38511673], [38512260, 38512465]] None
NM_000964 [[38465422, 38465538], [38487108, 38487648], [38504567, 38504716], [38506035, 38506177], [38508161, 38508322], [38508582, 38508759], [38510553, 38510758], [38511514, 38511673], [38512260, 38513895]] [[38487470, 38487648], [38504567, 38504716], [38506035, 38506177], [38508161, 38508322], [38508582, 38508759], [38510553, 38510758], [38511514, 38511673], [38512260, 38512478]]
NM_001145302 [[38474472, 38474700], [38487108, 38487648], [38508161, 38508322], [38508582, 38508759], [38510553, 38510758], [38511514, 38511673], [38512260, 38513895]] [[38487470, 38487648], [38508161, 38508322], [38508582, 38508759], [38510553, 38510758], [38511514, 38511673], [38512260, 38512478]]
NM_001145301 [[38474472, 38474700], [38487108, 38487648], [38504567, 38504716], [38506035, 38506177], [38508161, 38508322], [38508582, 38508759], [38510553, 38510758], [38511514, 38511673], [38512260, 38513895]] [[38487470, 38487648], [38504567, 38504716], [38506035, 38506177], [38508161, 38508322], [38508582, 38508759], [38510553, 38510758], [38511514, 38511673], [38512260, 38512478]]
NM_001024809 [[38498270, 38499119], [38504567, 38504716], [38506035, 38506177], [38508161, 38508322], [38508582, 38508759], [38510553, 38510758], [38511514, 38511673], [38512260, 38513895]] [[38498956, 38499119], [38504567, 38504716], [38506035, 38506177], [38508161, 38508322], [38508582, 38508759], [38510553, 38510758], [38511514, 38511673], [38512260, 38512478]]
Promoter
Chrom Start End Description
chr17 38465413 38465438 CAGE_peak_5_at_RARA_5end
chr17 38465441 38465481 CAGE_peak_6_at_RARA_5end
chr17 38474489 38474548 CAGE_peak_1_at_RARA_5end
chr17 38487239 38487261 CAGE_peak_12_at_RARA_5end
chr17 38487563 38487578 CAGE_peak_10_at_RARA_5end
chr17 38497640 38497647 CAGE_peak_27_at_RARA_5end
chr17 38497662 38497713 CAGE_peak_4_at_RARA_5end
chr17 38497715 38497734 CAGE_peak_8_at_RARA_5end
chr17 38497874 38497884 CAGE_peak_30_at_RARA_5end
chr17 38498236 38498251 CAGE_peak_24_at_RARA_5end
chr17 38498402 38498445 CAGE_peak_3_at_RARA_5end
chr17 38498510 38498540 CAGE_peak_7_at_RARA_5end
chr17 38498594 38498661 CAGE_peak_2_at_RARA_5end
chr17 38501500 38501517 CAGE_peak_13_at_RARA_5end
chr17 38504601 38504634 CAGE_peak_9_at_RARA_5end
Enhancer
Chrom Start End Genehancer ID Score Attributes
chr17 GH17I040436 40436909 40438172 1.01 [{'connected_gene': 'CDC6', 'score': 10.19}, {'connected_gene': 'RARA', 'score': 9.56}, {'connected_gene': 'ENSG00000266208', 'score': 9.4}, {'connected_gene': 'RARA-AS1', 'score': 5.77}, {'connected_gene': 'GC17M040441', 'score': 0.77}, {'connected_gene': 'GC17M040417', 'score': 0.37}]
chr17 GH17I040285 40285940 40289308 2.27 [{'connected_gene': 'CDC6', 'score': 550.77}, {'connected_gene': 'CDK12', 'score': 33.13}, {'connected_gene': 'RARA', 'score': 24.27}, {'connected_gene': 'MSL1', 'score': 24.0}, {'connected_gene': 'MED1', 'score': 23.27}, {'connected_gene': 'SMARCE1', 'score': 21.86}, {'connected_gene': 'ENSG00000266208', 'score': 9.42}, {'connected_gene': 'WIPF2', 'score': 4.78}, {'connected_gene': 'PIR47746', 'score': 0.44}, {'connected_gene': 'GC17P040282', 'score': 0.44}, {'connected_gene': 'GC17P040270', 'score': 0.37}]
