PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000310836	[[115519610, 115520130], [115544034, 115544858], [115585150, 115585293], [115586835, 115586912], [115589240, 115589460], [115597080, 115599380]]	[[115544036, 115544858], [115585150, 115585293], [115586835, 115586912], [115589240, 115589460], [115597080, 115597444]]
ENST00000507710	[[115519925, 115520130], [115540578, 115540681], [115544034, 115544461]]	[[115544036, 115544461]]
ENST00000394511	[[115543522, 115544858], [115585150, 115585293], [115586835, 115586912], [115589240, 115589460], [115597080, 115597752]]	[[115544036, 115544858], [115585150, 115585293], [115586835, 115586912], [115589240, 115589460], [115597080, 115597444]]
NM_001128174	[[115519557, 115520130], [115544034, 115544858], [115585150, 115585293], [115586835, 115586912], [115589240, 115589460], [115597080, 115599381]]	[[115544036, 115544858], [115585150, 115585293], [115586835, 115586912], [115589240, 115589460], [115597080, 115597444]]
NM_001322112	[[115519557, 115520130], [115540578, 115540681], [115544034, 115544858], [115585150, 115585293], [115586835, 115586912], [115589240, 115589460], [115597080, 115599381]]	[[115544036, 115544858], [115585150, 115585293], [115586835, 115586912], [115589240, 115589460], [115597080, 115597444]]
NM_001322113	[[115519557, 115520213], [115544034, 115544858], [115585150, 115585293], [115586835, 115586912], [115589240, 115589460], [115597080, 115599381]]	[[115544036, 115544858], [115585150, 115585293], [115586835, 115586912], [115589240, 115589460], [115597080, 115597444]]
NM_001322114	[[115520440, 115520942], [115544034, 115544858], [115585150, 115585293], [115586835, 115586912], [115589240, 115589460], [115597080, 115599381]]	[[115544036, 115544858], [115585150, 115585293], [115586835, 115586912], [115589240, 115589460], [115597080, 115597444]]
NM_003360	[[115543522, 115544858], [115585150, 115585293], [115586835, 115586912], [115589240, 115589460], [115597080, 115599381]]	[[115544036, 115544858], [115585150, 115585293], [115586835, 115586912], [115589240, 115589460], [115597080, 115597444]]

Promoter

Chrom	Start	End	Description
chr4	115519490	115519496	CAGE_peak_11_at_UGT8_5end
chr4	115519550	115519571	CAGE_peak_3_at_UGT8_5end
chr4	115519577	115519631	CAGE_peak_2_at_UGT8_5end
chr4	115519723	115519752	CAGE_peak_4_at_UGT8_5end
chr4	115519778	115519787	CAGE_peak_10_at_UGT8_5end
chr4	115519868	115519882	CAGE_peak_5_at_UGT8_5end
chr4	115519894	115519983	CAGE_peak_1_at_UGT8_5end
chr4	115519998	115520008	CAGE_peak_6_at_UGT8_5end
chr4	115520059	115520073	CAGE_peak_8_at_UGT8_5end
chr4	115520084	115520095	CAGE_peak_7_at_UGT8_5end
chr4	115520096	115520107	CAGE_peak_9_at_UGT8_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr4	GH04I114561	114561365	114565943	0.31	[{'connected_gene': 'UGT8', 'score': 25.52}, {'connected_gene': 'MIR577', 'score': 11.13}, {'connected_gene': 'LOC105377380', 'score': 0.44}]
chr4	GH04I114686	114686956	114691050	0.2	[{'connected_gene': 'UGT8', 'score': 15.3}, {'connected_gene': 'MIR577', 'score': 11.19}, {'connected_gene': 'GC04M114714', 'score': 0.31}, {'connected_gene': 'GC04P114657', 'score': 0.29}]
chr4	GH04I114597	114597765	114604421	2.35	[{'connected_gene': 'UGT8', 'score': 577.01}, {'connected_gene': 'MIR577', 'score': 10.83}, {'connected_gene': 'GC04P114629', 'score': 0.31}]
chr4	GH04I114582	114582213	114583546	0.4	[{'connected_gene': 'UGT8', 'score': 25.85}, {'connected_gene': 'LOC105377380', 'score': 0.31}]
