PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000319006	[[747328, 747578], [755878, 756002], [758949, 759057], [760121, 760253], [763343, 763519], [763746, 763944], [764287, 764433], [764812, 765024]]	[[747481, 747578], [755878, 756002], [758949, 759057], [760121, 760253], [763343, 763519], [763746, 763944], [764287, 764433], [764812, 764845]]
ENST00000528070	[[747414, 747578], [752263, 752473], [755878, 756002], [759008, 759057], [760121, 760253], [763343, 763520]]	[[747481, 747578], [752263, 752319]]
ENST00000532685	[[747416, 747578], [755878, 756284]]	None
ENST00000528097	[[747427, 747578], [755878, 756002], [758949, 759057], [760121, 760253], [763343, 763519], [763746, 763940], [764287, 764433], [764812, 765012]]	[[747481, 747578], [755878, 756002], [758949, 759057], [760121, 760253], [763343, 763519], [763746, 763940], [764287, 764413]]
ENST00000530440	[[747453, 747578], [755878, 756002], [759008, 759057], [760121, 760253], [763343, 763519], [763746, 763850]]	[[747481, 747578], [755878, 756002], [759008, 759057], [760121, 760133]]
ENST00000530119	[[747463, 747578], [755878, 756002], [758949, 759057], [760121, 760965]]	None
ENST00000533796	[[755743, 756002], [758949, 759057], [760121, 760257]]	None
ENST00000530666	[[763981, 764433], [764812, 764947]]	None
ENST00000532202	[[764369, 764446], [764812, 765005]]	None
NM_006755	[[747431, 747578], [755878, 756002], [758949, 759057], [760121, 760253], [763343, 763519], [763746, 763944], [764287, 764433], [764812, 765024]]	[[747481, 747578], [755878, 756002], [758949, 759057], [760121, 760253], [763343, 763519], [763746, 763944], [764287, 764433], [764812, 764845]]

Promoter

Chrom	Start	End	Description
chr11	747411	747481	CAGE_peak_1_at_TALDO1_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr11	GH11I000745	745459	750559	2.45	[{'connected_gene': 'TALDO1', 'score': 564.46}, {'connected_gene': 'ENSG00000255108', 'score': 55.59}, {'connected_gene': 'RPLP2', 'score': 22.07}, {'connected_gene': 'IRF7', 'score': 12.85}, {'connected_gene': 'LOC171391', 'score': 10.35}, {'connected_gene': 'DEAF1', 'score': 3.27}, {'connected_gene': 'TMEM80', 'score': 2.83}, {'connected_gene': 'IFITM2', 'score': 1.3}, {'connected_gene': 'GC11P000742', 'score': 0.44}, {'connected_gene': 'LOC105376509', 'score': 0.39}, {'connected_gene': 'GATD1', 'score': 0.31}]
chr11	GH11I000765	765893	767548	0.62	[{'connected_gene': 'RPLP2', 'score': 21.2}, {'connected_gene': 'LOC171391', 'score': 11.05}, {'connected_gene': 'EPS8L2', 'score': 6.1}, {'connected_gene': 'GATD1', 'score': 0.39}, {'connected_gene': 'TALDO1', 'score': 0.37}]
chr11	GH11I000741	741538	741804	0.61	[{'connected_gene': 'IRF7', 'score': 9.0}, {'connected_gene': 'LOC171391', 'score': 7.55}, {'connected_gene': 'LOC105376509', 'score': 0.77}, {'connected_gene': 'GC11P000742', 'score': 0.77}, {'connected_gene': 'GC11P000743', 'score': 0.77}, {'connected_gene': 'TALDO1', 'score': 0.44}]
