PPI network (data source: BioGrid)

Symbol A GeneA coding DNM count Symbol B GeneB coding DNM count Interaction detection method Publication Evidence
SIRT7 1 APP 1 pull down Olah J (2011) 1
TWF1 2 WARS 3 biochemical Kristensen AR (2012) 1
VPS37B 2 WARS 3 biochemical Wan C (2015) 1
USP5 2 APP 1 pull down Olah J (2011) 1
XPNPEP1 4 WARS 3 biochemical Kristensen AR (2012) 1
WARS 3 PCNA 0 biochemical Kristensen AR (2012) 1
NTRK1 1 HIP1R 5 affinity chromatography technology Emdal KB (2015) 1
HARS 0 WARS 3 biochemical Wan C (2015) 1
SIRT7 1 PFAS 3 affinity chromatography technology Tsai YC (2012) 1
NUCB1 1 CTPS2 0 biochemical Kristensen AR (2012) 1
NTRK1 1 UBC 7 affinity chromatography technology Emdal KB (2015) 1
SH3GLB1 2 WARS 3 biochemical Wan C (2015) 1
TSG101 1 SARS 4 biochemical Wan C (2015) 1
NUCB1 1 WARS 3 biochemical Kristensen AR (2012) 1
NTRK1 1 CTPS2 0 affinity chromatography technology Emdal KB (2015) 1
CYLD 2 CCT3 1 affinity chromatography technology Elliott PR (2016) 1
CCDC22 1 RTRAF 0 biochemical Wan C (2015) 1
FKBP9 1 EHD1 5 biochemical Kristensen AR (2012) 1
NT5C2 1 RAD23A 1 biochemical Kristensen AR (2012) 1
WARS 3 CALU 4 biochemical Kristensen AR (2012) 1
CALU 4 AARS 5 biochemical Kristensen AR (2012) 1
WARS 3 TRIM25 5 biochemical, biochemical Havugimana PC (2012), Wan C (2015) 2
UBC 7 ADSL 5 affinity chromatography technology Matsumoto M (2005) 1
EHD1 5 GTF3C4 0 biochemical Kristensen AR (2012) 1
NTRK1 1 NT5C2 1 affinity chromatography technology Emdal KB (2015) 1
RAD23A 1 UBC 7 pull down, pull down, x-ray crystallography, pull down, x-ray crystallography, affinity chromatography technology, pull down, pull down, unspecified method, pull down, pull down, pull down, affinity chromatography technology, pull down, pull down, x-ray crystallography, pull down, pull down, pull down, x-ray crystallography, pull down, pull down Kang Y (2006), Sims JJ (2009), Kang Y (2007), Kang Y (2007), Wang Q (2003), Scanlon TC (2009), Raasi S (2003), Sokratous K (2012), Varadan R (2005), Fenner BJ (2009), Raasi S (2005), Massey LK (2004), Chen L (2006), Nathan JA (2013), Nathan JA (2013), Jung J (2014), Goh AM (2008), Castaneda CA (2013), Nakasone MA (2013), Lai MY (2012), Kristariyanto YA (2015), Zhang X (2017) 22
SIRT7 1 GART 1 affinity chromatography technology Tsai YC (2012) 1
SARS 4 WARS 3 biochemical Wan C (2015) 1
TERF1 1 KPNA2 0 affinity chromatography technology Giannone RJ (2010) 1
MDH2 0 WARS 3 two hybrid Stelzl U (2005) 1
TRIM25 5 APP 1 affinity chromatography technology Choudhury NR (2017) 1
RAD23A 1 GTF3C4 0 biochemical Kristensen AR (2012) 1
RAD23A 1 PSMA3 1 affinity chromatography technology Scanlon TC (2009) 1
FBXW11 2 CDC34 3 pull down, pull down, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology Wu K (2010), Chong RA (2014), Kim TY (2014), Coyaud E (2015), Low TY (2014) 5
WARS 3 APP 1 pull down Olah J (2011) 1
CYLD 2 UBC 7 enzymatic study, enzymatic study, enzymatic study, pull down Almeida S (2008), Bremm A (2010), Komander D (2009), Kwasna D (2018) 4
TMOD1 1 WARS 3 biochemical Wan C (2015) 1
SIRT7 1 USP5 2 affinity chromatography technology Tsai YC (2012) 1
NTRK1 1 NIPSNAP2 1 affinity chromatography technology Emdal KB (2015) 1
