PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000263918	[[37070782, 37076768], [37076856, 37076943], [37078142, 37078250], [37082354, 37082495], [37084998, 37085166], [37088274, 37088396], [37094956, 37095004], [37096696, 37096872], [37105033, 37105170], [37111074, 37111218], [37113858, 37113969], [37121040, 37121176], [37126665, 37126801], [37129726, 37129894], [37132682, 37132761], [37143220, 37143294], [37152247, 37152351], [37193372, 37193615]]	[[37076598, 37076768], [37076856, 37076943], [37078142, 37078250], [37082354, 37082495], [37084998, 37085166], [37088274, 37088396], [37094956, 37095004], [37096696, 37096872], [37105033, 37105170], [37111074, 37111218], [37113858, 37113969], [37121040, 37121176], [37126665, 37126801], [37129726, 37129894], [37132682, 37132761], [37143220, 37143294], [37152247, 37152351], [37193372, 37193606]]
ENST00000379213	[[37075471, 37076768], [37076856, 37076943], [37078142, 37078250], [37082354, 37082495], [37084998, 37085166], [37088274, 37088396], [37094956, 37095004], [37096696, 37096872], [37105033, 37105170], [37111074, 37111218], [37121040, 37121176], [37126665, 37126801], [37129726, 37129894], [37132682, 37132761], [37143220, 37143294], [37152247, 37152351], [37193372, 37193489], [37193525, 37193606]]	[[37076598, 37076768], [37076856, 37076943], [37078142, 37078250], [37082354, 37082495], [37084998, 37085166], [37088274, 37088396], [37094956, 37095004], [37096696, 37096872], [37105033, 37105170], [37111074, 37111218], [37121040, 37121176], [37126665, 37126801], [37129726, 37129894], [37132682, 37132761], [37143220, 37143294], [37152247, 37152351], [37193372, 37193489], [37193525, 37193606]]
ENST00000495595	[[37096845, 37096872], [37105033, 37105170], [37111074, 37111208], [37113858, 37113969], [37121040, 37121176], [37126665, 37126801], [37129726, 37130071]]	None
NM_003162	[[37064840, 37076768], [37076856, 37076943], [37078142, 37078250], [37082354, 37082495], [37084998, 37085166], [37088274, 37088396], [37094956, 37095004], [37096696, 37096872], [37105033, 37105170], [37111074, 37111218], [37113858, 37113969], [37121040, 37121176], [37126665, 37126801], [37129726, 37129894], [37132682, 37132761], [37143220, 37143294], [37152247, 37152351], [37193372, 37193615]]	[[37076598, 37076768], [37076856, 37076943], [37078142, 37078250], [37082354, 37082495], [37084998, 37085166], [37088274, 37088396], [37094956, 37095004], [37096696, 37096872], [37105033, 37105170], [37111074, 37111218], [37113858, 37113969], [37121040, 37121176], [37126665, 37126801], [37129726, 37129894], [37132682, 37132761], [37143220, 37143294], [37152247, 37152351], [37193372, 37193606]]

Promoter

Chrom	Start	End	Description
chr2	37129754	37129795	CAGE_peak_6_at_STRN_5end
chr2	37130000	37130048	CAGE_peak_2_at_STRN_5end
chr2	37130051	37130060	CAGE_peak_9_at_STRN_5end
chr2	37130064	37130078	CAGE_peak_7_at_STRN_5end
chr2	37130087	37130098	CAGE_peak_8_at_STRN_5end
chr2	37193617	37193633	CAGE_peak_4_at_STRN_5end
chr2	37193648	37193760	CAGE_peak_1_at_STRN_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr2	GH02I037000	37000024	37001619	0.31	[{'connected_gene': 'STRN', 'score': 19.5}, {'connected_gene': 'GC02M036982', 'score': 0.37}, {'connected_gene': 'HEATR5B', 'score': 0.18}]
