PPI network (data source: BioGrid)

Symbol A GeneA coding DNM count Symbol B GeneB coding DNM count Interaction detection method Publication Evidence
SMAD9 0 TERF1 1 two hybrid Colland F (2004) 1
VSIG1 1 TBCD 4 affinity chromatography technology Huttlin EL (2017) 1
CUL3 17 RPUSD2 1 biochemical Wan C (2015) 1
HNRNPL 3 APP 1 affinity chromatography technology Fei T (2017) 1
VPS29 0 APP 1 pull down, pull down Olah J (2011), Virok DP (2011) 2
RPUSD2 1 TBCD 4 biochemical Kristensen AR (2012) 1
NTRK1 1 TPM3 0 affinity chromatography technology Emdal KB (2015) 1
HNRNPL 3 SNX2 4 affinity chromatography technology Fei T (2017) 1
TUBB 3 TBCD 4 affinity chromatography technology Huttlin EL (2017) 1
APEH 2 NMI 3 biochemical Kristensen AR (2012) 1
STAT1 1 APEH 2 biochemical Kristensen AR (2012) 1
TBCD 4 APEH 2 biochemical Kristensen AR (2012) 1
TRIM25 5 HIST1H1C 2 affinity chromatography technology, affinity chromatography technology Choudhury NR (2017), Choudhury NR (2017) 2
NTRK1 1 TBCD 4 affinity chromatography technology Emdal KB (2015) 1
GTF2A1 1 GORASP2 1 biochemical Kristensen AR (2012) 1
TRIM25 5 TBCD 4 affinity chromatography technology Choudhury NR (2017) 1
NTRK1 1 STAT1 1 affinity chromatography technology Emdal KB (2015) 1
TRIM25 5 FAF2 4 affinity chromatography technology Choudhury NR (2017) 1
ARL2 0 PPP2CA 7 biochemical Shern JF (2003) 1
TBCD 4 HIST1H1C 2 biochemical Kristensen AR (2012) 1
CUL3 17 TBCD 4 biochemical Kristensen AR (2012) 1
NTRK1 1 ACBD3 1 affinity chromatography technology Emdal KB (2015) 1
TRIM25 5 APP 1 affinity chromatography technology Choudhury NR (2017) 1
TRIM25 5 TCP11L1 0 affinity chromatography technology Choudhury NR (2017) 1
TBCD 4 STAT3 0 biochemical Kristensen AR (2012) 1
TUBB2A 2 TUBB 3 biochemical, biochemical, affinity chromatography technology Havugimana PC (2012), Kristensen AR (2012), Huttlin EL (2017) 3
TRIM25 5 PPP2CA 7 affinity chromatography technology Choudhury NR (2017) 1
STAT1 1 SNX2 4 biochemical Kristensen AR (2012) 1
WDR12 0 TSN 1 biochemical Kristensen AR (2012) 1
TPM3 0 TPM4 0 biochemical Havugimana PC (2012) 1
RPUSD2 1 ME1 1 biochemical Kristensen AR (2012) 1
NTRK1 1 SNX2 4 affinity chromatography technology Emdal KB (2015) 1
NTRK1 1 HNRNPL 3 affinity chromatography technology Emdal KB (2015) 1
TUBB2A 2 TBCD 4 affinity chromatography technology, affinity chromatography technology Huttlin EL (2015), Huttlin EL (2017) 2
TRIM25 5 TUBB2B 2 affinity chromatography technology Choudhury NR (2017) 1
TBCD 4 WDR12 0 biochemical Kristensen AR (2012) 1
ZNF836 1 TBCD 4 affinity chromatography technology Boldt K (2016) 1
ACBD3 1 RPUSD2 1 biochemical Kristensen AR (2012) 1
POT1 2 TBCD 4 two hybrid Lee OH (2011) 1
ABCE1 2 HIST1H1C 2 affinity chromatography technology Kaerblane K (2015) 1
ATG7 2 SNX2 4 biochemical Kristensen AR (2012) 1
TRIM25 5 TUBB2A 2 affinity chromatography technology Choudhury NR (2017) 1
ACD 1 TERF1 1 affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology Ye JZ (2004), Huttlin EL (2015), Hein MY (2015), Huttlin EL (2017) 4
TBCD 4 TPM4 0 biochemical Wan C (2015) 1
TCP11L1 0 APP 1 pull down Olah J (2011) 1
