PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000337975	[[86302553, 86304242], [86311247, 86313051], [86337996, 86338261]]	[[86311271, 86313041]]
ENST00000536947	[[86302576, 86302720], [86302796, 86304242], [86311247, 86313051], [86337996, 86338100]]	[[86311271, 86313041]]
ENST00000559131	[[86303847, 86304242], [86337996, 86338149]]	None
NM_022480	[[86302556, 86304242], [86311247, 86313051], [86337996, 86338189]]	[[86311271, 86313041]]

Promoter

Chrom	Start	End	Description
chr15	86338110	86338132	CAGE_peak_2_at_KLHL25_5end
chr15	86338134	86338163	CAGE_peak_1_at_KLHL25_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr15	GH15I085762	85762952	85763397	0.51	[{'connected_gene': 'KLHL25', 'score': 11.39}, {'connected_gene': 'ENSG00000259407', 'score': 6.57}, {'connected_gene': 'LOC101929679', 'score': 0.77}, {'connected_gene': 'MIR1276', 'score': 0.44}, {'connected_gene': 'GC15M085845', 'score': 0.23}]
chr15	GH15I085761	85761445	85762939	0.58	[{'connected_gene': 'KLHL25', 'score': 11.39}, {'connected_gene': 'ENSG00000259407', 'score': 6.23}, {'connected_gene': 'LOC101929679', 'score': 0.77}, {'connected_gene': 'MIR1276', 'score': 0.44}, {'connected_gene': 'GC15M085845', 'score': 0.23}]
chr15	GH15I085794	85793478	85796246	1.92	[{'connected_gene': 'KLHL25', 'score': 550.77}, {'connected_gene': 'LOC101929679', 'score': 12.09}, {'connected_gene': 'ENSG00000259276', 'score': 10.1}, {'connected_gene': 'ENSG00000259762', 'score': 6.62}, {'connected_gene': 'ENSG00000259407', 'score': 5.17}, {'connected_gene': 'GC15M085845', 'score': 0.34}, {'connected_gene': 'ENSG00000259195', 'score': 0.34}]
chr15	GH15I085763	85763710	85764711	0.51	[{'connected_gene': 'KLHL25', 'score': 11.75}, {'connected_gene': 'ENSG00000259407', 'score': 5.85}, {'connected_gene': 'MIR1276', 'score': 0.44}, {'connected_gene': 'LOC101929679', 'score': 0.44}, {'connected_gene': 'GC15M085845', 'score': 0.23}]
chr15	GH15I085831	85831610	85831759	0.62	[{'connected_gene': 'KLHL25', 'score': 11.48}, {'connected_gene': 'MIR1276', 'score': 10.79}, {'connected_gene': 'MIR548AP', 'score': 0.44}, {'connected_gene': 'LOC105370952', 'score': 0.44}]
chr15	GH15I085780	85780464	85780523	0.81	[{'connected_gene': 'KLHL25', 'score': 550.39}, {'connected_gene': 'ENSG00000259195', 'score': 0.44}, {'connected_gene': 'GC15M085845', 'score': 0.28}]
chr15	GH15I085793	85793331	85793459	0.31	[{'connected_gene': 'KLHL25', 'score': 550.77}, {'connected_gene': 'ENSG00000259407', 'score': 5.18}, {'connected_gene': 'GC15M085845', 'score': 0.34}, {'connected_gene': 'ENSG00000259195', 'score': 0.34}]
chr15	GH15I085800	85800590	85800801	1.04	[{'connected_gene': 'KLHL25', 'score': 0.44}, {'connected_gene': 'GC15M085845', 'score': 0.37}]
chr15	GH15I086062	86062389	86062704	0.42	[{'connected_gene': 'AGBL1', 'score': 17.92}, {'connected_gene': 'KLHL25', 'score': 1.41}, {'connected_gene': 'ENSG00000259608', 'score': 0.15}]
chr15	GH15I085477	85477083	85478200	0.96	[{'connected_gene': 'RNU6-1280P', 'score': 10.14}, {'connected_gene': 'FABP5P9', 'score': 8.6}, {'connected_gene': 'KLHL25', 'score': 2.27}, {'connected_gene': 'GC15P085515', 'score': 0.28}, {'connected_gene': 'GC15M085416', 'score': 0.21}, {'connected_gene': 'AKAP13', 'score': 0.15}]