HERC4 0 UBC 7 enzymatic study Sheng Y (2012) 1
TRIM25 5 CCT3 1 affinity chromatography technology, affinity chromatography technology Choudhury NR (2017), Choudhury NR (2017) 2
NTRK1 1 TMOD1 1 affinity chromatography technology Emdal KB (2015) 1
WARS 3 RABIF 0 biochemical Wan C (2015) 1
PSMA3 1 CCT3 1 affinity chromatography technology Fedorova OA (2011) 1
EHD1 5 KTN1 1 biochemical Kristensen AR (2012) 1
PFAS 3 RABIF 0 biochemical Wan C (2015) 1
U2AF2 7 WARS 3 affinity chromatography technology Whisenant TC (2015) 1
RTRAF 0 HIP1R 5 biochemical Wan C (2015) 1
GART 1 WARS 3 biochemical Havugimana PC (2012) 1
NTRK1 1 U2AF2 7 affinity chromatography technology Emdal KB (2015) 1
CD81 0 WARS 3 affinity chromatography technology Perez-Hernandez D (2013) 1
FKBP9 1 GTF3C4 0 biochemical Kristensen AR (2012) 1
WARS 3 PSMG1 0 biochemical Wan C (2015) 1
GART 1 HIP1R 5 biochemical Wan C (2015) 1
PSMA3 1 MDH2 0 affinity chromatography technology Fedorova OA (2011) 1
TSG101 1 WARS 3 biochemical Wan C (2015) 1
ADSL 5 WARS 3 biochemical Kristensen AR (2012) 1
SIRT7 1 CCT3 1 affinity chromatography technology Tsai YC (2012) 1
CEP41 0 WARS 3 biochemical Wan C (2015) 1
WARS 3 CDC34 3 biochemical Kristensen AR (2012) 1
NTRK1 1 TWF1 2 affinity chromatography technology Emdal KB (2015) 1
NTRK1 1 MDH2 0 affinity chromatography technology Emdal KB (2015) 1
GTF3C4 0 XPNPEP1 4 biochemical Havugimana PC (2012) 1
CYLD 2 WARS 3 affinity chromatography technology Elliott PR (2016) 1
NUCB1 1 GTF2I 1 biochemical Kristensen AR (2012) 1
USP5 2 CDC34 3 biochemical Kristensen AR (2012) 1
TRIM25 5 CD81 0 affinity chromatography technology Choudhury NR (2017) 1
CCDC22 1 PSMG2 1 biochemical Wan C (2015) 1
WARS 3 PFAS 3 biochemical Wan C (2015) 1
SIRT7 1 DCAF13 2 affinity chromatography technology Tsai YC (2012) 1
NTRK1 1 GTF3C4 0 affinity chromatography technology Emdal KB (2015) 1
PSMA3 1 USP5 2 affinity chromatography technology Fedorova OA (2011) 1
SMCHD1 9 MVB12A 0 biochemical Wan C (2015) 1
CCDC22 1 WARS 3 biochemical Wan C (2015) 1
NT5C2 1 HERC4 0 biochemical Kristensen AR (2012) 1
NTRK1 1 GTF2I 1 affinity chromatography technology Emdal KB (2015) 1
KTN1 1 CTPS2 0 biochemical Kristensen AR (2012) 1
XPNPEP1 4 NUCB1 1 biochemical Kristensen AR (2012) 1
GTF2I 1 CCT3 1 biochemical Wan C (2015) 1
WARS 3 GNPDA1 1 biochemical Kristensen AR (2012) 1
UBC 7 XPNPEP1 4 pull down Nathan JA (2013) 1
NTRK1 1 PSMA3 1 affinity chromatography technology Emdal KB (2015) 1
GART 1 ADSL 5 biochemical Wan C (2015) 1
NTRK1 1 GART 1 affinity chromatography technology Emdal KB (2015) 1
TWF1 2 APP 1 pull down Olah J (2011) 1
HIP1R 5 TATDN1 1 biochemical Wan C (2015) 1
UBC 7 CCT3 1 affinity chromatography technology, affinity chromatography technology Matsumoto M (2005), Bish RA (2007) 2
LIG4 0 WARS 3 two hybrid, affinity chromatography technology Woods NT (2012), Woods NT (2012) 2
WARS 3 KPNA2 0 biochemical Wan C (2015) 1
WARS 3 MVB12A 0 biochemical Wan C (2015) 1
TRIM25 5 USP5 2 affinity chromatography technology Choudhury NR (2017) 1
NTRK1 1 HARS 0 affinity chromatography technology Emdal KB (2015) 1
XPNPEP1 4 GNPDA1 1 biochemical Kristensen AR (2012) 1
TRIM25 5 CTSD 0 affinity chromatography technology Choudhury NR (2017) 1
