PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000506793	[[44680443, 44680602], [44682710, 44682859], [44683139, 44683220], [44684350, 44684428], [44685251, 44685335], [44687975, 44688040], [44688526, 44688730], [44690023, 44690163], [44691302, 44691426], [44691859, 44691992], [44692733, 44692877], [44693682, 44693816], [44696428, 44696530], [44697631, 44697751], [44699424, 44699461], [44700560, 44702776]]	None
ENST00000281543	[[44680445, 44680804], [44682457, 44682569], [44682710, 44682859], [44683139, 44683220], [44684350, 44684428], [44685251, 44685335], [44687975, 44688040], [44688526, 44688730], [44690023, 44690163], [44691302, 44691426], [44691859, 44691992], [44692733, 44692877], [44693682, 44693816], [44696428, 44696530], [44697631, 44697751], [44699424, 44699461], [44700560, 44702943]]	[[44680639, 44680804], [44682457, 44682569], [44682710, 44682859], [44683139, 44683220], [44684350, 44684428], [44685251, 44685335], [44687975, 44688040], [44688526, 44688730], [44690023, 44690163], [44691302, 44691426], [44691859, 44691992], [44692733, 44692877], [44693682, 44693816], [44696428, 44696530], [44697631, 44697751], [44699424, 44699461], [44700560, 44700698]]
ENST00000513775	[[44680510, 44680804], [44682710, 44682859], [44683139, 44683220], [44684350, 44684428], [44685251, 44685335], [44687975, 44688040], [44688526, 44688730], [44690023, 44690163], [44691302, 44691426]]	[[44680639, 44680804], [44682710, 44682842]]
ENST00000511493	[[44696425, 44696530], [44699424, 44699461], [44700560, 44702696]]	None
NM_001345869	[[44680411, 44680804], [44682710, 44682859], [44683139, 44683220], [44684350, 44684428], [44685251, 44685335], [44687975, 44688040], [44688526, 44688730], [44690023, 44690163], [44691302, 44691426], [44691859, 44691992], [44692733, 44692877], [44693682, 44693816], [44696428, 44696530], [44697631, 44697751], [44699424, 44699461], [44700560, 44702697]]	[[44690057, 44690163], [44691302, 44691426], [44691859, 44691992], [44692733, 44692877], [44693682, 44693816], [44696428, 44696530], [44697631, 44697751], [44699424, 44699461], [44700560, 44700698]]
NM_001345867	[[44680411, 44680804], [44682457, 44682569], [44682710, 44682859], [44683139, 44683220], [44684350, 44684428], [44685255, 44685335], [44687975, 44688040], [44688526, 44688730], [44690023, 44690163], [44691302, 44691426], [44691859, 44691992], [44692733, 44692877], [44693682, 44693816], [44696428, 44696530], [44697631, 44697751], [44699424, 44699461], [44700560, 44702697]]	[[44690057, 44690163], [44691302, 44691426], [44691859, 44691992], [44692733, 44692877], [44693682, 44693816], [44696428, 44696530], [44697631, 44697751], [44699424, 44699461], [44700560, 44700698]]
NM_001345868	[[44680411, 44680804], [44682457, 44682569], [44682710, 44682859], [44683139, 44683220], [44684350, 44684428], [44685251, 44685335], [44687975, 44688040], [44688526, 44688730], [44690023, 44690163], [44691302, 44691426], [44691859, 44691992], [44692733, 44692877], [44693682, 44693816], [44696428, 44696530], [44699424, 44699461], [44700560, 44702697]]	[[44680639, 44680804], [44682457, 44682569], [44682710, 44682859], [44683139, 44683220], [44684350, 44684428], [44685251, 44685335], [44687975, 44688040], [44688526, 44688730], [44690023, 44690163], [44691302, 44691426], [44691859, 44691992], [44692733, 44692877], [44693682, 44693816], [44696428, 44696530], [44699424, 44699461], [44700560, 44700698]]