chr15	GH15I085788	85788870	85789873	0.67	[{'connected_gene': 'RNU6-231P', 'score': 11.08}, {'connected_gene': 'ENSG00000259276', 'score': 10.4}, {'connected_gene': 'LOC101929679', 'score': 7.15}, {'connected_gene': 'ENSG00000259407', 'score': 5.19}, {'connected_gene': 'KLHL25', 'score': 0.44}, {'connected_gene': 'ENSG00000259195', 'score': 0.37}, {'connected_gene': 'GC15M085845', 'score': 0.31}]
chr15	GH15I085836	85836416	85841000	1.2	[{'connected_gene': 'LOC105370952', 'score': 550.77}, {'connected_gene': 'KLHL25', 'score': 23.75}, {'connected_gene': 'MIR1276', 'score': 11.22}, {'connected_gene': 'ENSG00000259608', 'score': 0.13}]
chr15	GH15I085754	85754145	85759661	0.49	[{'connected_gene': 'LOC101929679', 'score': 561.47}, {'connected_gene': 'ENSG00000259276', 'score': 35.05}, {'connected_gene': 'KLHL25', 'score': 11.91}, {'connected_gene': 'ENSG00000259762', 'score': 10.24}, {'connected_gene': 'ENSG00000259407', 'score': 8.97}, {'connected_gene': 'GC15M085845', 'score': 0.22}]
chr15	GH15I085777	85777015	85779181	0.59	[{'connected_gene': 'LOC101929679', 'score': 11.16}, {'connected_gene': 'ENSG00000259276', 'score': 9.97}, {'connected_gene': 'ENSG00000259407', 'score': 7.44}, {'connected_gene': 'ENSG00000259195', 'score': 0.44}, {'connected_gene': 'KLHL25', 'score': 0.37}, {'connected_gene': 'GC15M085845', 'score': 0.28}]
chr15	GH15I085824	85824893	85825656	0.49	[{'connected_gene': 'MIR548AP', 'score': 550.77}, {'connected_gene': 'KLHL25', 'score': 17.84}, {'connected_gene': 'ENSG00000259407', 'score': 8.1}, {'connected_gene': 'RNU6-231P', 'score': 0.77}]
chr15	GH15I085825	85825830	85825859	0.69	[{'connected_gene': 'MIR548AP', 'score': 550.77}, {'connected_gene': 'KLHL25', 'score': 11.53}, {'connected_gene': 'LOC105370952', 'score': 0.39}]
chr15	GH15I085768	85768560	85770750	0.62	[{'connected_gene': 'MIR1276', 'score': 550.77}, {'connected_gene': 'ENSG00000259195', 'score': 550.77}, {'connected_gene': 'ENSG00000259276', 'score': 32.21}, {'connected_gene': 'KLHL25', 'score': 11.77}, {'connected_gene': 'LOC101929679', 'score': 7.24}, {'connected_gene': 'ENSG00000259407', 'score': 6.07}, {'connected_gene': 'GC15M085845', 'score': 0.25}]
chr15	GH15I085770	85770777	85771130	0.79	[{'connected_gene': 'MIR1276', 'score': 550.77}, {'connected_gene': 'ENSG00000259195', 'score': 550.77}, {'connected_gene': 'KLHL25', 'score': 0.34}, {'connected_gene': 'GC15M085845', 'score': 0.25}]
chr15	GH15I085771	85771410	85773439	1.24	[{'connected_gene': 'MIR1276', 'score': 550.77}, {'connected_gene': 'ENSG00000259195', 'score': 550.77}, {'connected_gene': 'ENSG00000259276', 'score': 35.03}, {'connected_gene': 'LOC101929679', 'score': 14.5}, {'connected_gene': 'ENSG00000259407', 'score': 6.49}, {'connected_gene': 'KLHL25', 'score': 2.61}, {'connected_gene': 'GC15M085845', 'score': 0.26}]
chr15	GH15I085674	85674168	85676142	0.31	[{'connected_gene': 'ENSG00000259276', 'score': 41.79}, {'connected_gene': 'ENSG00000259762', 'score': 6.61}, {'connected_gene': 'ENSG00000259407', 'score': 5.29}, {'connected_gene': 'KLHL25', 'score': 4.38}, {'connected_gene': 'ENSG00000259367', 'score': 0.77}, {'connected_gene': 'ENSG00000259453', 'score': 0.31}, {'connected_gene': 'AKAP13', 'score': 0.06}]
