PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
NM_001080521	[[13030969, 13033653]]	[[13031123, 13032647]]

Promoter

Chrom	Start	End	Description
chr11	13030853	13030875	CAGE_peak_1_at_RASSF10_5end
chr11	13030878	13030889	CAGE_peak_2_at_RASSF10_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr11	GH11I013125	13125956	13127465	0.72	[{'connected_gene': 'RASSF10', 'score': 10.73}, {'connected_gene': 'ENSG00000255558', 'score': 0.44}, {'connected_gene': 'LOC105376558', 'score': 0.39}, {'connected_gene': 'GC11M013109', 'score': 0.29}]
chr11	GH11I013007	13007072	13013540	1.36	[{'connected_gene': 'RASSF10', 'score': 550.77}, {'connected_gene': 'LOC105376557', 'score': 550.77}, {'connected_gene': 'LINC00958', 'score': 21.62}, {'connected_gene': 'ENSG00000252329', 'score': 9.81}, {'connected_gene': 'GC11P013015', 'score': 0.44}]
chr11	GH11I013117	13117165	13121436	1.19	[{'connected_gene': 'RASSF10', 'score': 9.69}, {'connected_gene': 'LINC00958', 'score': 4.95}, {'connected_gene': 'LOC105376558', 'score': 0.44}, {'connected_gene': 'ENSG00000255558', 'score': 0.37}, {'connected_gene': 'GC11M013109', 'score': 0.28}]
chr11	GH11I013138	13138915	13144063	1.38	[{'connected_gene': 'RASSF10', 'score': 10.81}, {'connected_gene': 'ENSG00000255558', 'score': 0.44}, {'connected_gene': 'ENSG00000255018', 'score': 0.39}, {'connected_gene': 'GC11M013109', 'score': 0.37}]
chr11	GH11I013137	13137466	13138631	0.57	[{'connected_gene': 'RASSF10', 'score': 4.8}, {'connected_gene': 'ENSG00000255558', 'score': 0.77}, {'connected_gene': 'ENSG00000255018', 'score': 0.39}, {'connected_gene': 'GC11M013109', 'score': 0.37}]
chr11	GH11I013114	13114209	13115583	0.84	[{'connected_gene': 'LOC105376558', 'score': 550.77}, {'connected_gene': 'RASSF10', 'score': 4.88}, {'connected_gene': 'ENSG00000255558', 'score': 0.37}, {'connected_gene': 'GC11M013109', 'score': 0.26}]
chr11	GH11I013134	13134178	13136959	0.97	[{'connected_gene': 'ENSG00000255558', 'score': 550.77}, {'connected_gene': 'LINC00958', 'score': 5.72}, {'connected_gene': 'RASSF10', 'score': 4.81}, {'connected_gene': 'ENSG00000255018', 'score': 0.37}, {'connected_gene': 'GC11M013109', 'score': 0.34}]