chr11	GH11I000657	657246	658592	0.72	[{'connected_gene': 'TMEM80', 'score': 56.58}, {'connected_gene': 'EPS8L2', 'score': 22.27}, {'connected_gene': 'DEAF1', 'score': 12.94}, {'connected_gene': 'CDHR5', 'score': 11.95}, {'connected_gene': 'IRF7', 'score': 11.92}, {'connected_gene': 'TALDO1', 'score': 11.84}, {'connected_gene': 'CEND1', 'score': 11.3}, {'connected_gene': 'SLC25A22', 'score': 11.29}, {'connected_gene': 'PIDD1', 'score': 11.29}, {'connected_gene': 'RPLP2', 'score': 11.29}, {'connected_gene': 'LOC171391', 'score': 11.18}, {'connected_gene': 'GATD1', 'score': 11.18}, {'connected_gene': 'ENSG00000255142', 'score': 11.17}, {'connected_gene': 'PTDSS2', 'score': 5.07}, {'connected_gene': 'HRAS', 'score': 4.98}, {'connected_gene': 'GC11P000654', 'score': 0.77}, {'connected_gene': 'GC11P000663', 'score': 0.44}]
chr11	GH11I000775	775406	779262	2.15	[{'connected_gene': 'LOC171391', 'score': 550.77}, {'connected_gene': 'GATD1', 'score': 550.77}, {'connected_gene': 'ENSG00000255108', 'score': 48.87}, {'connected_gene': 'TALDO1', 'score': 6.36}, {'connected_gene': 'TMEM80', 'score': 6.28}, {'connected_gene': 'MIR210', 'score': 4.86}]
chr11	GH11I000766	765361	765570	0.94	[{'connected_gene': 'LOC171391', 'score': 11.11}, {'connected_gene': 'GATD1', 'score': 0.39}, {'connected_gene': 'TALDO1', 'score': 0.37}]
chr11	GH11I000752	752309	752823	0.43	[{'connected_gene': 'LOC171391', 'score': 10.21}, {'connected_gene': 'TMEM80', 'score': 6.25}, {'connected_gene': 'TALDO1', 'score': 0.44}, {'connected_gene': 'GATD1', 'score': 0.34}]
chr11	GH11I000303	303723	321507	2.73	[{'connected_gene': 'IFITM2', 'score': 593.63}, {'connected_gene': 'IFITM3', 'score': 582.18}, {'connected_gene': 'ENSG00000254910', 'score': 579.72}, {'connected_gene': 'IFITM1', 'score': 556.92}, {'connected_gene': 'PGGHG', 'score': 29.04}, {'connected_gene': 'TMEM80', 'score': 28.07}, {'connected_gene': 'PHRF1', 'score': 23.75}, {'connected_gene': 'ENSG00000270030', 'score': 21.6}, {'connected_gene': 'BET1L', 'score': 21.48}, {'connected_gene': 'RIC8A', 'score': 21.25}, {'connected_gene': 'SNORA52', 'score': 21.25}, {'connected_gene': 'ENSG00000251661', 'score': 19.39}, {'connected_gene': 'PIDD1', 'score': 14.45}, {'connected_gene': 'ENSG00000255026', 'score': 13.99}, {'connected_gene': 'NLRP6', 'score': 13.97}, {'connected_gene': 'SIGIRR', 'score': 11.74}, {'connected_gene': 'ENSG00000255237', 'score': 11.12}, {'connected_gene': 'ENSG00000254559', 'score': 10.78}, {'connected_gene': 'ODF3', 'score': 10.76}, {'connected_gene': 'SCGB1C1', 'score': 10.76}, {'connected_gene': 'TSPAN4', 'score': 10.19}, {'connected_gene': 'RPLP2', 'score': 10.08}, {'connected_gene': 'ENSG00000270972', 'score': 9.87}, {'connected_gene': 'LOC105376505', 'score': 8.29}, {'connected_gene': 'TALDO1', 'score': 3.05}, {'connected_gene': 'LRRC56', 'score': 1.98}, {'connected_gene': 'DEAF1', 'score': 1.75}, {'connected_gene': 'ANO9', 'score': 1.44}, {'connected_gene': 'SIRT3', 'score': 1.32}, {'connected_gene': 'GC11M000282', 'score': 0.44}, {'connected_gene': 'MRPS24P1', 'score': 0.44}, {'connected_gene': 'GC11P000259', 'score': 0.23}]
chr11	GH11I000770	770399	774541	0.52	[{'connected_gene': 'ENSG00000255108', 'score': 54.21}, {'connected_gene': 'RPLP2', 'score': 22.47}, {'connected_gene': 'LOC171391', 'score': 9.96}, {'connected_gene': 'TMEM80', 'score': 5.36}, {'connected_gene': 'GATD1', 'score': 0.44}, {'connected_gene': 'TALDO1', 'score': 0.31}]
