Visualization of regulatory element with DNMs in transcripts



Visualization of de novo variants in transcripts


Visualization of original de novo CNV set
   There is no corresponding data published yet, we will update it when such data available.

Transcripts
Transcript ID Transcript exon region Coding exon region
ENST00000237623 [[88896818, 88896952], [88898033, 88898101], [88898210, 88898249], [88901197, 88901278], [88902626, 88902950], [88903643, 88904562]] [[88898047, 88898101], [88898210, 88898249], [88901197, 88901278], [88902626, 88902950], [88903643, 88904048]]
ENST00000395080 [[88896839, 88896952], [88898033, 88898101], [88898210, 88898249], [88901197, 88901278], [88901544, 88901586], [88902626, 88902950], [88903643, 88904449]] [[88898047, 88898101], [88898210, 88898249], [88901197, 88901278], [88901544, 88901586], [88902626, 88902950], [88903643, 88904048]]
ENST00000504310 [[88896865, 88896952], [88898033, 88898101], [88898210, 88898249], [88898813, 88899176]] None
ENST00000513981 [[88896865, 88896952], [88898033, 88898101], [88898210, 88898249], [88898813, 88899011], [88901197, 88901278], [88901544, 88901586], [88902626, 88902830]] None
ENST00000509334 [[88896865, 88896952], [88898033, 88898101], [88898210, 88898249], [88898813, 88899011], [88901197, 88901278], [88902626, 88902913]] None
ENST00000508233 [[88896865, 88896952], [88898033, 88898101], [88898210, 88898249], [88902626, 88902950], [88903643, 88903950]] [[88898047, 88898101], [88898210, 88898249], [88902626, 88902950], [88903643, 88903950]]
ENST00000360804 [[88896865, 88896952], [88898033, 88898101], [88898210, 88898249], [88901544, 88901586], [88902626, 88902950], [88903643, 88904279]] [[88898047, 88898101], [88898210, 88898249], [88901544, 88901586], [88902626, 88902950], [88903643, 88904048]]
ENST00000509659 [[88896866, 88896952], [88898033, 88898101], [88898210, 88898249], [88898813, 88899002], [88901197, 88901278], [88901544, 88901586], [88902626, 88902950], [88903643, 88904478]] None
ENST00000508002 [[88896868, 88896952], [88898033, 88898101], [88898210, 88898249], [88901197, 88901278], [88901544, 88901840]] None
ENST00000505146 [[88898031, 88898101], [88898210, 88898249], [88901197, 88901340]] None
NM_001251829 [[88896801, 88896952], [88898033, 88898101], [88898210, 88898249], [88902626, 88902950], [88903643, 88904563]] [[88898047, 88898101], [88898210, 88898249], [88902626, 88902950], [88903643, 88904048]]
NM_001040060 [[88896801, 88896952], [88898033, 88898101], [88898210, 88898249], [88901544, 88901586], [88902626, 88902950], [88903643, 88904563]] [[88898047, 88898101], [88898210, 88898249], [88901544, 88901586], [88902626, 88902950], [88903643, 88904048]]
NM_000582 [[88896801, 88896952], [88898033, 88898101], [88898210, 88898249], [88901197, 88901278], [88902626, 88902950], [88903643, 88904563]] [[88898047, 88898101], [88898210, 88898249], [88901197, 88901278], [88902626, 88902950], [88903643, 88904048]]
NM_001040058 [[88896801, 88896952], [88898033, 88898101], [88898210, 88898249], [88901197, 88901278], [88901544, 88901586], [88902626, 88902950], [88903643, 88904563]] [[88898047, 88898101], [88898210, 88898249], [88901197, 88901278], [88901544, 88901586], [88902626, 88902950], [88903643, 88904048]]
NM_001251830 [[88896801, 88896952], [88898033, 88898101], [88898210, 88898249], [88898813, 88899002], [88901197, 88901278], [88901544, 88901586], [88902626, 88902950], [88903643, 88904563]] [[88898870, 88899002], [88901197, 88901278], [88901544, 88901586], [88902626, 88902950], [88903643, 88904048]]
Promoter
Chrom Start End Description
chr4 88896857 88896874 CAGE_peak_1_at_SPP1_5end
chr4 88898025 88898048 CAGE_peak_3_at_SPP1_5end
chr4 88898050 88898078 CAGE_peak_4_at_SPP1_5end
chr4 88901191 88901205 CAGE_peak_5_at_SPP1_5end
chr4 88901208 88901247 CAGE_peak_2_at_SPP1_5end
chr4 88901534 88901556 CAGE_peak_6_at_SPP1_5end