chr17 GH17I040088 40088142 40102552 2.8 [{'connected_gene': 'NR1D1', 'score': 552.12}, {'connected_gene': 'CDK12', 'score': 55.71}, {'connected_gene': 'MED1', 'score': 46.52}, {'connected_gene': 'SMARCE1', 'score': 43.23}, {'connected_gene': 'MSL1', 'score': 35.27}, {'connected_gene': 'MED24', 'score': 18.58}, {'connected_gene': 'GSDMA', 'score': 15.4}, {'connected_gene': 'CCR7', 'score': 11.95}, {'connected_gene': 'THRA', 'score': 11.48}, {'connected_gene': 'RPL19', 'score': 10.62}, {'connected_gene': 'SNORD124', 'score': 10.61}, {'connected_gene': 'STARD3', 'score': 10.52}, {'connected_gene': 'TOP2A', 'score': 9.99}, {'connected_gene': 'ENSG00000266208', 'score': 5.99}, {'connected_gene': 'RARA', 'score': 5.19}, {'connected_gene': 'PGAP3', 'score': 5.02}, {'connected_gene': 'KRT24', 'score': 4.11}, {'connected_gene': 'GRB7', 'score': 2.16}, {'connected_gene': 'WIPF2', 'score': 1.49}, {'connected_gene': 'GC17P040082', 'score': 0.39}]
chr17 GH17I040102 40102797 40116135 1.83 [{'connected_gene': 'MED1', 'score': 66.07}, {'connected_gene': 'CDK12', 'score': 65.5}, {'connected_gene': 'SMARCE1', 'score': 54.2}, {'connected_gene': 'MSL1', 'score': 49.71}, {'connected_gene': 'MED24', 'score': 38.1}, {'connected_gene': 'RARA', 'score': 26.57}, {'connected_gene': 'RPL19', 'score': 20.09}, {'connected_gene': 'SNORD124', 'score': 16.41}, {'connected_gene': 'CASC3', 'score': 11.83}, {'connected_gene': 'THRA', 'score': 11.22}, {'connected_gene': 'IGFBP4', 'score': 10.8}, {'connected_gene': 'CDC6', 'score': 9.63}, {'connected_gene': 'ENSG00000266208', 'score': 9.3}, {'connected_gene': 'GSDMA', 'score': 5.27}, {'connected_gene': 'NR1D1', 'score': 2.07}, {'connected_gene': 'WIPF2', 'score': 1.65}, {'connected_gene': 'ENSG00000279199', 'score': 0.44}]
chr17 GH17I039401 39400304 39402801 2.05 [{'connected_gene': 'FBXL20', 'score': 550.77}, {'connected_gene': 'ENSG00000266469', 'score': 550.77}, {'connected_gene': 'MED1', 'score': 20.83}, {'connected_gene': 'CDK12', 'score': 18.5}, {'connected_gene': 'THRA', 'score': 15.83}, {'connected_gene': 'MSL1', 'score': 13.87}, {'connected_gene': 'LOC105371762', 'score': 13.71}, {'connected_gene': 'RARA', 'score': 13.11}, {'connected_gene': 'SNORA21', 'score': 9.76}, {'connected_gene': 'SNORD124', 'score': 9.7}, {'connected_gene': 'PGAP3', 'score': 5.98}, {'connected_gene': 'STARD3', 'score': 4.43}, {'connected_gene': 'GC17M039369', 'score': 0.29}]
chr17 GH17I040526 40526809 40526938 0.2 [{'connected_gene': 'TNS4', 'score': 12.26}, {'connected_gene': 'TOP2A', 'score': 11.13}, {'connected_gene': 'GJD3', 'score': 10.89}, {'connected_gene': 'RARA', 'score': 9.75}, {'connected_gene': 'LOC101059954', 'score': 0.77}, {'connected_gene': 'ENSG00000266088', 'score': 0.44}, {'connected_gene': 'GC17P040542', 'score': 0.37}]
