PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000553356	[[96722546, 96722637], [96728988, 96729107], [96730009, 96730735], [96730933, 96730985], [96734766, 96735304]]	[[96730019, 96730735], [96730933, 96730985], [96734766, 96734853]]
ENST00000216629	[[96722160, 96722637], [96728988, 96729107], [96730009, 96731100]]	[[96730019, 96731081]]
ENST00000557122	[[96731162, 96731692], [96734766, 96734792]]	None
NM_000710	[[96722546, 96722637], [96728988, 96729107], [96730009, 96731100]]	[[96730019, 96731081]]

Promoter

Chrom	Start	End	Description
chr14	96722152	96722166	CAGE_peak_4_at_BDKRB1_5end
chr14	96722171	96722185	CAGE_peak_3_at_BDKRB1_5end
chr14	96722201	96722212	CAGE_peak_5_at_BDKRB1_5end
chr14	96722315	96722352	CAGE_peak_2_at_BDKRB1_5end
chr14	96722539	96722555	CAGE_peak_1_at_BDKRB1_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr14	GH14I095339	95339298	95341709	0.8	[{'connected_gene': 'CLMN', 'score': 17.75}, {'connected_gene': 'SNHG10', 'score': 12.13}, {'connected_gene': 'BDKRB1', 'score': 10.09}, {'connected_gene': 'SCARNA13', 'score': 9.93}, {'connected_gene': 'LINC02292', 'score': 0.39}, {'connected_gene': 'LOC105370638', 'score': 0.34}]
chr14	GH14I096260	96260212	96263945	0.98	[{'connected_gene': 'BDKRB2', 'score': 13.66}, {'connected_gene': 'ATG2B', 'score': 9.97}, {'connected_gene': 'PAPOLA', 'score': 9.28}, {'connected_gene': 'ENSG00000258793', 'score': 7.51}, {'connected_gene': 'GC14M096266', 'score': 0.77}, {'connected_gene': 'BDKRB1', 'score': 0.44}, {'connected_gene': 'ENSG00000258691', 'score': 0.22}]
chr14	GH14I096141	96140929	96141229	0.42	[{'connected_gene': 'BDKRB1', 'score': 1.93}, {'connected_gene': 'BDKRB2', 'score': 0.21}, {'connected_gene': 'C14orf132', 'score': 0.15}]
chr14	GH14I096251	96251670	96257871	1.86	[{'connected_gene': 'BDKRB1', 'score': 555.69}, {'connected_gene': 'PIR41586', 'score': 550.77}, {'connected_gene': 'ENSG00000258793', 'score': 6.02}, {'connected_gene': 'CKS1BP1', 'score': 5.77}, {'connected_gene': 'BDKRB2', 'score': 5.52}, {'connected_gene': 'ENSG00000259036', 'score': 0.34}, {'connected_gene': 'ENSG00000258691', 'score': 0.25}]
chr14	GH14I095494	95494158	95498113	1.51	[{'connected_gene': 'ATG2B', 'score': 14.62}, {'connected_gene': 'SNHG10', 'score': 11.96}, {'connected_gene': 'BDKRB1', 'score': 9.81}, {'connected_gene': 'SYNE3', 'score': 5.86}, {'connected_gene': 'CLMN', 'score': 1.82}, {'connected_gene': 'LOC101929107', 'score': 0.37}, {'connected_gene': 'LOC105370641', 'score': 0.29}]
chr14	GH14I095290	95290478	95292849	1.55	[{'connected_gene': 'SNHG10', 'score': 92.62}, {'connected_gene': 'SCARNA13', 'score': 41.41}, {'connected_gene': 'DICER1', 'score': 20.35}, {'connected_gene': 'CLMN', 'score': 16.73}, {'connected_gene': 'BDKRB1', 'score': 11.04}, {'connected_gene': 'ENSG00000258615', 'score': 0.16}]
chr14	GH14I096100	96100600	96107873	1.57	[{'connected_gene': 'PAPOLA', 'score': 16.08}, {'connected_gene': 'BDKRB2', 'score': 14.07}, {'connected_gene': 'SCARNA13', 'score': 12.73}, {'connected_gene': 'DICER1', 'score': 11.55}, {'connected_gene': 'SNHG10', 'score': 10.74}, {'connected_gene': 'C14orf132', 'score': 5.16}, {'connected_gene': 'BDKRB1', 'score': 2.44}]
chr14	GH14I096264	96264888	96270166	1.14	[{'connected_gene': 'ENSG00000258793', 'score': 562.13}, {'connected_gene': 'GC14M096266', 'score': 550.77}, {'connected_gene': 'BDKRB2', 'score': 9.17}, {'connected_gene': 'PAPOLA', 'score': 9.06}, {'connected_gene': 'GSKIP', 'score': 8.23}, {'connected_gene': 'BDKRB1', 'score': 5.22}, {'connected_gene': 'GC14M096269', 'score': 0.77}]