GORASP2 1 ACBD3 1 biochemical Kristensen AR (2012) 1
NTRK1 1 HIST1H1C 2 affinity chromatography technology Emdal KB (2015) 1
APEH 2 HIST1H1C 2 biochemical Kristensen AR (2012) 1
GTF2A1 1 RPUSD2 1 biochemical Kristensen AR (2012) 1
SMAD9 0 TBCD 4 two hybrid Colland F (2004) 1
STAT1 1 TBCD 4 biochemical Kristensen AR (2012) 1
CRYL1 0 TBCD 4 affinity chromatography technology Huttlin EL (2017) 1
NTRK1 1 ABCE1 2 affinity chromatography technology Emdal KB (2015) 1
TRIM25 5 BSG 1 affinity chromatography technology Choudhury NR (2017) 1
PSMD5 0 APP 1 pull down Olah J (2011) 1
GORASP2 1 RPUSD2 1 biochemical Kristensen AR (2012) 1
VPS25 1 VPS29 0 biochemical Havugimana PC (2012) 1
TBCD 4 TPM3 0 biochemical Wan C (2015) 1
SNX2 4 VPS29 0 biochemical, biochemical, biochemical Havugimana PC (2012), Kristensen AR (2012), Wan C (2015) 3
ACD 1 TUBB2A 2 two hybrid Lee OH (2011) 1
MTNR1B 1 CUL3 17 two hybrid Benleulmi-Chaachoua A (2016) 1
CUL3 17 TPM3 0 affinity chromatography technology Bennett EJ (2010) 1
CUL3 17 TUBB 3 affinity chromatography technology Bennett EJ (2010) 1
TOM1 3 ME1 1 biochemical Kristensen AR (2012) 1
WDR12 0 RPUSD2 1 biochemical Kristensen AR (2012) 1
WDR12 0 TOM1 3 biochemical Kristensen AR (2012) 1
TBCD 4 TSN 1 biochemical Kristensen AR (2012) 1
NTRK1 1 NASP 3 affinity chromatography technology Emdal KB (2015) 1
TBCD 4 NMI 3 biochemical Kristensen AR (2012) 1
TRIM25 5 STAT3 0 affinity chromatography technology Choudhury NR (2017) 1
FAF2 4 CUL3 17 affinity chromatography technology Alexandru G (2008) 1
NTRK1 1 CUL3 17 affinity chromatography technology Emdal KB (2015) 1
TUBB2B 2 ARL2 0 affinity chromatography technology, affinity chromatography technology Huttlin EL (2015), Huttlin EL (2017) 2
BSG 1 TBCD 4 affinity chromatography technology, affinity chromatography technology Huttlin EL (2015), Huttlin EL (2017) 2
TBCD 4 TOM1 3 biochemical Kristensen AR (2012) 1
RPUSD2 1 APP 1 pull down, pull down Olah J (2011), Virok DP (2011) 2
NMI 3 STAT1 1 pull down Zhu M (1999) 1
NTRK1 1 ATG7 2 affinity chromatography technology Emdal KB (2015) 1
NTRK1 1 STAT3 0 affinity chromatography technology Emdal KB (2015) 1
TERF1 1 SARS 4 two hybrid Lee OH (2011) 1
TBCD 4 ZNF146 1 affinity chromatography technology Boldt K (2016) 1
GORASP2 1 CUL3 17 biochemical Kristensen AR (2012) 1
IL1R2 2 TBCD 4 affinity chromatography technology Huttlin EL (2017) 1
TBCD 4 APP 1 pull down Olah J (2011) 1
STAT1 1 SARS 4 biochemical Kristensen AR (2012) 1
NMI 3 STAT3 0 pull down Zhu M (1999) 1
ACBD3 1 SARS 4 biochemical Kristensen AR (2012) 1
ME1 1 NMI 3 biochemical Kristensen AR (2012) 1
NTRK1 1 TUBB 3 affinity chromatography technology Emdal KB (2015) 1
VPS25 1 WDR12 0 biochemical Kristensen AR (2012) 1
TBCD 4 TCP11L1 0 affinity chromatography technology Boldt K (2016) 1
TRIM25 5 HNRNPL 3 affinity chromatography technology Choudhury NR (2017) 1
TERF1 1 TUBB2A 2 two hybrid Lee OH (2011) 1
ACBD3 1 WDR12 0 biochemical Kristensen AR (2012) 1
ABCE1 2 TBCD 4 affinity chromatography technology Kaerblane K (2015) 1
KRAS 1 TBCD 4 genetic interference Luo J (2009) 1
KRAS 1 APP 1 pull down Olah J (2011) 1