chr17 GH17I040515 40515282 40524858 1.67 [{'connected_gene': 'TOP2A', 'score': 12.88}, {'connected_gene': 'CDC6', 'score': 11.96}, {'connected_gene': 'CCR7', 'score': 11.32}, {'connected_gene': 'IGFBP4', 'score': 11.27}, {'connected_gene': 'RPL23AP75', 'score': 11.26}, {'connected_gene': 'GJD3', 'score': 11.23}, {'connected_gene': 'RARA', 'score': 9.78}, {'connected_gene': 'SMARCE1', 'score': 5.95}, {'connected_gene': 'PPIAP54', 'score': 4.74}, {'connected_gene': 'TNS4', 'score': 4.38}, {'connected_gene': 'KRT24', 'score': 3.49}, {'connected_gene': 'TMEM99', 'score': 1.83}, {'connected_gene': 'LOC105371773', 'score': 0.77}, {'connected_gene': 'ENSG00000266088', 'score': 0.77}, {'connected_gene': 'LOC101059954', 'score': 0.77}]
chr17 GH17I040415 40415241 40419191 2.04 [{'connected_gene': 'TOP2A', 'score': 550.77}, {'connected_gene': 'GC17M040417', 'score': 550.77}, {'connected_gene': 'MED1', 'score': 37.83}, {'connected_gene': 'CDK12', 'score': 36.49}, {'connected_gene': 'RARA', 'score': 23.23}, {'connected_gene': 'SMARCE1', 'score': 21.07}, {'connected_gene': 'SNORD124', 'score': 14.25}, {'connected_gene': 'MSL1', 'score': 13.91}, {'connected_gene': 'RPL23AP75', 'score': 11.63}, {'connected_gene': 'IGFBP4', 'score': 11.61}, {'connected_gene': 'ENSG00000266208', 'score': 8.11}, {'connected_gene': 'RARA-AS1', 'score': 4.87}, {'connected_gene': 'GC17P040406', 'score': 0.39}]
chr17 GH17I040419 40419203 40420358 1.11 [{'connected_gene': 'TOP2A', 'score': 550.77}, {'connected_gene': 'GC17M040417', 'score': 550.77}, {'connected_gene': 'RPL23AP75', 'score': 11.99}, {'connected_gene': 'IGFBP4', 'score': 11.99}, {'connected_gene': 'RARA', 'score': 9.81}, {'connected_gene': 'GC17M040441', 'score': 0.34}]
chr17 GH17I040618 40618737 40620867 1.55 [{'connected_gene': 'SMARCE1', 'score': 34.42}, {'connected_gene': 'RARA', 'score': 4.11}, {'connected_gene': 'CCR7', 'score': 3.28}, {'connected_gene': 'WIPF2', 'score': 1.82}, {'connected_gene': 'GC17M040594', 'score': 0.77}, {'connected_gene': 'PIR34828', 'score': 0.44}]
chr17 GH17I040528 40528730 40544482 1.82 [{'connected_gene': 'SMARCE1', 'score': 25.74}, {'connected_gene': 'IGFBP4', 'score': 22.37}, {'connected_gene': 'MED24', 'score': 19.56}, {'connected_gene': 'CCR7', 'score': 16.91}, {'connected_gene': 'SNORD124', 'score': 16.27}, {'connected_gene': 'RARA', 'score': 12.39}, {'connected_gene': 'TOP2A', 'score': 11.65}, {'connected_gene': 'RPL23AP75', 'score': 11.63}, {'connected_gene': 'CDC6', 'score': 10.25}, {'connected_gene': 'GRB7', 'score': 4.55}, {'connected_gene': 'CASC3', 'score': 1.45}, {'connected_gene': 'GC17P040542', 'score': 0.44}, {'connected_gene': 'LOC101059954', 'score': 0.39}, {'connected_gene': 'GC17M040528', 'score': 0.39}]
chr17 GH17I040601 40601570 40609705 1.55 [{'connected_gene': 'SMARCE1', 'score': 37.86}, {'connected_gene': 'CCR7', 'score': 19.79}, {'connected_gene': 'KRT222', 'score': 10.31}, {'connected_gene': 'RAPGEFL1', 'score': 6.02}, {'connected_gene': 'RARA', 'score': 1.93}, {'connected_gene': 'CASC3', 'score': 1.72}, {'connected_gene': 'KRTAP3-2', 'score': 1.16}, {'connected_gene': 'WIPF2', 'score': 1.14}, {'connected_gene': 'ENSG00000279775', 'score': 0.44}, {'connected_gene': 'GC17M040594', 'score': 0.39}]