TWF1 2 XPNPEP1 4 biochemical Havugimana PC (2012) 1
CALU 4 SH3GLB1 2 biochemical Kristensen AR (2012) 1
TRIM25 5 XPNPEP1 4 affinity chromatography technology Choudhury NR (2017) 1
RTRAF 0 PSMG1 0 biochemical Wan C (2015) 1
TRIM25 5 PSMA3 1 affinity chromatography technology Choudhury NR (2017) 1
SARS 4 HARS 0 biochemical Wan C (2015) 1
WARS 3 TATDN1 1 biochemical Wan C (2015) 1
TRIM25 5 DCAF13 2 affinity chromatography technology Choudhury NR (2017) 1
NTRK1 1 WARS 3 affinity chromatography technology Emdal KB (2015) 1
TRIM25 5 HERC4 0 affinity chromatography technology Choudhury NR (2017) 1
PSMA3 1 PSMG2 1 biochemical Wan C (2015) 1
GTF2I 1 ADSL 5 biochemical Kristensen AR (2012) 1
USP5 2 HERC4 0 biochemical Kristensen AR (2012) 1
FKBP9 1 XPNPEP1 4 biochemical Kristensen AR (2012) 1
NT5C2 1 GNPDA1 1 biochemical Kristensen AR (2012) 1
USP5 2 GNPDA1 1 biochemical Kristensen AR (2012) 1
TRIM25 5 MDH2 0 affinity chromatography technology Choudhury NR (2017) 1
RTRAF 0 WARS 3 biochemical Wan C (2015) 1
XPNPEP1 4 ADSL 5 biochemical Kristensen AR (2012) 1
NIPSNAP2 1 PFAS 3 affinity chromatography technology Behrends C (2010) 1
TWF1 2 USP5 2 biochemical Kristensen AR (2012) 1
U2AF2 7 PCNA 0 affinity chromatography technology Whisenant TC (2015) 1
UBC 7 PSMA3 1 affinity chromatography technology Matsumoto M (2005) 1
TERF1 1 SARS 4 two hybrid Lee OH (2011) 1
PCNA 0 CALU 4 biochemical Kristensen AR (2012) 1
PTCH1 8 WARS 3 affinity chromatography technology Yamaki Y (2016) 1
PFAS 3 ADSL 5 biochemical Wan C (2015) 1
AARS 5 WARS 3 biochemical Kristensen AR (2012) 1
XPNPEP1 4 PCNA 0 biochemical Kristensen AR (2012) 1
NTRK1 1 XPNPEP1 4 affinity chromatography technology Emdal KB (2015) 1
NTRK1 1 AARS 5 affinity chromatography technology Emdal KB (2015) 1
USP5 2 PCNA 0 biochemical Kristensen AR (2012) 1
UBC 7 GTF2I 1 pull down Zhang X (2017) 1
PCNA 0 HERC4 0 biochemical Kristensen AR (2012) 1
MVB12A 0 VPS37B 2 affinity chromatography technology, biochemical Wunderley L (2014), Wan C (2015) 2
TRIM25 5 PCNA 0 affinity chromatography technology, affinity chromatography technology Park JM (2014), Park JM (2014) 2
CCDC22 1 TRIM25 5 biochemical, affinity chromatography technology Wan C (2015), Choudhury NR (2017) 2
PCNA 0 MDH2 0 affinity chromatography technology Naryzhny SN (2010) 1
KPNA2 0 APP 1 pull down Olah J (2011) 1
GTF2I 1 CTPS2 0 biochemical Kristensen AR (2012) 1
FKBP9 1 WARS 3 biochemical Kristensen AR (2012) 1
HIP1R 5 WARS 3 biochemical Wan C (2015) 1
CD81 0 CCT3 1 affinity chromatography technology Perez-Hernandez D (2013) 1
DDA1 1 WARS 3 affinity chromatography technology Behrends C (2010) 1
ISG15 0 WARS 3 affinity chromatography technology Zhao C (2005) 1
NTRK1 1 USP5 2 affinity chromatography technology Emdal KB (2015) 1
DUSP13 1 WARS 3 affinity chromatography technology Li X (2016) 1
NTRK1 1 SMCHD1 9 affinity chromatography technology Emdal KB (2015) 1
NTRK1 1 ADSL 5 affinity chromatography technology Emdal KB (2015) 1
USP5 2 WARS 3 biochemical Kristensen AR (2012) 1
ISG15 0 TRIM25 5 affinity chromatography technology, affinity chromatography technology Zou W (2007), Zou W (2007) 2
CEP41 0 HIP1R 5 biochemical Wan C (2015) 1
NTRK1 1 CCT3 1 affinity chromatography technology Emdal KB (2015) 1
