PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000369405	[[114190057, 114190665], [114191997, 114192044], [114192133, 114192279], [114192997, 114193039], [114194054, 114194222], [114198093, 114198147], [114200291, 114200453], [114201949, 114202109], [114203272, 114203364], [114204927, 114205408], [114206462, 114206672]]	[[114190561, 114190665], [114191997, 114192044], [114192133, 114192279], [114192997, 114193039], [114194054, 114194222], [114198093, 114198147], [114200291, 114200453], [114201949, 114202109], [114203272, 114203364], [114204927, 114205194]]
ENST00000369404	[[114190481, 114190665], [114191997, 114192044], [114192133, 114192279], [114192997, 114193039], [114194054, 114194222], [114198093, 114198147], [114200291, 114200453], [114201949, 114202109], [114203272, 114203352], [114204927, 114205408], [114206462, 114206659]]	[[114190561, 114190665], [114191997, 114192044], [114192133, 114192279], [114192997, 114193039], [114194054, 114194222], [114198093, 114198147], [114200291, 114200453], [114201949, 114202109], [114203272, 114203352], [114204927, 114205194]]
ENST00000482410	[[114190566, 114190665], [114191997, 114192044], [114192133, 114192279], [114192997, 114193243]]	None
ENST00000471035	[[114190581, 114190665], [114191997, 114192044], [114192133, 114192279], [114192997, 114193039], [114193298, 114193328]]	None
NM_022494	[[114190047, 114190665], [114191997, 114192044], [114192133, 114192279], [114192997, 114193039], [114194054, 114194222], [114198093, 114198147], [114200291, 114200453], [114201949, 114202109], [114203272, 114203364], [114204927, 114205408], [114206462, 114206717]]	[[114190561, 114190665], [114191997, 114192044], [114192133, 114192279], [114192997, 114193039], [114194054, 114194222], [114198093, 114198147], [114200291, 114200453], [114201949, 114202109], [114203272, 114203364], [114204927, 114205194]]
NM_001303134	[[114190047, 114190665], [114191997, 114192044], [114192133, 114192279], [114192997, 114193039], [114194054, 114194222], [114198093, 114198147], [114200291, 114200453], [114201949, 114202109], [114203272, 114203352], [114204927, 114205408], [114206462, 114206717]]	[[114190561, 114190665], [114191997, 114192044], [114192133, 114192279], [114192997, 114193039], [114194054, 114194222], [114198093, 114198147], [114200291, 114200453], [114201949, 114202109], [114203272, 114203352], [114204927, 114205194]]

Promoter

Chrom	Start	End	Description
chr10	114206494	114206520	CAGE_peak_3_at_ZDHHC6_5end
chr10	114206626	114206637	CAGE_peak_4_at_ZDHHC6_5end
chr10	114206649	114206688	CAGE_peak_1_at_ZDHHC6_5end
chr10	114206689	114206719	CAGE_peak_2_at_ZDHHC6_5end