chr17 GH17I040282 40282707 40285650 1.43 [{'connected_gene': 'RARA', 'score': 11.19}, {'connected_gene': 'GC17P040282', 'score': 0.77}, {'connected_gene': 'PIR47746', 'score': 0.77}, {'connected_gene': 'CDC6', 'score': 0.77}, {'connected_gene': 'GC17P040270', 'score': 0.39}, {'connected_gene': 'WIPF2', 'score': 0.21}]
chr17 GH17I040281 40281051 40282506 0.74 [{'connected_gene': 'RARA', 'score': 10.93}, {'connected_gene': 'ENSG00000266208', 'score': 9.41}, {'connected_gene': 'GC17P040282', 'score': 0.77}, {'connected_gene': 'PIR47746', 'score': 0.77}, {'connected_gene': 'CDC6', 'score': 0.44}, {'connected_gene': 'GC17P040270', 'score': 0.39}, {'connected_gene': 'WIPF2', 'score': 0.21}]
chr17 GH17I040306 40306131 40328919 2.72 [{'connected_gene': 'RARA', 'score': 590.34}, {'connected_gene': 'MED1', 'score': 174.74}, {'connected_gene': 'SMARCE1', 'score': 131.66}, {'connected_gene': 'SNORD124', 'score': 126.51}, {'connected_gene': 'CDK12', 'score': 120.93}, {'connected_gene': 'MED24', 'score': 72.11}, {'connected_gene': 'MSL1', 'score': 52.0}, {'connected_gene': 'TMEM99', 'score': 23.68}, {'connected_gene': 'CDC6', 'score': 11.42}, {'connected_gene': 'WIPF2', 'score': 11.12}, {'connected_gene': 'PGAP3', 'score': 10.8}, {'connected_gene': 'TOP2A', 'score': 10.68}, {'connected_gene': 'ENSG00000264968', 'score': 10.29}, {'connected_gene': 'IGFBP4', 'score': 10.16}, {'connected_gene': 'STARD3', 'score': 9.9}, {'connected_gene': 'ENSG00000266208', 'score': 9.52}, {'connected_gene': 'IKZF3', 'score': 9.28}, {'connected_gene': 'KRTAP9-7', 'score': 5.67}, {'connected_gene': 'CCR7', 'score': 4.6}, {'connected_gene': 'RAPGEFL1', 'score': 4.15}, {'connected_gene': 'CASC3', 'score': 2.85}, {'connected_gene': 'ZPBP2', 'score': 1.4}, {'connected_gene': 'GC17P040322', 'score': 0.77}, {'connected_gene': 'GC17M040321', 'score': 0.77}, {'connected_gene': 'GC17M040319', 'score': 0.77}, {'connected_gene': 'GC17M040320', 'score': 0.77}, {'connected_gene': 'LOC105371934', 'score': 0.44}]
chr17 GH17I040337 40337601 40352700 2.71 [{'connected_gene': 'RARA', 'score': 577.48}, {'connected_gene': 'MSL1', 'score': 16.54}, {'connected_gene': 'RAPGEFL1', 'score': 11.9}, {'connected_gene': 'ENSG00000266208', 'score': 9.59}, {'connected_gene': 'RARA-AS1', 'score': 9.28}, {'connected_gene': 'WIPF2', 'score': 5.71}, {'connected_gene': 'CASC3', 'score': 1.98}, {'connected_gene': 'ENSG00000278918', 'score': 0.44}]
chr17 GH17I040329 40329649 40333579 1.33 [{'connected_gene': 'RARA', 'score': 30.74}, {'connected_gene': 'MSL1', 'score': 28.89}, {'connected_gene': 'ENSG00000266208', 'score': 9.53}, {'connected_gene': 'WIPF2', 'score': 8.47}, {'connected_gene': 'KRTAP4-6', 'score': 5.31}, {'connected_gene': 'CASC3', 'score': 2.55}, {'connected_gene': 'LOC105371934', 'score': 0.44}, {'connected_gene': 'RARA-AS1', 'score': 0.39}]