chr11	GH11I000761	761595	764709	1	[{'connected_gene': 'ENSG00000255108', 'score': 56.74}, {'connected_gene': 'TMEM80', 'score': 16.58}, {'connected_gene': 'PIDD1', 'score': 15.84}, {'connected_gene': 'ENSG00000255142', 'score': 14.65}, {'connected_gene': 'LOC171391', 'score': 11.15}, {'connected_gene': 'PHRF1', 'score': 10.1}, {'connected_gene': 'ENSG00000255158', 'score': 9.79}, {'connected_gene': 'TALDO1', 'score': 6.45}, {'connected_gene': 'GATD1', 'score': 0.39}]
chr11	GH11I000654	654861	655777	1.04	[{'connected_gene': 'GC11P000654', 'score': 550.77}, {'connected_gene': 'TMEM80', 'score': 35.1}, {'connected_gene': 'CDHR5', 'score': 16.91}, {'connected_gene': 'EPS8L2', 'score': 12.64}, {'connected_gene': 'DEAF1', 'score': 12.6}, {'connected_gene': 'IRF7', 'score': 12.55}, {'connected_gene': 'TALDO1', 'score': 11.88}, {'connected_gene': 'ENSG00000255142', 'score': 11.65}, {'connected_gene': 'LOC171391', 'score': 11.65}, {'connected_gene': 'GATD1', 'score': 11.65}, {'connected_gene': 'CEND1', 'score': 11.1}, {'connected_gene': 'SLC25A22', 'score': 11.1}, {'connected_gene': 'PIDD1', 'score': 11.09}, {'connected_gene': 'RPLP2', 'score': 11.09}, {'connected_gene': 'PTDSS2', 'score': 5.18}, {'connected_gene': 'CHID1', 'score': 5.08}, {'connected_gene': 'SIRT3', 'score': 2.35}, {'connected_gene': 'NLRP6', 'score': 1.29}, {'connected_gene': 'GC11P000663', 'score': 0.44}]
chr11	GH11I000743	743452	745339	0.92	[{'connected_gene': 'ENSG00000255108', 'score': 41.41}, {'connected_gene': 'LOC171391', 'score': 8.07}, {'connected_gene': 'TMEM80', 'score': 6.27}, {'connected_gene': 'EPS8L2', 'score': 5.76}, {'connected_gene': 'TALDO1', 'score': 0.77}, {'connected_gene': 'GC11P000742', 'score': 0.77}, {'connected_gene': 'GC11P000743', 'score': 0.77}, {'connected_gene': 'LOC105376509', 'score': 0.44}]
chr11	GH11I000266	266649	273455	1.74	[{'connected_gene': 'PIR53591', 'score': 550.77}, {'connected_gene': 'IFITM2', 'score': 34.33}, {'connected_gene': 'RIC8A', 'score': 32.71}, {'connected_gene': 'PSMD13', 'score': 24.67}, {'connected_gene': 'BET1L', 'score': 22.78}, {'connected_gene': 'SIRT3', 'score': 20.88}, {'connected_gene': 'PGGHG', 'score': 17.12}, {'connected_gene': 'TMEM80', 'score': 14.82}, {'connected_gene': 'ENSG00000254559', 'score': 11.41}, {'connected_gene': 'ODF3', 'score': 11.4}, {'connected_gene': 'SCGB1C1', 'score': 11.39}, {'connected_gene': 'SNORA52', 'score': 10.82}, {'connected_gene': 'NLRP6', 'score': 10.46}, {'connected_gene': 'RPLP2', 'score': 10.07}, {'connected_gene': 'PHRF1', 'score': 9.73}, {'connected_gene': 'TALDO1', 'score': 7.27}, {'connected_gene': 'IRF7', 'score': 5.5}, {'connected_gene': 'ANO9', 'score': 5.17}, {'connected_gene': 'IFITM1', 'score': 4.86}, {'connected_gene': 'SIGIRR', 'score': 4.31}, {'connected_gene': 'DEAF1', 'score': 2.3}, {'connected_gene': 'GC11P000259', 'score': 0.39}]
chr11	GH11I000737	737087	738919	1.15	[{'connected_gene': 'GC11P000742', 'score': 550.77}, {'connected_gene': 'LOC105376509', 'score': 550.77}, {'connected_gene': 'GC11P000743', 'score': 550.77}, {'connected_gene': 'LOC171391', 'score': 12.29}, {'connected_gene': 'EPS8L2', 'score': 7.59}, {'connected_gene': 'TALDO1', 'score': 7.16}, {'connected_gene': 'TMEM80', 'score': 6.68}, {'connected_gene': 'ENSG00000255108', 'score': 6.08}, {'connected_gene': 'SIGIRR', 'score': 1.99}, {'connected_gene': 'PKP3', 'score': 1.33}]