chr10	114207322	114207346	CAGE_peak_5_at_ZDHHC6_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr10	GH10I113055	113055246	113064488	1.7	[{'connected_gene': 'TCF7L2', 'score': 25.38}, {'connected_gene': 'ZDHHC6', 'score': 13.3}, {'connected_gene': 'VTI1A', 'score': 13.06}, {'connected_gene': 'LOC105378488', 'score': 10.55}, {'connected_gene': 'HABP2', 'score': 2.71}, {'connected_gene': 'RPS15AP30', 'score': 0.19}, {'connected_gene': 'LOC105378489', 'score': 0.1}]
chr10	GH10I112810	112810533	112813577	1.15	[{'connected_gene': 'TCF7L2', 'score': 10.38}, {'connected_gene': 'LOC105378488', 'score': 10.37}, {'connected_gene': 'ZDHHC6', 'score': 4.23}, {'connected_gene': 'LOC105378487', 'score': 0.77}, {'connected_gene': 'PIR40432', 'score': 0.44}, {'connected_gene': 'VTI1A', 'score': 0.05}]
chr10	GH10I113076	113076337	113077869	0.83	[{'connected_gene': 'ZDHHC6', 'score': 39.34}, {'connected_gene': 'ENSG00000225292', 'score': 19.32}, {'connected_gene': 'VTI1A', 'score': 11.61}, {'connected_gene': 'TCF7L2', 'score': 11.16}, {'connected_gene': 'RPS15AP30', 'score': 0.17}, {'connected_gene': 'LOC105378489', 'score': 0.11}]
chr10	GH10I112445	112445787	112448298	2.27	[{'connected_gene': 'ZDHHC6', 'score': 583.62}, {'connected_gene': 'VTI1A', 'score': 563.15}, {'connected_gene': 'ACSL5', 'score': 18.13}, {'connected_gene': 'LOC105378488', 'score': 10.72}, {'connected_gene': 'TCF7L2', 'score': 9.86}, {'connected_gene': 'GC10M112255', 'score': 0.1}]
chr10	GH10I112474	112474002	112477789	0.57	[{'connected_gene': 'ZDHHC6', 'score': 0.31}, {'connected_gene': 'VTI1A', 'score': 0.31}, {'connected_gene': 'GC10P112522', 'score': 0.25}, {'connected_gene': 'GC10M112255', 'score': 0.13}]
chr10	GH10I112455	112455280	112456306	0.43	[{'connected_gene': 'ZDHHC6', 'score': 0.44}, {'connected_gene': 'VTI1A', 'score': 0.44}, {'connected_gene': 'GC10P112522', 'score': 0.2}, {'connected_gene': 'GC10M112255', 'score': 0.11}]
chr10	GH10I112472	112472201	112472400	0.8	[{'connected_gene': 'ZDHHC6', 'score': 0.31}, {'connected_gene': 'VTI1A', 'score': 0.31}, {'connected_gene': 'GC10P112522', 'score': 0.23}, {'connected_gene': 'GC10M112255', 'score': 0.12}]
chr10	GH10I112471	112471962	112472131	0.83	[{'connected_gene': 'ZDHHC6', 'score': 0.34}, {'connected_gene': 'VTI1A', 'score': 0.31}, {'connected_gene': 'GC10P112522', 'score': 0.23}, {'connected_gene': 'GC10M112255', 'score': 0.12}]
chr10	GH10I112438	112438463	112438612	0.4	[{'connected_gene': 'ZDHHC6', 'score': 0.44}, {'connected_gene': 'VTI1A', 'score': 0.44}, {'connected_gene': 'ENSG00000232934', 'score': 0.39}, {'connected_gene': 'GC10M112255', 'score': 0.1}]
chr10	GH10I112482	112482562	112485504	0.38	[{'connected_gene': 'ZDHHC6', 'score': 0.28}, {'connected_gene': 'GC10P112522', 'score': 0.28}, {'connected_gene': 'VTI1A', 'score': 0.28}, {'connected_gene': 'GC10M112255', 'score': 0.13}]
chr10	GH10I113108	113108238	113109031	0.83	[{'connected_gene': 'ZDHHC6', 'score': 9.95}, {'connected_gene': 'LOC105378489', 'score': 0.13}, {'connected_gene': 'RPS15AP30', 'score': 0.13}, {'connected_gene': 'TCF7L2', 'score': 0.1}]