GART 1 PFAS 3 biochemical Wan C (2015) 1
TSG101 1 TRIM25 5 biochemical Wan C (2015) 1
USP5 2 UBC 7 pull down, affinity chromatography technology, enzymatic study, enzymatic study, enzymatic study, pull down, pull down, pull down, pull down, pull down, pull down, unspecified method, affinity chromatography technology, pull down, x-ray crystallography, pull down, pull down, pull down, enzymatic study, enzymatic study, pull down, pull down Reyes-Turcu FE (2008), Nicassio F (2007), Zhang YH (2012), Bremm A (2010), Komander D (2009), Melandri F (1996), Sokratous K (2012), Fenner BJ (2009), Schulz S (2012), Raasi S (2005), Nathan JA (2013), Ernst A (2013), Bish RA (2007), Reyes-Turcu FE (2006), Reyes-Turcu FE (2006), Zhang YH (2012), Liu Y (2014), Scott D (2015), Flierman D (2016), Castaneda CA (2016), Zhang X (2017), Kwasna D (2018) 22
WARS 3 CCT3 1 biochemical Wan C (2015) 1
SH3GLB1 2 APP 1 pull down Olah J (2011) 1
NTRK1 1 KTN1 1 affinity chromatography technology Emdal KB (2015) 1
MVB12A 0 APP 1 pull down Olah J (2011) 1
CCDC22 1 PSMG1 0 biochemical Wan C (2015) 1
PCNA 0 RAD23A 1 biochemical Kristensen AR (2012) 1
WARS 3 DNMT3B 3 two hybrid Vinayagam A (2011) 1
TRIM25 5 KPNA2 0 affinity chromatography technology Choudhury NR (2017) 1
CDA 0 WARS 3 biochemical Wan C (2015) 1
EHD1 5 EHD4 1 biochemical, biochemical Havugimana PC (2012), Kristensen AR (2012) 2
CDC34 3 RAD23A 1 biochemical Kristensen AR (2012) 1
SIRT7 1 WARS 3 affinity chromatography technology Tsai YC (2012) 1
HARS 0 CALU 4 biochemical Kristensen AR (2012) 1
TERF1 1 WARS 3 two hybrid Lee OH (2011) 1
GART 1 KPNA2 0 two hybrid Wang J (2011) 1
ADSL 5 TWF1 2 biochemical Kristensen AR (2012) 1
EHD1 5 XPNPEP1 4 biochemical Kristensen AR (2012) 1
PCNA 0 GNPDA1 1 biochemical Kristensen AR (2012) 1
NTRK1 1 TSG101 1 affinity chromatography technology Emdal KB (2015) 1
PSMG1 0 PSMG2 1 biochemical, affinity chromatography technology, affinity chromatography technology, affinity chromatography technology, biochemical, affinity chromatography technology, affinity chromatography technology Havugimana PC (2012), Hirano Y (2006), Hirano Y (2006), Huttlin EL (2015), Wan C (2015), Lee W (2015), Huttlin EL (2017) 7
FBXW11 2 WARS 3 affinity chromatography technology Low TY (2014) 1
EHD1 5 WARS 3 biochemical, biochemical Kristensen AR (2012), Wan C (2015) 2
PSMG1 0 EHD4 1 biochemical Kristensen AR (2012) 1
SIRT7 1 SMCHD1 9 affinity chromatography technology Tsai YC (2012) 1
TRIM25 5 HIP1R 5 affinity chromatography technology Choudhury NR (2017) 1
NTRK1 1 PFAS 3 affinity chromatography technology Emdal KB (2015) 1
KTN1 1 WARS 3 biochemical Kristensen AR (2012) 1
GNPDA1 1 RAD23A 1 biochemical Kristensen AR (2012) 1
RTRAF 0 TRIM25 5 biochemical Wan C (2015) 1
NIPSNAP2 1 WARS 3 affinity chromatography technology Behrends C (2010) 1
NTRK1 1 HSD17B12 0 affinity chromatography technology Emdal KB (2015) 1
WARS 3 HERC4 0 biochemical Kristensen AR (2012) 1
NTRK1 1 SARS 4 affinity chromatography technology Emdal KB (2015) 1
WARS 3 HSD17B12 0 biochemical Wan C (2015) 1
EHD4 1 NT5C2 1 biochemical Kristensen AR (2012) 1
CEP41 0 MVB12A 0 biochemical Wan C (2015) 1
