PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000473763	[[12685438, 12685595], [12693911, 12694303]]	[[12693996, 12694303]]
ENST00000459790	[[12693308, 12693478], [12693911, 12694487]]	None
ENST00000381137	[[12693385, 12693478], [12693911, 12694381], [12695514, 12695837], [12702270, 12702442], [12704532, 12704705], [12707996, 12708143], [12708976, 12710266]]	[[12695794, 12695837], [12702270, 12702442], [12704532, 12704705], [12707996, 12708143], [12708976, 12709182]]
ENST00000388918	[[12693434, 12693478], [12693911, 12694381], [12695514, 12695837], [12698450, 12698655], [12702270, 12702438], [12704525, 12704705], [12707996, 12708143], [12708976, 12710290]]	[[12693996, 12694381], [12695514, 12695837], [12698450, 12698655], [12702270, 12702438], [12704525, 12704705], [12707996, 12708143], [12708976, 12709182]]
ENST00000381136	[[12695719, 12695837], [12702270, 12702438], [12704525, 12704705], [12707996, 12708143], [12708976, 12709235]]	[[12695794, 12695837], [12702270, 12702438], [12704525, 12704705], [12707996, 12708143], [12708976, 12709182]]
ENST00000381142	[[12698505, 12698655], [12702270, 12702438], [12704525, 12704705], [12708976, 12709267]]	None
ENST00000470909	[[12701644, 12701815], [12702270, 12702442]]	None
ENST00000473504	[[12707670, 12708143], [12708976, 12709294]]	None
NM_000550	[[12693385, 12693478], [12693911, 12694381], [12695514, 12695837], [12698450, 12698655], [12702270, 12702438], [12704525, 12704705], [12707996, 12708143], [12708976, 12710266]]	[[12693996, 12694381], [12695514, 12695837], [12698450, 12698655], [12702270, 12702438], [12704525, 12704705], [12707996, 12708143], [12708976, 12709182]]

Promoter

Chrom	Start	End	Description
chr9	12685478	12685491	CAGE_peak_23_at_TYRP1_5end
chr9	12685502	12685507	CAGE_peak_43_at_TYRP1_5end
chr9	12685513	12685519	CAGE_peak_41_at_TYRP1_5end
chr9	12693225	12693228	CAGE_peak_17_at_TYRP1_5end
chr9	12693260	12693263	CAGE_peak_37_at_TYRP1_5end
chr9	12693272	12693281	CAGE_peak_25_at_TYRP1_5end
chr9	12693291	12693298	CAGE_peak_33_at_TYRP1_5end
chr9	12693305	12693317	CAGE_peak_10_at_TYRP1_5end
chr9	12693336	12693460	CAGE_peak_1_at_TYRP1_5end
chr9	12693544	12693551	CAGE_peak_26_at_TYRP1_5end
chr9	12693559	12693562	CAGE_peak_22_at_TYRP1_5end
chr9	12693574	12693586	CAGE_peak_4_at_TYRP1_5end
chr9	12693929	12693940	CAGE_peak_6_at_TYRP1_5end
chr9	12694022	12694033	CAGE_peak_15_at_TYRP1_5end
chr9	12694192	12694201	CAGE_peak_13_at_TYRP1_5end
chr9	12694221	12694237	CAGE_peak_2_at_TYRP1_5end
chr9	12695566	12695573	CAGE_peak_28_at_TYRP1_5end
chr9	12695585	12695593	CAGE_peak_24_at_TYRP1_5end
chr9	12695636	12695648	CAGE_peak_11_at_TYRP1_5end
chr9	12695659	12695660	CAGE_peak_31_at_TYRP1_5end
chr9	12695674	12695681	CAGE_peak_36_at_TYRP1_5end
chr9	12695702	12695719	CAGE_peak_3_at_TYRP1_5end
chr9	12695726	12695759	CAGE_peak_5_at_TYRP1_5end
chr9	12695764	12695782	CAGE_peak_7_at_TYRP1_5end
chr9	12695789	12695802	CAGE_peak_14_at_TYRP1_5end