chr17 GH17I040333 40333601 40336000 1.53 [{'connected_gene': 'RARA', 'score': 26.15}, {'connected_gene': 'ENSG00000266208', 'score': 9.53}, {'connected_gene': 'MSL1', 'score': 5.98}, {'connected_gene': 'WIPF2', 'score': 5.46}, {'connected_gene': 'CASC3', 'score': 2.54}, {'connected_gene': 'RARA-AS1', 'score': 0.44}, {'connected_gene': 'LOC105371934', 'score': 0.39}]
chr17 GH17I040427 40427209 40427358 0.38 [{'connected_gene': 'RARA', 'score': 9.77}, {'connected_gene': 'RARA-AS1', 'score': 5.07}, {'connected_gene': 'GC17M040417', 'score': 0.44}, {'connected_gene': 'GC17M040441', 'score': 0.39}]
chr17 GH17I039978 39978450 39982491 2.14 [{'connected_gene': 'PSMD3', 'score': 550.77}, {'connected_gene': 'MED1', 'score': 71.91}, {'connected_gene': 'CDK12', 'score': 67.65}, {'connected_gene': 'SMARCE1', 'score': 58.43}, {'connected_gene': 'GSDMA', 'score': 50.68}, {'connected_gene': 'MSL1', 'score': 22.14}, {'connected_gene': 'MED24', 'score': 21.58}, {'connected_gene': 'SNORD124', 'score': 14.45}, {'connected_gene': 'ORMDL3', 'score': 11.69}, {'connected_gene': 'LRRC3C', 'score': 11.69}, {'connected_gene': 'GSDMB', 'score': 10.71}, {'connected_gene': 'TMEM99', 'score': 10.28}, {'connected_gene': 'RPL19', 'score': 10.22}, {'connected_gene': 'STARD3', 'score': 9.92}, {'connected_gene': 'RARA', 'score': 9.8}, {'connected_gene': 'GC17M039978', 'score': 0.44}]
chr17 GH17I040446 40446601 40449481 1.65 [{'connected_gene': 'CDK12', 'score': 17.64}, {'connected_gene': 'MED1', 'score': 14.99}, {'connected_gene': 'SMARCE1', 'score': 12.96}, {'connected_gene': 'TOP2A', 'score': 11.5}, {'connected_gene': 'CCR7', 'score': 10.59}, {'connected_gene': 'RARA', 'score': 10.27}, {'connected_gene': 'RARA-AS1', 'score': 5.56}, {'connected_gene': 'ENSG00000266208', 'score': 4.3}, {'connected_gene': 'IGFBP4', 'score': 3.27}, {'connected_gene': 'GJD3', 'score': 1.75}, {'connected_gene': 'GC17P040473', 'score': 0.34}]
chr17 GH17I040422 40422552 40423838 1.03 [{'connected_gene': 'CDK12', 'score': 19.97}, {'connected_gene': 'MED1', 'score': 15.86}, {'connected_gene': 'MSL1', 'score': 12.12}, {'connected_gene': 'GJD3', 'score': 11.78}, {'connected_gene': 'CCR7', 'score': 10.54}, {'connected_gene': 'STARD3', 'score': 10.5}, {'connected_gene': 'SMARCE1', 'score': 10.04}, {'connected_gene': 'RARA', 'score': 9.87}, {'connected_gene': 'GC17M040417', 'score': 0.44}, {'connected_gene': 'GC17M040441', 'score': 0.37}]
chr17 GH17I040442 40442305 40446199 2.5 [{'connected_gene': 'IGFBP4', 'score': 554.16}, {'connected_gene': 'MED1', 'score': 45.1}, {'connected_gene': 'SMARCE1', 'score': 33.6}, {'connected_gene': 'CDK12', 'score': 28.29}, {'connected_gene': 'SNORD124', 'score': 21.21}, {'connected_gene': 'TOP2A', 'score': 11.52}, {'connected_gene': 'CCR7', 'score': 11.16}, {'connected_gene': 'ENSG00000264968', 'score': 10.27}, {'connected_gene': 'RARA', 'score': 10.27}, {'connected_gene': 'ENSG00000266208', 'score': 7.56}, {'connected_gene': 'RARA-AS1', 'score': 7.08}, {'connected_gene': 'GJD3', 'score': 1.94}, {'connected_gene': 'GC17P040473', 'score': 0.31}]