chr4	GH04I114596	114596085	114596234	0.51	[{'connected_gene': 'UGT8', 'score': 7.54}, {'connected_gene': 'LOC105377380', 'score': 0.26}]
chr4	GH04I114592	114592999	114594246	0.4	[{'connected_gene': 'UGT8', 'score': 26.3}, {'connected_gene': 'LOC105377380', 'score': 0.28}]
chr4	GH04I114594	114594390	114595720	0.38	[{'connected_gene': 'UGT8', 'score': 26.3}, {'connected_gene': 'LOC105377380', 'score': 0.28}]
chr4	GH04I114492	114492297	114493286	0.2	[{'connected_gene': 'UGT8', 'score': 11.96}, {'connected_gene': 'LOC105377379', 'score': 0.29}, {'connected_gene': 'LOC105377380', 'score': 0.21}]
chr4	GH04I114495	114494904	114496414	0.72	[{'connected_gene': 'UGT8', 'score': 12.0}, {'connected_gene': 'LOC105377379', 'score': 0.28}, {'connected_gene': 'LOC105377380', 'score': 0.21}]
chr4	GH04I114494	114494405	114494534	0.66	[{'connected_gene': 'UGT8', 'score': 9.68}, {'connected_gene': 'LOC105377379', 'score': 0.28}, {'connected_gene': 'LOC105377380', 'score': 0.21}]
chr4	GH04I114418	114418858	114418876	0.22	[{'connected_gene': 'UGT8', 'score': 6.42}, {'connected_gene': 'GC04M114430', 'score': 0.34}, {'connected_gene': 'LOC105377378', 'score': 0.23}]
chr4	GH04I114628	114628107	114648524	0.52	[{'connected_gene': 'UGT8', 'score': 18.61}, {'connected_gene': 'GC04P114633', 'score': 0.77}, {'connected_gene': 'GC04P114629', 'score': 0.44}, {'connected_gene': 'GC04P114658', 'score': 0.37}]
chr4	GH04I114613	114613487	114614356	0.69	[{'connected_gene': 'UGT8', 'score': 11.27}, {'connected_gene': 'GC04P114629', 'score': 0.37}]
chr4	GH04I114649	114649819	114663938	0.62	[{'connected_gene': 'MIR577', 'score': 550.77}, {'connected_gene': 'GC04P114657', 'score': 550.77}, {'connected_gene': 'GC04P114658', 'score': 550.77}, {'connected_gene': 'UGT8', 'score': 15.38}, {'connected_gene': 'GC04P114633', 'score': 0.34}, {'connected_gene': 'GC04M114714', 'score': 0.22}]
chr4	GH04I114691	114691928	114693620	0.2	[{'connected_gene': 'MIR577', 'score': 10.94}, {'connected_gene': 'UGT8', 'score': 5.91}, {'connected_gene': 'GC04M114714', 'score': 0.34}, {'connected_gene': 'GC04P114657', 'score': 0.28}]
chr4	GH04I114683	114683008	114685176	0.31	[{'connected_gene': 'MIR577', 'score': 11.21}, {'connected_gene': 'UGT8', 'score': 10.31}, {'connected_gene': 'GC04P114657', 'score': 0.31}, {'connected_gene': 'GC04M114714', 'score': 0.29}]
chr4	GH04I114696	114696665	114698690	0.2	[{'connected_gene': 'MIR577', 'score': 11.23}, {'connected_gene': 'UGT8', 'score': 10.44}, {'connected_gene': 'GC04M114714', 'score': 0.37}, {'connected_gene': 'GC04P114657', 'score': 0.26}]
chr4	GH04I114606	114606148	114607114	0.51	[{'connected_gene': 'MIR577', 'score': 10.84}, {'connected_gene': 'UGT8', 'score': 0.44}, {'connected_gene': 'GC04P114629', 'score': 0.34}]
chr4	GH04I114625	114625672	114627434	0.2	[{'connected_gene': 'MIR577', 'score': 11.16}, {'connected_gene': 'UGT8', 'score': 4.99}, {'connected_gene': 'GC04P114629', 'score': 0.77}]
chr4	GH04I114614	114614801	114616502	0.82	[{'connected_gene': 'GC04P114629', 'score': 0.39}, {'connected_gene': 'UGT8', 'score': 0.37}]
chr4	GH04I114622	114622583	114624705	0.2	[{'connected_gene': 'GC04P114629', 'score': 0.44}, {'connected_gene': 'UGT8', 'score': 0.31}]
chr4	GH04I114650	114649334	114649754	0.2	[{'connected_gene': 'GC04P114658', 'score': 0.44}, {'connected_gene': 'GC04P114633', 'score': 0.37}, {'connected_gene': 'UGT8', 'score': 0.23}]
chr4	GH04I114673	114673781	114674881	0.2	[{'connected_gene': 'GC04P114657', 'score': 0.37}, {'connected_gene': 'GC04M114714', 'score': 0.26}, {'connected_gene': 'UGT8', 'score': 0.18}]