NTRK1 1 APEH 2 affinity chromatography technology Emdal KB (2015) 1
SCN2B 1 TBCD 4 affinity chromatography technology, affinity chromatography technology Huttlin EL (2015), Huttlin EL (2017) 2
TUBB 3 TCP11L1 0 affinity chromatography technology Huttlin EL (2017) 1
NTRK1 1 BSG 1 affinity chromatography technology Emdal KB (2015) 1
ZNF836 1 TCP11L1 0 affinity chromatography technology Boldt K (2016) 1
CUL3 17 APP 1 pull down, pull down Olah J (2011), Virok DP (2011) 2
POT1 2 ACD 1 two hybrid, two hybrid, affinity chromatography technology, affinity chromatography technology, two hybrid, pull down, affinity chromatography technology, two hybrid, two hybrid, pull down, affinity chromatography technology, affinity chromatography technology Rual JF (2005), Ye JZ (2004), Ye JZ (2004), Liu D (2004), Liu D (2004), Liu D (2004), Liu D (2004), Lee OH (2011), Lee OH (2011), Liu J (2015), Hein MY (2015), Huttlin EL (2017) 12
CUL3 17 ABCE1 2 affinity chromatography technology Bennett EJ (2010) 1
ATG7 2 NASP 3 biochemical Kristensen AR (2012) 1
POT1 2 SARS 4 two hybrid Lee OH (2011) 1
ARL2 0 TBCD 4 biochemical, pull down, affinity chromatography technology, biochemical Shern JF (2003), Bhamidipati A (2000), Bhamidipati A (2000), Wan C (2015) 4
ATG7 2 GTF2A1 1 biochemical Kristensen AR (2012) 1
KRAS 1 SNX2 4 genetic interference Luo J (2009) 1
NTRK1 1 TPM4 0 affinity chromatography technology Emdal KB (2015) 1
ATG7 2 STAT1 1 biochemical Kristensen AR (2012) 1
PPP2CA 7 TBCD 4 affinity chromatography technology Shern JF (2003) 1
TBCD 4 NASP 3 biochemical Kristensen AR (2012) 1
VPS25 1 TBCD 4 biochemical Kristensen AR (2012) 1
NTRK1 1 TOM1 3 affinity chromatography technology Emdal KB (2015) 1
HNRNPL 3 TOM1 3 affinity chromatography technology Fei T (2017) 1
TRIM25 5 ATG7 2 affinity chromatography technology Choudhury NR (2017) 1
GORASP2 1 ME1 1 biochemical Kristensen AR (2012) 1
TUBB 3 ARL2 0 affinity chromatography technology Huttlin EL (2017) 1
STAT3 0 STAT1 1 affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, imaging technique, affinity chromatography technology, pull down, affinity chromatography technology Gunaje JJ (2001), Spiekermann K (2001), Xia L (2002), Chen TC (2014), Li X (2015), Ghosh MK (2005), Huttlin EL (2017) 7
NTRK1 1 TUBB2B 2 affinity chromatography technology Emdal KB (2015) 1
TRIM25 5 XRCC6 3 affinity chromatography technology Choudhury NR (2017) 1
POT1 2 TUBB2A 2 two hybrid Lee OH (2011) 1
CUL3 17 HIST1H1C 2 affinity chromatography technology Bennett EJ (2010) 1
IL17RA 3 TBCD 4 affinity chromatography technology Huttlin EL (2017) 1
PSMD5 0 TBCD 4 biochemical Wan C (2015) 1
SH3GLB2 1 TBCD 4 biochemical Kristensen AR (2012) 1
ATG7 2 APP 1 pull down Olah J (2011) 1
POLR2I 0 TBCD 4 two hybrid Wang J (2011) 1
CUL3 17 ME1 1 biochemical Kristensen AR (2012) 1
GTF2A1 1 TBCD 4 biochemical Kristensen AR (2012) 1
CUL3 17 TUBB2B 2 affinity chromatography technology Bennett EJ (2010) 1
TUBB2A 2 ZNF146 1 affinity chromatography technology Huttlin EL (2015) 1
NCR3LG1 1 TBCD 4 affinity chromatography technology Huttlin EL (2017) 1
GTF2A1 1 ME1 1 biochemical Kristensen AR (2012) 1