NM_021927	[[44680432, 44680804], [44682457, 44682569], [44682710, 44682859], [44683139, 44683220], [44684350, 44684428], [44685251, 44685335], [44687975, 44688040], [44688526, 44688730], [44690023, 44690163], [44691302, 44691426], [44691859, 44691992], [44692733, 44692877], [44693682, 44693816], [44696428, 44696530], [44697631, 44697751], [44699424, 44699461], [44700560, 44702697]]	[[44680639, 44680804], [44682457, 44682569], [44682710, 44682859], [44683139, 44683220], [44684350, 44684428], [44685251, 44685335], [44687975, 44688040], [44688526, 44688730], [44690023, 44690163], [44691302, 44691426], [44691859, 44691992], [44692733, 44692877], [44693682, 44693816], [44696428, 44696530], [44697631, 44697751], [44699424, 44699461], [44700560, 44700698]]

Promoter

Chrom	Start	End	Description
chr4	44680429	44680498	CAGE_peak_1_at_GUF1_5end
chr4	44680500	44680518	CAGE_peak_3_at_GUF1_5end
chr4	44680661	44680713	CAGE_peak_2_at_GUF1_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr4	GH04I044677	44677544	44680513	2.02	[{'connected_gene': 'GUF1', 'score': 571.9}, {'connected_gene': 'YIPF7', 'score': 550.77}, {'connected_gene': 'ENSG00000273369', 'score': 15.17}, {'connected_gene': 'GNPDA2', 'score': 12.9}, {'connected_gene': 'GC04M044690', 'score': 0.39}]
chr4	GH04I044863	44863117	44864761	0.43	[{'connected_gene': 'GUF1', 'score': 9.55}, {'connected_gene': 'GNPDA2', 'score': 5.29}, {'connected_gene': 'LOC100419045', 'score': 0.34}, {'connected_gene': 'LOC105374441', 'score': 0.21}]
chr4	GH04I044916	44916402	44916999	0.2	[{'connected_gene': 'GUF1', 'score': 5.6}, {'connected_gene': 'LOC105374441', 'score': 0.44}, {'connected_gene': 'GC04M044891', 'score': 0.25}, {'connected_gene': 'LOC100419045', 'score': 0.18}]
chr4	GH04I044522	44522236	44524601	0.2	[{'connected_gene': 'KCTD8', 'score': 15.76}, {'connected_gene': 'GNPDA2', 'score': 13.18}, {'connected_gene': 'GUF1', 'score': 7.89}, {'connected_gene': 'ENSG00000251159', 'score': 0.39}]
chr4	GH04I044651	44651615	44651674	0.5	[{'connected_gene': 'YIPF7', 'score': 561.85}, {'connected_gene': 'GUF1', 'score': 11.85}, {'connected_gene': 'GC04M044655', 'score': 0.37}, {'connected_gene': 'ENSG00000251159', 'score': 0.13}]
chr4	GH04I044680	44680801	44681000	0.31	[{'connected_gene': 'YIPF7', 'score': 0.77}, {'connected_gene': 'GUF1', 'score': 0.77}, {'connected_gene': 'GC04M044690', 'score': 0.39}]
chr4	GH04I044764	44764822	44766001	0.2	[{'connected_gene': 'GNPDA2', 'score': 40.01}, {'connected_gene': 'GUF1', 'score': 12.05}, {'connected_gene': 'KCTD8', 'score': 8.82}, {'connected_gene': 'LOC105374439', 'score': 0.28}, {'connected_gene': 'LOC105374440', 'score': 0.28}]
chr4	GH04I044725	44725040	44727257	2.19	[{'connected_gene': 'GNPDA2', 'score': 552.51}, {'connected_gene': 'LOC105374439', 'score': 550.77}, {'connected_gene': 'GUF1', 'score': 28.82}, {'connected_gene': 'KCTD8', 'score': 2.7}, {'connected_gene': 'ENSG00000272936', 'score': 0.34}]