chr9	12698311	12698315	CAGE_peak_39_at_TYRP1_5end
chr9	12698444	12698487	CAGE_peak_8_at_TYRP1_5end
chr9	12698499	12698524	CAGE_peak_9_at_TYRP1_5end
chr9	12698542	12698573	CAGE_peak_16_at_TYRP1_5end
chr9	12698593	12698608	CAGE_peak_20_at_TYRP1_5end
chr9	12701182	12701196	CAGE_peak_19_at_TYRP1_5end
chr9	12701203	12701216	CAGE_peak_18_at_TYRP1_5end
chr9	12701221	12701232	CAGE_peak_30_at_TYRP1_5end
chr9	12701254	12701275	CAGE_peak_12_at_TYRP1_5end
chr9	12701351	12701368	CAGE_peak_21_at_TYRP1_5end
chr9	12701369	12701379	CAGE_peak_29_at_TYRP1_5end
chr9	12701618	12701630	CAGE_peak_44_at_TYRP1_5end
chr9	12701691	12701717	CAGE_peak_34_at_TYRP1_5end
chr9	12708011	12708027	CAGE_peak_27_at_TYRP1_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr9	GH09I012707	12707978	12709331	0.6	[{'connected_gene': 'TYRP1', 'score': 8.33}, {'connected_gene': 'RN7SL849P', 'score': 0.22}, {'connected_gene': 'LURAP1L-AS1', 'score': 0.14}]
chr9	GH09I012698	12698421	12698570	0.31	[{'connected_gene': 'TYRP1', 'score': 0.39}, {'connected_gene': 'RN7SL849P', 'score': 0.2}]
chr9	GH09I012693	12693403	12693462	0.5	[{'connected_gene': 'TYRP1', 'score': 550.44}, {'connected_gene': 'RN7SL849P', 'score': 0.19}]
chr9	GH09I012697	12697506	12698285	0.64	[{'connected_gene': 'TYRP1', 'score': 0.39}, {'connected_gene': 'RN7SL849P', 'score': 0.2}]
chr9	GH09I012699	12699213	12699340	0.42	[{'connected_gene': 'TYRP1', 'score': 15.96}, {'connected_gene': 'RN7SL849P', 'score': 0.2}]
chr9	GH09I012694	12693886	12693945	0.5	[{'connected_gene': 'TYRP1', 'score': 550.44}, {'connected_gene': 'RN7SL849P', 'score': 0.19}]
chr9	GH09I012684	12684540	12685670	0.43	[{'connected_gene': 'TYRP1', 'score': 550.77}, {'connected_gene': 'GC09P012594', 'score': 0.16}]
chr9	GH09I012679	12679232	12679377	0.22	[{'connected_gene': 'TYRP1', 'score': 21.06}, {'connected_gene': 'GC09P012594', 'score': 0.17}]
chr9	GH09I012771	12771400	12773138	0.4	[{'connected_gene': 'LURAP1L', 'score': 6.03}, {'connected_gene': 'TYRP1', 'score': 5.73}, {'connected_gene': 'LURAP1L-AS1', 'score': 5.38}, {'connected_gene': 'RN7SL849P', 'score': 0.44}]
chr9	GH09I012748	12748082	12748231	0.38	[{'connected_gene': 'LURAP1L', 'score': 10.52}, {'connected_gene': 'RN7SL849P', 'score': 0.37}, {'connected_gene': 'TYRP1', 'score': 0.21}, {'connected_gene': 'LURAP1L-AS1', 'score': 0.2}]
chr9	GH09I012718	12718176	12719291	0.66	[{'connected_gene': 'LURAP1L', 'score': 10.62}, {'connected_gene': 'LURAP1L-AS1', 'score': 10.34}, {'connected_gene': 'TYRP1', 'score': 0.29}, {'connected_gene': 'RN7SL849P', 'score': 0.25}]
chr9	GH09I012759	12759934	12759991	0.38	[{'connected_gene': 'RN7SL849P', 'score': 0.44}, {'connected_gene': 'LURAP1L-AS1', 'score': 0.23}, {'connected_gene': 'TYRP1', 'score': 0.19}]
chr9	GH09I012740	12740402	12741160	0.46	[{'connected_gene': 'LURAP1L-AS1', 'score': 5.71}, {'connected_gene': 'RN7SL849P', 'score': 0.34}, {'connected_gene': 'TYRP1', 'score': 0.22}]