chr17 GH17I040509 40509463 40513811 1.52 [{'connected_gene': 'IGFBP4', 'score': 11.29}, {'connected_gene': 'RPL23AP75', 'score': 11.28}, {'connected_gene': 'TOP2A', 'score': 10.53}, {'connected_gene': 'CDC6', 'score': 10.2}, {'connected_gene': 'RARA', 'score': 9.99}, {'connected_gene': 'TNS4', 'score': 6.44}, {'connected_gene': 'PNMT', 'score': 6.43}, {'connected_gene': 'LOC105371773', 'score': 0.44}]
chr17 GH17I040208 40208890 40210479 0.55 [{'connected_gene': 'MSL1', 'score': 18.59}, {'connected_gene': 'CDC6', 'score': 12.13}, {'connected_gene': 'RAPGEFL1', 'score': 11.62}, {'connected_gene': 'RARA', 'score': 10.57}, {'connected_gene': 'MED24', 'score': 10.24}, {'connected_gene': 'THRA', 'score': 10.17}, {'connected_gene': 'WIPF2', 'score': 0.44}, {'connected_gene': 'MIR6867', 'score': 0.37}, {'connected_gene': 'GC17P040124', 'score': 0.17}]
chr17 GH17I040203 40203229 40203550 0.81 [{'connected_gene': 'MSL1', 'score': 20.21}, {'connected_gene': 'CDC6', 'score': 12.3}, {'connected_gene': 'RAPGEFL1', 'score': 11.83}, {'connected_gene': 'CASC3', 'score': 11.42}, {'connected_gene': 'MED24', 'score': 10.27}, {'connected_gene': 'TOP2A', 'score': 9.72}, {'connected_gene': 'RARA', 'score': 2.52}, {'connected_gene': 'MIR6867', 'score': 0.44}, {'connected_gene': 'WIPF2', 'score': 0.37}, {'connected_gene': 'GC17P040124', 'score': 0.18}]
chr17 GH17I040190 40190509 40190738 0.68 [{'connected_gene': 'MSL1', 'score': 27.34}, {'connected_gene': 'CDC6', 'score': 11.62}, {'connected_gene': 'WIPF2', 'score': 11.53}, {'connected_gene': 'CASC3', 'score': 11.24}, {'connected_gene': 'THRA', 'score': 10.28}, {'connected_gene': 'RARA', 'score': 9.6}, {'connected_gene': 'MIR6867', 'score': 0.77}, {'connected_gene': 'RAPGEFL1', 'score': 0.39}, {'connected_gene': 'GC17P040124', 'score': 0.2}]
chr17 GH17I039939 39939248 39940837 1.32 [{'connected_gene': 'GSDMA', 'score': 29.35}, {'connected_gene': 'CDK12', 'score': 20.67}, {'connected_gene': 'MED1', 'score': 17.45}, {'connected_gene': 'SMARCE1', 'score': 17.38}, {'connected_gene': 'MSL1', 'score': 12.62}, {'connected_gene': 'RPL19', 'score': 11.71}, {'connected_gene': 'RARA', 'score': 10.96}, {'connected_gene': 'IKZF3', 'score': 2.38}, {'connected_gene': 'GC17P039944', 'score': 0.77}, {'connected_gene': 'LRRC3C', 'score': 0.39}, {'connected_gene': 'ENSG00000264968', 'score': 0.39}]
chr17 GH17I040138 40138723 40141954 2.13 [{'connected_gene': 'CASC3', 'score': 557.34}, {'connected_gene': 'GC17M040140', 'score': 550.77}, {'connected_gene': 'MED1', 'score': 134.31}, {'connected_gene': 'SNORD124', 'score': 91.71}, {'connected_gene': 'SMARCE1', 'score': 89.67}, {'connected_gene': 'CDK12', 'score': 78.87}, {'connected_gene': 'MED24', 'score': 62.65}, {'connected_gene': 'MSL1', 'score': 23.36}, {'connected_gene': 'STARD3', 'score': 20.38}, {'connected_gene': 'IGFBP4', 'score': 19.14}, {'connected_gene': 'RPL19', 'score': 18.87}, {'connected_gene': 'THRA', 'score': 15.98}, {'connected_gene': 'ENSG00000264968', 'score': 10.31}, {'connected_gene': 'KRT222', 'score': 10.28}, {'connected_gene': 'RARA', 'score': 9.85}, {'connected_gene': 'FBXL20', 'score': 9.71}, {'connected_gene': 'ENSG00000266208', 'score': 7.04}, {'connected_gene': 'GC17P040124', 'score': 0.37}, {'connected_gene': 'MIR6866', 'score': 0.34}]