chr2	GH02I037019	37019680	37021782	0.66	[{'connected_gene': 'STRN', 'score': 20.25}, {'connected_gene': 'GC02M036982', 'score': 0.28}, {'connected_gene': 'HEATR5B', 'score': 0.21}]
chr2	GH02I036972	36972140	36972143	0.49	[{'connected_gene': 'STRN', 'score': 0.44}, {'connected_gene': 'GC02M036982', 'score': 0.39}, {'connected_gene': 'HEATR5B', 'score': 0.14}]
chr2	GH02I036961	36961576	36968848	2.29	[{'connected_gene': 'STRN', 'score': 562.56}, {'connected_gene': 'ENSG00000272054', 'score': 12.37}, {'connected_gene': 'GPATCH11', 'score': 5.52}, {'connected_gene': 'GC02P036908', 'score': 0.22}, {'connected_gene': 'HEATR5B', 'score': 0.13}]
chr2	GH02I037012	37012601	37013998	0.91	[{'connected_gene': 'STRN', 'score': 16.37}, {'connected_gene': 'GPATCH11', 'score': 5.13}, {'connected_gene': 'GC02M036982', 'score': 0.31}, {'connected_gene': 'HEATR5B', 'score': 0.19}]
chr2	GH02I036888	36888727	36891271	0.92	[{'connected_gene': 'STRN', 'score': 6.79}, {'connected_gene': 'CEBPZOS', 'score': 6.62}, {'connected_gene': 'GC02P036908', 'score': 0.37}, {'connected_gene': 'RNU6-577P', 'score': 0.34}]
chr2	GH02I036926	36926401	36926600	0.62	[{'connected_gene': 'STRN', 'score': 10.89}, {'connected_gene': 'GC02P036908', 'score': 0.37}]
chr2	GH02I036930	36930481	36931899	0.69	[{'connected_gene': 'STRN', 'score': 21.52}, {'connected_gene': 'GC02P036908', 'score': 0.34}]
chr2	GH02I036951	36951138	36954030	0.84	[{'connected_gene': 'STRN', 'score': 8.86}, {'connected_gene': 'GC02P036908', 'score': 0.26}]
chr2	GH02I037060	37060163	37061007	0.2	[{'connected_gene': 'HEATR5B', 'score': 17.42}, {'connected_gene': 'GPATCH11', 'score': 12.61}, {'connected_gene': 'STRN', 'score': 10.48}, {'connected_gene': 'GC02M036982', 'score': 0.18}]
chr2	GH02I037089	37089677	37092335	0.96	[{'connected_gene': 'CEBPZ', 'score': 15.01}, {'connected_gene': 'NDUFAF7', 'score': 10.59}, {'connected_gene': 'CEBPZOS', 'score': 6.88}, {'connected_gene': 'GPATCH11', 'score': 6.52}, {'connected_gene': 'STRN', 'score': 5.74}, {'connected_gene': 'HEATR5B', 'score': 5.42}, {'connected_gene': 'ENSG00000224891', 'score': 0.22}]
chr2	GH02I037349	37349132	37350287	1.39	[{'connected_gene': 'CEBPZOS', 'score': 14.61}, {'connected_gene': 'PRKD3', 'score': 13.32}, {'connected_gene': 'LOC101929542', 'score': 11.94}, {'connected_gene': 'NDUFAF7', 'score': 5.13}, {'connected_gene': 'HEATR5B', 'score': 3.41}, {'connected_gene': 'STRN', 'score': 2.11}, {'connected_gene': 'QPCT', 'score': 2.07}, {'connected_gene': 'GC02P037427', 'score': 0.19}]
chr2	GH02I037004	37004870	37005611	0.73	[{'connected_gene': 'ENSG00000272054', 'score': 20.5}, {'connected_gene': 'STRN', 'score': 18.02}, {'connected_gene': 'HEATR5B', 'score': 11.06}, {'connected_gene': 'CEBPZ', 'score': 10.28}, {'connected_gene': 'GC02M036982', 'score': 0.34}]
chr2	GH02I037149	37149354	37150519	0.56	[{'connected_gene': 'ENSG00000224891', 'score': 550.77}, {'connected_gene': 'RPL31P16', 'score': 10.95}, {'connected_gene': 'CEBPZOS', 'score': 10.94}, {'connected_gene': 'SULT6B1', 'score': 10.94}, {'connected_gene': 'CEBPZ', 'score': 10.76}, {'connected_gene': 'NDUFAF7', 'score': 10.76}, {'connected_gene': 'EIF2AK2', 'score': 10.68}, {'connected_gene': 'STRN', 'score': 9.6}]