PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000497753	[[231114726, 231115265], [231124065, 231124185], [231125855, 231126009], [231131505, 231131730], [231132866, 231132900]]	None
ENST00000310256	[[231114794, 231115025], [231124065, 231124185], [231125855, 231126009], [231131505, 231131730], [231132866, 231133013], [231135883, 231136341]]	[[231114851, 231115025], [231124065, 231124185], [231125855, 231126009], [231131505, 231131730], [231132866, 231133009]]
ENST00000366658	[[231114839, 231115025], [231125855, 231126009], [231131505, 231131730], [231132866, 231133013], [231135883, 231136341]]	[[231114851, 231115025], [231125855, 231126009], [231131505, 231131730], [231132866, 231133009]]
ENST00000480519	[[231114856, 231115002], [231124065, 231124185], [231125855, 231126009], [231131505, 231131730], [231132866, 231133013], [231135368, 231135613]]	[[231114900, 231115002], [231124065, 231124185], [231125855, 231126009], [231131505, 231131730], [231132866, 231133009]]
ENST00000450711	[[231114861, 231115025], [231124065, 231124185], [231125855, 231126009], [231131505, 231131730], [231132866, 231133013], [231135368, 231135549]]	[[231114861, 231115025], [231124065, 231124185], [231125855, 231126009], [231131505, 231131730], [231132866, 231133009]]
ENST00000435927	[[231114891, 231115025], [231124065, 231124185], [231125855, 231126009], [231126345, 231126444], [231131505, 231131730], [231132866, 231133013]]	[[231114891, 231115025], [231124065, 231124185], [231125855, 231126009], [231126345, 231126444], [231131505, 231131730], [231132866, 231133009]]
ENST00000459891	[[231131505, 231131730], [231132866, 231133013], [231135368, 231135547], [231135883, 231136341]]	[[231131505, 231131730], [231132866, 231133009]]
NM_022786	[[231114794, 231115025], [231124065, 231124185], [231125855, 231126009], [231131505, 231131730], [231132866, 231133013], [231135883, 231136479]]	[[231114851, 231115025], [231124065, 231124185], [231125855, 231126009], [231131505, 231131730], [231132866, 231133009]]
NR_144538	[[231114794, 231115025], [231124065, 231124185], [231125855, 231126009], [231131505, 231131730], [231132866, 231133013], [231135368, 231135547], [231135883, 231136479]]	None
NM_001346992	[[231114794, 231115025], [231124065, 231124185], [231125855, 231126009], [231126345, 231126444], [231131505, 231131730], [231132866, 231133013], [231135883, 231136479]]	[[231114851, 231115025], [231124065, 231124185], [231125855, 231126009], [231126345, 231126444], [231131505, 231131730], [231132866, 231133009]]

Promoter

Chrom	Start	End	Description
chr1	231114810	231114854	CAGE_peak_1_at_ARV1_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr1	GH01I230976	230976824	230980430	2.31	[{'connected_gene': 'TTC13', 'score': 564.67}, {'connected_gene': 'ARV1', 'score': 560.28}, {'connected_gene': 'C1orf131', 'score': 12.59}, {'connected_gene': 'EXOC8', 'score': 6.17}, {'connected_gene': 'FAM89A', 'score': 5.84}, {'connected_gene': 'LOC101927604', 'score': 4.32}, {'connected_gene': 'SPRTN', 'score': 2.76}, {'connected_gene': 'GC01P230904', 'score': 0.19}]
chr1	GH01I230982	230982835	230982984	0.31	[{'connected_gene': 'TTC13', 'score': 9.37}, {'connected_gene': 'ARV1', 'score': 0.77}, {'connected_gene': 'MIR1182', 'score': 0.28}]
chr1	GH01I230985	230985012	230985579	0.89	[{'connected_gene': 'TTC13', 'score': 11.39}, {'connected_gene': 'ARV1', 'score': 0.44}, {'connected_gene': 'MIR1182', 'score': 0.29}]
chr1	GH01I231013	231013626	231014158	0.38	[{'connected_gene': 'FAM89A', 'score': 10.83}, {'connected_gene': 'ARV1', 'score': 9.8}, {'connected_gene': 'TTC13', 'score': 8.85}, {'connected_gene': 'MIR1182', 'score': 0.44}]
chr1	GH01I231015	231015988	231017742	0.38	[{'connected_gene': 'FAM89A', 'score': 11.04}, {'connected_gene': 'ARV1', 'score': 9.96}, {'connected_gene': 'TTC13', 'score': 8.04}, {'connected_gene': 'MIR1182', 'score': 0.77}]
chr1	GH01I231037	231037484	231041518	2.04	[{'connected_gene': 'FAM89A', 'score': 560.61}, {'connected_gene': 'C1orf131', 'score': 62.98}, {'connected_gene': 'COG2', 'score': 18.64}, {'connected_gene': 'ARV1', 'score': 10.98}, {'connected_gene': 'SPRTN', 'score': 10.81}, {'connected_gene': 'LOC644006', 'score': 5.6}]
chr1	GH01I230939	230939935	230940084	0.31	[{'connected_gene': 'FAM89A', 'score': 10.66}, {'connected_gene': 'LOC101927604', 'score': 10.52}, {'connected_gene': 'C1orf198', 'score': 10.5}, {'connected_gene': 'ARV1', 'score': 6.06}, {'connected_gene': 'TTC13', 'score': 0.28}, {'connected_gene': 'GC01P230904', 'score': 0.28}]
chr1	GH01I231625	231625939	231629214	2.04	[{'connected_gene': 'DISC1', 'score': 569.02}, {'connected_gene': 'C1orf131', 'score': 36.11}, {'connected_gene': 'SPRTN', 'score': 11.81}, {'connected_gene': 'ARV1', 'score': 10.8}, {'connected_gene': 'COG2', 'score': 9.77}, {'connected_gene': 'RNU5A-5P', 'score': 0.26}, {'connected_gene': 'TSNAX-DISC1', 'score': 0.15}]
chr1	GH01I230136	230136214	230137007	0.51	[{'connected_gene': 'GALNT2', 'score': 15.43}, {'connected_gene': 'ARV1', 'score': 5.21}, {'connected_gene': 'GC01P230113', 'score': 0.34}, {'connected_gene': 'GC01M230200', 'score': 0.14}]
chr1	GH01I230971	230971786	230973962	0.94	[{'connected_gene': 'C1orf131', 'score': 16.2}, {'connected_gene': 'FAM89A', 'score': 14.86}, {'connected_gene': 'ARV1', 'score': 10.23}, {'connected_gene': 'COG2', 'score': 9.86}, {'connected_gene': 'TTC13', 'score': 9.07}, {'connected_gene': 'C1orf198', 'score': 4.4}, {'connected_gene': 'GC01P230904', 'score': 0.2}]
chr1	GH01I230902	230902385	230902708	0.24	[{'connected_gene': 'LOC101927604', 'score': 11.24}, {'connected_gene': 'C1orf198', 'score': 11.18}, {'connected_gene': 'ARV1', 'score': 7.74}, {'connected_gene': 'TTC13', 'score': 3.64}, {'connected_gene': 'COG2', 'score': 2.27}, {'connected_gene': 'C1orf131', 'score': 1.62}, {'connected_gene': 'GNPAT', 'score': 1.29}, {'connected_gene': 'GC01P230904', 'score': 0.77}, {'connected_gene': 'RN7SL837P', 'score': 0.44}]