chr15	GH15I085765	85765866	85767111	0.54	[{'connected_gene': 'ENSG00000259276', 'score': 32.6}, {'connected_gene': 'KLHL25', 'score': 11.77}, {'connected_gene': 'ENSG00000259762', 'score': 8.17}, {'connected_gene': 'MIR1276', 'score': 0.77}, {'connected_gene': 'LOC101929679', 'score': 0.44}, {'connected_gene': 'GC15M085845', 'score': 0.25}]
chr15	GH15I085666	85666476	85670137	1.5	[{'connected_gene': 'ENSG00000259276', 'score': 41.81}, {'connected_gene': 'ENSG00000259407', 'score': 8.81}, {'connected_gene': 'AKAP13', 'score': 8.26}, {'connected_gene': 'ENSG00000259762', 'score': 7.22}, {'connected_gene': 'KLHL25', 'score': 2.26}, {'connected_gene': 'ENSG00000259367', 'score': 0.77}, {'connected_gene': 'RNU6-1280P', 'score': 0.37}, {'connected_gene': 'GC15M085652', 'score': 0.37}]
chr15	GH15I085688	85688269	85695075	1.51	[{'connected_gene': 'ENSG00000259276', 'score': 41.75}, {'connected_gene': 'RNU6-1280P', 'score': 12.13}, {'connected_gene': 'ENSG00000259407', 'score': 7.22}, {'connected_gene': 'ENSG00000259762', 'score': 6.07}, {'connected_gene': 'AKAP13', 'score': 5.24}, {'connected_gene': 'KLHL25', 'score': 4.48}, {'connected_gene': 'ENSG00000259453', 'score': 0.44}, {'connected_gene': 'ENSG00000259367', 'score': 0.34}]
chr15	GH15I085533	85533202	85536600	0.99	[{'connected_gene': 'ENSG00000259276', 'score': 22.26}, {'connected_gene': 'RNU6-1280P', 'score': 10.69}, {'connected_gene': 'AKAP13', 'score': 8.17}, {'connected_gene': 'FABP5P9', 'score': 5.8}, {'connected_gene': 'ENSG00000259762', 'score': 5.35}, {'connected_gene': 'ENSG00000259407', 'score': 5.0}, {'connected_gene': 'KLHL25', 'score': 4.76}, {'connected_gene': 'PIR37091', 'score': 0.39}, {'connected_gene': 'GC15M085525', 'score': 0.39}, {'connected_gene': 'ENSG00000259375', 'score': 0.25}]
chr15	GH15I085701	85701102	85709773	1.68	[{'connected_gene': 'ENSG00000259276', 'score': 34.62}, {'connected_gene': 'RNU6-1280P', 'score': 11.93}, {'connected_gene': 'RNU6-231P', 'score': 10.45}, {'connected_gene': 'ENSG00000259407', 'score': 7.91}, {'connected_gene': 'AKAP13', 'score': 7.84}, {'connected_gene': 'ENSG00000259762', 'score': 6.36}, {'connected_gene': 'KLHL25', 'score': 5.43}, {'connected_gene': 'ENSG00000259453', 'score': 0.77}, {'connected_gene': 'ENSG00000259544', 'score': 0.34}]
chr15	GH15I085785	85785202	85787061	1.12	[{'connected_gene': 'ENSG00000259276', 'score': 18.82}, {'connected_gene': 'LOC101929679', 'score': 11.43}, {'connected_gene': 'RNU6-231P', 'score': 11.36}, {'connected_gene': 'ENSG00000259407', 'score': 5.9}, {'connected_gene': 'AKAP13', 'score': 4.22}, {'connected_gene': 'KLHL25', 'score': 0.44}, {'connected_gene': 'ENSG00000259195', 'score': 0.37}, {'connected_gene': 'GC15M085845', 'score': 0.31}]
chr15	GH15I085709	85709804	85714817	0.79	[{'connected_gene': 'ENSG00000259276', 'score': 32.9}, {'connected_gene': 'MIR1276', 'score': 11.06}, {'connected_gene': 'RNU6-1280P', 'score': 10.89}, {'connected_gene': 'ENSG00000259762', 'score': 7.17}, {'connected_gene': 'ENSG00000259407', 'score': 6.58}, {'connected_gene': 'KLHL25', 'score': 4.42}, {'connected_gene': 'AKAP13', 'score': 3.98}, {'connected_gene': 'ENSG00000259544', 'score': 0.39}, {'connected_gene': 'ENSG00000259453', 'score': 0.39}]