chr10	GH10I112330	112330269	112337359	1.24	[{'connected_gene': 'ACSL5', 'score': 22.95}, {'connected_gene': 'TECTB', 'score': 10.8}, {'connected_gene': 'ZDHHC6', 'score': 5.02}, {'connected_gene': 'PIR60176', 'score': 0.37}, {'connected_gene': 'GUCY2GP', 'score': 0.34}, {'connected_gene': 'MIR6715B', 'score': 0.29}, {'connected_gene': 'GC10M112255', 'score': 0.06}]
chr10	GH10I112359	112359715	112367251	1.27	[{'connected_gene': 'ACSL5', 'score': 24.88}, {'connected_gene': 'ZDHHC6', 'score': 7.09}, {'connected_gene': 'GUCY2GP', 'score': 0.44}, {'connected_gene': 'GC10M112255', 'score': 0.07}]
chr10	GH10I112460	112460362	112462157	0.89	[{'connected_gene': 'ACSL5', 'score': 10.66}, {'connected_gene': 'ZDHHC6', 'score': 0.39}, {'connected_gene': 'VTI1A', 'score': 0.39}, {'connected_gene': 'GC10P112522', 'score': 0.21}, {'connected_gene': 'GC10M112255', 'score': 0.11}]
chr10	GH10I112478	112478630	112480044	0.2	[{'connected_gene': 'ACSL5', 'score': 9.99}, {'connected_gene': 'ZDHHC6', 'score': 0.29}, {'connected_gene': 'VTI1A', 'score': 0.29}, {'connected_gene': 'GC10P112522', 'score': 0.26}, {'connected_gene': 'GC10M112255', 'score': 0.13}]
chr10	GH10I112381	112381827	112392117	2.26	[{'connected_gene': 'ACSL5', 'score': 615.16}, {'connected_gene': 'ZDHHC6', 'score': 7.05}, {'connected_gene': 'VTI1A', 'score': 3.22}, {'connected_gene': 'ENSG00000232934', 'score': 0.28}, {'connected_gene': 'GC10M112255', 'score': 0.08}]
chr10	GH10I112480	112480126	112481183	0.2	[{'connected_gene': 'ACSL5', 'score': 9.99}, {'connected_gene': 'ZDHHC6', 'score': 0.29}, {'connected_gene': 'VTI1A', 'score': 0.29}, {'connected_gene': 'GC10P112522', 'score': 0.26}, {'connected_gene': 'GC10M112255', 'score': 0.13}]
chr10	GH10I112372	112372297	112381554	2.44	[{'connected_gene': 'ACSL5', 'score': 610.36}, {'connected_gene': 'ZDHHC6', 'score': 7.96}, {'connected_gene': 'VTI1A', 'score': 2.84}, {'connected_gene': 'ENSG00000232934', 'score': 0.25}, {'connected_gene': 'GC10M112255', 'score': 0.07}]
chr10	GH10I112427	112427564	112431419	0.4	[{'connected_gene': 'ACSL5', 'score': 21.37}, {'connected_gene': 'ZDHHC6', 'score': 14.48}, {'connected_gene': 'ENSG00000232934', 'score': 0.77}, {'connected_gene': 'VTI1A', 'score': 0.37}, {'connected_gene': 'GC10M112255', 'score': 0.1}]
chr10	GH10I112407	112407411	112410264	0.51	[{'connected_gene': 'ACSL5', 'score': 22.35}, {'connected_gene': 'ZDHHC6', 'score': 15.39}, {'connected_gene': 'ENSG00000232934', 'score': 7.39}, {'connected_gene': 'GC10M112255', 'score': 0.08}]
chr10	GH10I112401	112401350	112401803	0.38	[{'connected_gene': 'ACSL5', 'score': 48.65}, {'connected_gene': 'ZDHHC6', 'score': 13.47}, {'connected_gene': 'ENSG00000232934', 'score': 0.34}, {'connected_gene': 'GC10M112255', 'score': 0.08}]
chr10	GH10I112402	112402573	112407236	0.69	[{'connected_gene': 'ACSL5', 'score': 37.41}, {'connected_gene': 'ZDHHC6', 'score': 14.61}, {'connected_gene': 'ENSG00000232934', 'score': 7.36}, {'connected_gene': 'GC10M112255', 'score': 0.08}]
