PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000332715	[[28551850, 28552589], [28562599, 28562791]]	[[28552242, 28552589], [28562599, 28562774]]
NM_001105577	[[28552242, 28552589], [28562599, 28562774]]	[[28552242, 28552589], [28562599, 28562774]]

Promoter

Chrom	Start	End	Description
chr13	28562829	28562830	CAGE_peak_1_at_PRHOXNB_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr13	GH13I027988	27988683	27988742	0.68	[{'connected_gene': 'URAD', 'score': 550.77}, {'connected_gene': 'RN7SL272P', 'score': 550.77}]
chr13	GH13I028749	28749674	28755953	1.37	[{'connected_gene': 'SLC46A3', 'score': 23.41}, {'connected_gene': 'CYP51A1P2', 'score': 12.05}, {'connected_gene': 'RNU6-53P', 'score': 10.99}, {'connected_gene': 'URAD', 'score': 5.51}, {'connected_gene': 'MTUS2', 'score': 2.13}, {'connected_gene': 'ENSG00000277227', 'score': 0.31}]
chr13	GH13I027958	27958858	27982215	2	[{'connected_gene': 'CDX2', 'score': 557.17}, {'connected_gene': 'URAD', 'score': 22.79}, {'connected_gene': 'RPL21', 'score': 12.76}, {'connected_gene': 'PLUT', 'score': 12.55}, {'connected_gene': 'PDX1', 'score': 12.54}, {'connected_gene': 'GSX1', 'score': 10.83}, {'connected_gene': 'RN7SL272P', 'score': 10.79}, {'connected_gene': 'LNX2', 'score': 1.62}, {'connected_gene': 'FLT3', 'score': 1.36}, {'connected_gene': 'GC13M027960', 'score': 0.44}, {'connected_gene': 'LOC105370132', 'score': 0.44}]
chr13	GH13I027984	27984344	27984533	0.86	[{'connected_gene': 'PLUT', 'score': 12.39}, {'connected_gene': 'PDX1', 'score': 12.39}, {'connected_gene': 'GSX1', 'score': 10.71}, {'connected_gene': 'URAD', 'score': 0.77}, {'connected_gene': 'LOC105370132', 'score': 0.77}]
chr13	GH13I027952	27952463	27958474	1.78	[{'connected_gene': 'LINC00543', 'score': 550.77}, {'connected_gene': 'CDX2', 'score': 38.07}, {'connected_gene': 'PLUT', 'score': 12.6}, {'connected_gene': 'PDX1', 'score': 12.58}, {'connected_gene': 'GSX1', 'score': 10.74}, {'connected_gene': 'URAD', 'score': 8.01}, {'connected_gene': 'GC13M027960', 'score': 0.44}]