ME1 1 TBCD 4 biochemical Kristensen AR (2012) 1
TUBB2B 2 TBCD 4 affinity chromatography technology, affinity chromatography technology Huttlin EL (2015), Huttlin EL (2017) 2
HIST1H1C 2 WDR12 0 affinity chromatography technology, affinity chromatography technology, pull down Kim K (2008), Kim K (2008), Kim K (2008) 3
TERF1 1 PPP2CA 7 affinity chromatography technology Giannone RJ (2010) 1
VPS29 0 WDR12 0 biochemical Kristensen AR (2012) 1
NTRK1 1 SARS 4 affinity chromatography technology Emdal KB (2015) 1
TUBB2B 2 TCP11L1 0 affinity chromatography technology, affinity chromatography technology Huttlin EL (2015), Huttlin EL (2017) 2
FAF2 4 TBCD 4 affinity chromatography technology Raman M (2015) 1
HNRNPL 3 TBCD 4 affinity chromatography technology Fei T (2017) 1
POT1 2 TERF1 1 affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology Loayza D (2003), Giannone RJ (2010), Giannone RJ (2010), Huttlin EL (2015), Hein MY (2015), Hein MY (2015), Huttlin EL (2017) 7
ATG7 2 SARS 4 biochemical Kristensen AR (2012) 1
SARS 4 TRIM25 5 biochemical Wan C (2015) 1
VPS29 0 STAT1 1 biochemical Kristensen AR (2012) 1
ACBD3 1 TBCD 4 biochemical Kristensen AR (2012) 1
SARS 4 GTF2A1 1 biochemical Kristensen AR (2012) 1
NCR3LG1 1 ARL2 0 affinity chromatography technology Huttlin EL (2017) 1
MTNR1B 1 TBCD 4 two hybrid Benleulmi-Chaachoua A (2016) 1
CUL3 17 ACBD3 1 affinity chromatography technology, biochemical Bennett EJ (2010), Kristensen AR (2012) 2
CUL3 17 PPP2CA 7 affinity chromatography technology Bennett EJ (2010) 1
NTRK1 1 XRCC6 3 affinity chromatography technology Emdal KB (2015) 1
TUBB2B 2 ZNF146 1 affinity chromatography technology Huttlin EL (2015) 1
TERF1 1 TBCD 4 two hybrid Lee OH (2011) 1
LRRC4 5 TBCD 4 affinity chromatography technology Huttlin EL (2017) 1
ACD 1 XRCC6 3 two hybrid Stelzl U (2005) 1
GORASP2 1 APP 1 pull down Olah J (2011) 1
TUBB 3 APP 1 pull down Olah J (2011) 1
SARS 4 TBCD 4 biochemical Kristensen AR (2012) 1
ABCE1 2 TSN 1 affinity chromatography technology Kaerblane K (2015) 1
CUL3 17 HNRNPL 3 affinity chromatography technology Bennett EJ (2010) 1
TBCD 4 SNX2 4 biochemical Kristensen AR (2012) 1
CUL3 17 TUBB2A 2 affinity chromatography technology Bennett EJ (2010) 1
NTRK1 1 PPP2CA 7 affinity chromatography technology Emdal KB (2015) 1
SH3GLB2 1 RPUSD2 1 biochemical Kristensen AR (2012) 1
HNRNPL 3 ATG7 2 affinity chromatography technology Fei T (2017) 1
TBCD 4 VPS29 0 biochemical Kristensen AR (2012) 1
TSN 1 VPS29 0 biochemical Havugimana PC (2012) 1
ACD 1 TBCD 4 two hybrid Lee OH (2011) 1
GORASP2 1 TBCD 4 biochemical Kristensen AR (2012) 1
TOM1 3 APP 1 pull down Olah J (2011) 1
XRCC6 3 POT1 2 affinity chromatography technology Hein MY (2015) 1
CUL3 17 BSG 1 affinity chromatography technology Bennett EJ (2010) 1
TBCD 4 XRCC6 3 two hybrid Stelzl U (2005) 1
TUBB2A 2 ARL2 0 affinity chromatography technology, affinity chromatography technology Huttlin EL (2015), Huttlin EL (2017) 2
HTR6 3 TBCD 4 affinity chromatography technology Meffre J (2012) 1
SNX2 4 TSN 1 biochemical Wan C (2015) 1
ATG7 2 TBCD 4 biochemical Kristensen AR (2012) 1