chr17 GH17I040167 40167861 40169037 1.02 [{'connected_gene': 'CASC3', 'score': 13.17}, {'connected_gene': 'MSL1', 'score': 12.46}, {'connected_gene': 'MED24', 'score': 10.74}, {'connected_gene': 'RARA', 'score': 9.99}, {'connected_gene': 'ENSG00000266208', 'score': 5.34}, {'connected_gene': 'TCAP', 'score': 4.97}, {'connected_gene': 'PIR47710', 'score': 0.77}, {'connected_gene': 'MIR6866', 'score': 0.44}, {'connected_gene': 'GC17P040124', 'score': 0.26}]
chr17 GH17I040217 40217716 40220601 2.34 [{'connected_gene': 'WIPF2', 'score': 552.71}, {'connected_gene': 'MED1', 'score': 45.8}, {'connected_gene': 'CDK12', 'score': 41.29}, {'connected_gene': 'SMARCE1', 'score': 39.19}, {'connected_gene': 'RAPGEFL1', 'score': 19.61}, {'connected_gene': 'PGAP3', 'score': 13.71}, {'connected_gene': 'MSL1', 'score': 12.22}, {'connected_gene': 'STARD3', 'score': 10.5}, {'connected_gene': 'IGFBP4', 'score': 10.11}, {'connected_gene': 'ENSG00000266208', 'score': 9.33}, {'connected_gene': 'KRT222', 'score': 8.63}, {'connected_gene': 'THRA', 'score': 4.17}, {'connected_gene': 'NR1D1', 'score': 1.52}, {'connected_gene': 'RARA', 'score': 1.36}, {'connected_gene': 'MIR6867', 'score': 0.31}, {'connected_gene': 'GC17P040124', 'score': 0.16}]
chr17 GH17I040275 40275122 40276028 0.72 [{'connected_gene': 'WIPF2', 'score': 11.65}, {'connected_gene': 'RARA', 'score': 10.57}, {'connected_gene': 'TOP2A', 'score': 10.04}, {'connected_gene': 'ENSG00000266208', 'score': 9.39}, {'connected_gene': 'THRA', 'score': 9.36}, {'connected_gene': 'GC17P040282', 'score': 0.77}, {'connected_gene': 'PIR47746', 'score': 0.77}, {'connected_gene': 'GC17P040270', 'score': 0.44}]
chr17 GH17I040426 40426969 40427118 0.38 [{'connected_gene': 'GJD3', 'score': 11.76}, {'connected_gene': 'CCR7', 'score': 10.55}, {'connected_gene': 'RARA', 'score': 9.86}, {'connected_gene': 'GC17M040417', 'score': 0.44}, {'connected_gene': 'GC17M040441', 'score': 0.39}]
chr17 GH17I040330 40329029 40329120 0.63 [{'connected_gene': 'LOC105371934', 'score': 0.44}, {'connected_gene': 'RARA-AS1', 'score': 0.39}, {'connected_gene': 'RARA', 'score': 0.37}]
chr17 GH17I040193 40193300 40194314 0.82 [{'connected_gene': 'MIR6867', 'score': 550.77}, {'connected_gene': 'CDK12', 'score': 50.85}, {'connected_gene': 'MED1', 'score': 42.82}, {'connected_gene': 'SMARCE1', 'score': 37.12}, {'connected_gene': 'MSL1', 'score': 13.26}, {'connected_gene': 'WIPF2', 'score': 12.57}, {'connected_gene': 'CDC6', 'score': 11.36}, {'connected_gene': 'RPL19', 'score': 10.21}, {'connected_gene': 'STARD3', 'score': 9.9}, {'connected_gene': 'RARA', 'score': 9.87}, {'connected_gene': 'SNORD124', 'score': 9.77}, {'connected_gene': 'RAPGEFL1', 'score': 0.37}, {'connected_gene': 'GC17P040124', 'score': 0.2}]
