PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000370830	[[55618442, 55620480], [55623802, 55623913], [55625254, 55625331], [55638846, 55639041], [55659076, 55659225], [55684452, 55684645], [55739173, 55740362]]	[[55620330, 55620480], [55623802, 55623913], [55625254, 55625331], [55638846, 55639041], [55659076, 55659225], [55684452, 55684645], [55739173, 55739663]]
ENST00000446683	[[55619724, 55620480], [55625254, 55625331], [55638846, 55639041], [55659076, 55659225], [55684452, 55684645], [55739173, 55739677]]	[[55620330, 55620480], [55625254, 55625331], [55638846, 55639041], [55659076, 55659225], [55684452, 55684645], [55739173, 55739663]]
NM_021073	[[55618450, 55620480], [55623802, 55623913], [55625254, 55625331], [55638846, 55639041], [55659076, 55659225], [55684452, 55684645], [55739173, 55740388]]	[[55620330, 55620480], [55623802, 55623913], [55625254, 55625331], [55638846, 55639041], [55659076, 55659225], [55684452, 55684645], [55739173, 55739663]]
NM_001329754	[[55618450, 55620480], [55625254, 55625331], [55638846, 55639041], [55659076, 55659225], [55684452, 55684645], [55739173, 55740388]]	[[55620330, 55620480], [55625254, 55625331], [55638846, 55639041], [55659076, 55659225], [55684452, 55684645], [55739173, 55739663]]
NM_001329756	[[55618450, 55620480], [55638846, 55639041], [55659076, 55659225], [55684452, 55684645], [55739173, 55740388]]	[[55620460, 55620480], [55638846, 55639041], [55659076, 55659225], [55684452, 55684645], [55739173, 55739663]]

Promoter

Chrom	Start	End	Description
chr6	55740051	55740056	CAGE_peak_5_at_BMP5_5end
chr6	55740352	55740361	CAGE_peak_2_at_BMP5_5end
chr6	55740381	55740398	CAGE_peak_1_at_BMP5_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr6	GH06I055755	55755540	55759842	0.96	[{'connected_gene': 'BMP5', 'score': 4.8}, {'connected_gene': 'GC06P055778', 'score': 0.34}, {'connected_gene': 'GC06P055722', 'score': 0.28}]
chr6	GH06I055865	55865681	55867481	0.83	[{'connected_gene': 'BMP5', 'score': 0.44}, {'connected_gene': 'PIR53614', 'score': 0.44}]
chr6	GH06I055867	55867853	55870381	0.98	[{'connected_gene': 'BMP5', 'score': 0.44}, {'connected_gene': 'PIR53614', 'score': 0.39}]
chr6	GH06I055822	55822943	55823092	0.4	[{'connected_gene': 'PIR53614', 'score': 0.29}, {'connected_gene': 'GC06P055778', 'score': 0.26}, {'connected_gene': 'BMP5', 'score': 0.23}]
chr6	GH06I055842	55842052	55842410	0.42	[{'connected_gene': 'PIR53614', 'score': 0.39}, {'connected_gene': 'BMP5', 'score': 0.29}, {'connected_gene': 'GC06P055778', 'score': 0.21}]
chr6	GH06I055827	55827712	55828662	0.67	[{'connected_gene': 'PIR53614', 'score': 0.31}, {'connected_gene': 'GC06P055778', 'score': 0.25}, {'connected_gene': 'BMP5', 'score': 0.25}]
chr6	GH06I055776	55776142	55776449	0.63	[{'connected_gene': 'GC06P055778', 'score': 550.77}, {'connected_gene': 'GC06P055722', 'score': 0.23}, {'connected_gene': 'BMP5', 'score': 0.15}]
chr6	GH06I055793	55793930	55795055	0.38	[{'connected_gene': 'GC06P055778', 'score': 0.37}, {'connected_gene': 'PIR53614', 'score': 0.21}, {'connected_gene': 'BMP5', 'score': 0.18}]
chr6	GH06I055874	55874040	55876172	1.01	[{'connected_gene': 'PIR59218', 'score': 550.77}, {'connected_gene': 'BMP5', 'score': 550.77}, {'connected_gene': 'PIR53614', 'score': 0.37}]
chr6	GH06I055852	55852775	55854072	0.31	[{'connected_gene': 'PIR53614', 'score': 0.77}, {'connected_gene': 'BMP5', 'score': 0.34}, {'connected_gene': 'GC06P055778', 'score': 0.18}]
chr6	GH06I055834	55834912	55835980	0.31	[{'connected_gene': 'PIR53614', 'score': 0.34}, {'connected_gene': 'BMP5', 'score': 0.26}, {'connected_gene': 'GC06P055778', 'score': 0.22}]
chr6	GH06I055824	55824315	55827644	0.83	[{'connected_gene': 'PIR53614', 'score': 0.29}, {'connected_gene': 'GC06P055778', 'score': 0.25}, {'connected_gene': 'BMP5', 'score': 0.25}]
chr6	GH06I055820	55820957	55822380	0.43	[{'connected_gene': 'PIR53614', 'score': 0.28}, {'connected_gene': 'GC06P055778', 'score': 0.26}, {'connected_gene': 'BMP5', 'score': 0.23}]
chr6	GH06I055831	55831417	55832879	0.2	[{'connected_gene': 'PIR53614', 'score': 0.34}, {'connected_gene': 'BMP5', 'score': 0.26}, {'connected_gene': 'GC06P055778', 'score': 0.23}]
chr6	GH06I055828	55828946	55829688	0.31	[{'connected_gene': 'PIR53614', 'score': 0.31}, {'connected_gene': 'BMP5', 'score': 0.25}, {'connected_gene': 'GC06P055778', 'score': 0.23}]