PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000371538	[[53152507, 53153840], [53158398, 53158539], [53163892, 53164038]]	[[53153391, 53153840], [53158398, 53158539], [53163892, 53163998]]
ENST00000486918	[[53153233, 53153840], [53158398, 53158539], [53163580, 53163740]]	None
NM_023077	[[53152013, 53153840], [53158398, 53158539], [53163892, 53164038]]	[[53153391, 53153840], [53158398, 53158539], [53163892, 53163998]]

Promoter

Chrom	Start	End	Description
chr1	53163992	53164041	CAGE_peak_1_at_SELRC1_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr1	GH01I052702	52702509	52704200	1.28	[{'connected_gene': 'ZYG11B', 'score': 10.11}, {'connected_gene': 'COA7', 'score': 9.93}, {'connected_gene': 'NDUFS5P3', 'score': 0.44}]
chr1	GH01I052706	52706201	52706600	0.31	[{'connected_gene': 'ZYG11B', 'score': 10.39}, {'connected_gene': 'COA7', 'score': 10.09}, {'connected_gene': 'NDUFS5P3', 'score': 0.77}]
chr1	GH01I052697	52697047	52699251	2.09	[{'connected_gene': 'COA7', 'score': 560.38}, {'connected_gene': 'GC01P052696', 'score': 550.77}, {'connected_gene': 'ZCCHC11', 'score': 28.3}, {'connected_gene': 'MAGOH', 'score': 27.35}, {'connected_gene': 'KTI12', 'score': 13.89}, {'connected_gene': 'PRPF38A', 'score': 12.98}, {'connected_gene': 'ENSG00000230953', 'score': 12.3}, {'connected_gene': 'ENSG00000272100', 'score': 12.0}, {'connected_gene': 'ENSG00000266993', 'score': 11.53}, {'connected_gene': 'ZFYVE9', 'score': 11.42}, {'connected_gene': 'ORC1', 'score': 10.83}, {'connected_gene': 'ZYG11B', 'score': 10.11}, {'connected_gene': 'ECHDC2', 'score': 9.97}]
chr1	GH01I052700	52700602	52701213	1.05	[{'connected_gene': 'COA7', 'score': 0.77}, {'connected_gene': 'NDUFS5P3', 'score': 0.44}]
chr1	GH01I052903	52903489	52903839	0.34	[{'connected_gene': 'ECHDC2', 'score': 19.69}, {'connected_gene': 'SCP2', 'score': 14.49}, {'connected_gene': 'LOC100652967', 'score': 12.34}, {'connected_gene': 'ZYG11B', 'score': 7.57}, {'connected_gene': 'COA7', 'score': 7.42}, {'connected_gene': 'PIR50883', 'score': 0.44}, {'connected_gene': 'ENSG00000230953', 'score': 0.37}]
chr1	GH01I052926	52926607	52928429	1.89	[{'connected_gene': 'ECHDC2', 'score': 567.89}, {'connected_gene': 'SCP2', 'score': 550.77}, {'connected_gene': 'MIR1273F', 'score': 550.77}, {'connected_gene': 'COA7', 'score': 7.45}, {'connected_gene': 'SLC1A7', 'score': 5.62}]
chr1	GH01I052653	52653159	52654829	0.59	[{'connected_gene': 'GPX7', 'score': 11.44}, {'connected_gene': 'PRPF38A', 'score': 9.91}, {'connected_gene': 'COA7', 'score': 5.15}, {'connected_gene': 'GC01P052637', 'score': 0.37}, {'connected_gene': 'SHISAL2A', 'score': 0.34}, {'connected_gene': 'PIR34624', 'score': 0.34}]
chr1	GH01I052674	52674316	52680020	0.91	[{'connected_gene': 'GPX7', 'score': 15.91}, {'connected_gene': 'ZCCHC11', 'score': 11.18}, {'connected_gene': 'ZYG11B', 'score': 7.65}, {'connected_gene': 'COA7', 'score': 6.45}, {'connected_gene': 'SCP2', 'score': 5.53}, {'connected_gene': 'SHISAL2A', 'score': 5.34}, {'connected_gene': 'PIR34624', 'score': 0.77}, {'connected_gene': 'GC01P052685', 'score': 0.44}]
chr1	GH01I052686	52686000	52686938	0.84	[{'connected_gene': 'GC01P052685', 'score': 550.77}, {'connected_gene': 'PRPF38A', 'score': 11.25}, {'connected_gene': 'ZYG11B', 'score': 7.0}, {'connected_gene': 'SCP2', 'score': 5.54}, {'connected_gene': 'COA7', 'score': 4.41}, {'connected_gene': 'GC01P052696', 'score': 0.44}]
chr1	GH01I052707	52706847	52709489	0.89	[{'connected_gene': 'GC01P052710', 'score': 550.77}, {'connected_gene': 'NDUFS5P3', 'score': 550.77}, {'connected_gene': 'ZYG11B', 'score': 10.4}, {'connected_gene': 'COA7', 'score': 9.25}, {'connected_gene': 'SCP2', 'score': 4.54}]