chr17 GH17I040194 40194369 40194518 0.83 [{'connected_gene': 'MIR6867', 'score': 550.77}, {'connected_gene': 'CDK12', 'score': 50.85}, {'connected_gene': 'MED1', 'score': 42.82}, {'connected_gene': 'SMARCE1', 'score': 37.12}, {'connected_gene': 'MSL1', 'score': 27.09}, {'connected_gene': 'WIPF2', 'score': 12.59}, {'connected_gene': 'CDC6', 'score': 11.36}, {'connected_gene': 'RPL19', 'score': 10.21}, {'connected_gene': 'STARD3', 'score': 9.9}, {'connected_gene': 'RARA', 'score': 9.88}, {'connected_gene': 'SNORD124', 'score': 9.77}, {'connected_gene': 'ENSG00000266208', 'score': 9.32}, {'connected_gene': 'RAPGEFL1', 'score': 0.37}, {'connected_gene': 'GC17P040124', 'score': 0.2}]
chr17 GH17I040191 40191200 40192378 1.66 [{'connected_gene': 'MIR6867', 'score': 550.77}, {'connected_gene': 'MSL1', 'score': 27.14}, {'connected_gene': 'WIPF2', 'score': 12.57}, {'connected_gene': 'CDC6', 'score': 11.62}, {'connected_gene': 'CASC3', 'score': 11.24}, {'connected_gene': 'THRA', 'score': 10.43}, {'connected_gene': 'RARA', 'score': 10.23}, {'connected_gene': 'RAPGEFL1', 'score': 0.39}, {'connected_gene': 'GC17P040124', 'score': 0.2}]
chr17 GH17I040614 40614305 40618650 1.62 [{'connected_gene': 'GC17M040594', 'score': 550.77}, {'connected_gene': 'SMARCE1', 'score': 34.4}, {'connected_gene': 'RAPGEFL1', 'score': 5.4}, {'connected_gene': 'RARA', 'score': 2.59}, {'connected_gene': 'CCR7', 'score': 2.08}, {'connected_gene': 'WIPF2', 'score': 1.23}, {'connected_gene': 'ENSG00000279775', 'score': 0.37}]
chr17 GH17I040595 40595775 40600078 1.62 [{'connected_gene': 'ENSG00000279775', 'score': 550.77}, {'connected_gene': 'SMARCE1', 'score': 42.57}, {'connected_gene': 'CCR7', 'score': 18.01}, {'connected_gene': 'SNORD124', 'score': 10.43}, {'connected_gene': 'KRT222', 'score': 9.86}, {'connected_gene': 'KRT28', 'score': 9.49}, {'connected_gene': 'RARA', 'score': 4.1}, {'connected_gene': 'WIPF2', 'score': 2.15}, {'connected_gene': 'KRTAP3-2', 'score': 1.55}, {'connected_gene': 'CASC3', 'score': 1.42}, {'connected_gene': 'KRTAP2-1', 'score': 1.25}, {'connected_gene': 'KRTAP2-2', 'score': 1.21}, {'connected_gene': 'GC17M040594', 'score': 0.37}]
chr17 GH17I040354 40354615 40357328 1.13 [{'connected_gene': 'ENSG00000266208', 'score': 9.83}, {'connected_gene': 'ENSG00000278918', 'score': 0.44}, {'connected_gene': 'RARA', 'score': 0.25}]
chr17 GH17I040352 40352989 40353218 1.14 [{'connected_gene': 'ENSG00000266208', 'score': 9.57}, {'connected_gene': 'ENSG00000278918', 'score': 0.77}, {'connected_gene': 'RARA', 'score': 0.26}]
chr17 GH17I040302 40302609 40305314 1.17 [{'connected_gene': 'GC17P040303', 'score': 550.77}, {'connected_gene': 'GJD3', 'score': 11.57}, {'connected_gene': 'TOP2A', 'score': 10.51}, {'connected_gene': 'ENSG00000266208', 'score': 9.44}, {'connected_gene': 'WIPF2', 'score': 4.42}, {'connected_gene': 'RARA', 'score': 0.44}, {'connected_gene': 'CDC6', 'score': 0.37}]

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