chr10	GH10I112530	112530602	112537092	1.83	[{'connected_gene': 'ENSG00000233340', 'score': 10.05}, {'connected_gene': 'ZDHHC6', 'score': 1.9}, {'connected_gene': 'VTI1A', 'score': 1.54}, {'connected_gene': 'GC10P112522', 'score': 0.39}, {'connected_gene': 'ENSG00000234017', 'score': 0.37}, {'connected_gene': 'GC10M112255', 'score': 0.19}]
chr10	GH10I112519	112519162	112519391	0.8	[{'connected_gene': 'GC10P112522', 'score': 0.77}, {'connected_gene': 'ZDHHC6', 'score': 0.19}, {'connected_gene': 'VTI1A', 'score': 0.19}, {'connected_gene': 'GC10M112255', 'score': 0.17}]
chr10	GH10I112490	112490628	112490928	1.43	[{'connected_gene': 'GC10P112522', 'score': 0.29}, {'connected_gene': 'ZDHHC6', 'score': 0.26}, {'connected_gene': 'VTI1A', 'score': 0.26}, {'connected_gene': 'GC10M112255', 'score': 0.14}]
chr10	GH10I112498	112498843	112501383	0.57	[{'connected_gene': 'GC10P112522', 'score': 0.34}, {'connected_gene': 'ZDHHC6', 'score': 0.23}, {'connected_gene': 'VTI1A', 'score': 0.23}, {'connected_gene': 'GC10M112255', 'score': 0.15}]
chr10	GH10I112495	112495259	112496473	0.2	[{'connected_gene': 'GC10P112522', 'score': 0.31}, {'connected_gene': 'ZDHHC6', 'score': 0.25}, {'connected_gene': 'VTI1A', 'score': 0.25}, {'connected_gene': 'GC10M112255', 'score': 0.14}]
chr10	GH10I112507	112507463	112508651	0.4	[{'connected_gene': 'GC10P112522', 'score': 0.39}, {'connected_gene': 'ZDHHC6', 'score': 0.21}, {'connected_gene': 'VTI1A', 'score': 0.21}, {'connected_gene': 'GC10M112255', 'score': 0.15}]
chr10	GH10I112435	112435123	112435252	0.54	[{'connected_gene': 'ENSG00000232934', 'score': 0.44}, {'connected_gene': 'ZDHHC6', 'score': 0.39}, {'connected_gene': 'VTI1A', 'score': 0.39}, {'connected_gene': 'GC10M112255', 'score': 0.1}]
chr10	GH10I112517	112517542	112517711	0.82	[{'connected_gene': 'GC10P112522', 'score': 0.44}, {'connected_gene': 'ZDHHC6', 'score': 0.19}, {'connected_gene': 'VTI1A', 'score': 0.19}, {'connected_gene': 'GC10M112255', 'score': 0.17}]
chr10	GH10I112486	112486731	112487921	0.2	[{'connected_gene': 'GC10P112522', 'score': 0.28}, {'connected_gene': 'ZDHHC6', 'score': 0.26}, {'connected_gene': 'VTI1A', 'score': 0.26}, {'connected_gene': 'GC10M112255', 'score': 0.13}]
chr10	GH10I112350	112350163	112350375	0.27	[{'connected_gene': 'PIR60176', 'score': 550.77}, {'connected_gene': 'ACSL5', 'score': 12.03}, {'connected_gene': 'ZDHHC6', 'score': 7.03}, {'connected_gene': 'GUCY2GP', 'score': 0.44}, {'connected_gene': 'MIR6715B', 'score': 0.23}, {'connected_gene': 'GC10M112255', 'score': 0.07}]
chr10	GH10I112423	112423526	112425587	0.58	[{'connected_gene': 'ENSG00000232934', 'score': 550.77}, {'connected_gene': 'ACSL5', 'score': 8.21}, {'connected_gene': 'ZDHHC6', 'score': 0.34}, {'connected_gene': 'GC10M112255', 'score': 0.09}]