TSG101 1 UBC 7 affinity chromatography technology, x-ray crystallography, affinity chromatography technology, pull down, x-ray crystallography, pull down, pull down Schlundt A (2009), Sundquist WI (2004), Bishop N (2002), Bishop N (2002), Pornillos O (2002), Kharitidi D (2015), Zhang X (2017) 7
FBXW11 2 KPNA2 0 affinity chromatography technology Coyaud E (2015) 1
SIRT7 1 U2AF2 7 affinity chromatography technology Tsai YC (2012) 1
TATDN1 1 GART 1 biochemical Wan C (2015) 1
SARS 4 TRIM25 5 biochemical Wan C (2015) 1
CYLD 2 MDH2 0 affinity chromatography technology Elliott PR (2016) 1
WARS 3 GTF2I 1 biochemical Kristensen AR (2012) 1
CYLD 2 PSMA3 1 affinity chromatography technology Elliott PR (2016) 1
FBXW11 2 APP 1 affinity chromatography technology Low TY (2014) 1
WARS 3 CTPS2 0 biochemical Kristensen AR (2012) 1
ADSL 5 NT5C2 1 biochemical Kristensen AR (2012) 1
NT5C2 1 WARS 3 biochemical Kristensen AR (2012) 1
NTRK1 1 KPNA2 0 affinity chromatography technology Emdal KB (2015) 1
CDA 0 TRIM25 5 biochemical Wan C (2015) 1
TRIM25 5 RAD23A 1 affinity chromatography technology Choudhury NR (2017) 1
CDC34 3 UBC 7 pull down, x-ray crystallography, enzymatic study, enzymatic study, x-ray crystallography, pull down, fluorescent resonance energy transfe, affinity chromatography technology, enzymatic study, enzymatic study Choi YS (2010), Choi YS (2010), Sheng Y (2012), Enchev RI (2012), Huang H (2014), Huang H (2014), Huang H (2014), Bish RA (2007), Chong RA (2014), Phillips AH (2013) 10
SIRT7 1 AARS 5 affinity chromatography technology Tsai YC (2012) 1
UBC 7 WARS 3 pull down Zhang X (2017) 1
NTRK1 1 HERC4 0 affinity chromatography technology Emdal KB (2015) 1
SIRT7 1 GTF2I 1 affinity chromatography technology Tsai YC (2012) 1
GNPDA1 1 CDC34 3 biochemical Kristensen AR (2012) 1
ACSS2 1 WARS 3 biochemical Wan C (2015) 1
FBXW11 2 PFAS 3 affinity chromatography technology Low TY (2014) 1
EHD4 1 WARS 3 biochemical Wan C (2015) 1
PSMG2 1 WARS 3 biochemical Wan C (2015) 1
MVB12A 0 TSG101 1 affinity chromatography technology, affinity chromatography technology, pull down, biochemical Tsunematsu T (2010), Wunderley L (2014), Wunderley L (2014), Wan C (2015) 4
EHD4 1 ADSL 5 biochemical Kristensen AR (2012) 1
ISG15 0 CCT3 1 affinity chromatography technology Zhao C (2005) 1
LIG4 0 CTSD 0 affinity chromatography technology Woods NT (2012) 1
HERC4 0 RAD23A 1 biochemical Kristensen AR (2012) 1
CCT3 1 DCAF13 2 affinity chromatography technology Huttlin EL (2017) 1
TSG101 1 TATDN1 1 biochemical Wan C (2015) 1
RAD23A 1 WARS 3 biochemical Kristensen AR (2012) 1
TSG101 1 HIP1R 5 biochemical Wan C (2015) 1
TRIM25 5 ADSL 5 affinity chromatography technology Choudhury NR (2017) 1
NT5C2 1 USP5 2 biochemical Kristensen AR (2012) 1
SARS 4 HIP1R 5 biochemical Wan C (2015) 1
FKBP9 1 HERC4 0 biochemical Kristensen AR (2012) 1
FBXW11 2 GTF2I 1 affinity chromatography technology Low TY (2014) 1
TRIM25 5 UBC 7 enzymatic study Sanchez JG (2016) 1
TSG101 1 SMCHD1 9 biochemical Wan C (2015) 1
RAD23A 1 USP5 2 affinity chromatography technology, biochemical Scanlon TC (2009), Kristensen AR (2012) 2
TRIM25 5 PFAS 3 affinity chromatography technology Choudhury NR (2017) 1
GTF3C4 0 WARS 3 biochemical Kristensen AR (2012) 1
CYLD 2 PCNA 0 affinity chromatography technology Elliott PR (2016) 1
NTRK1 1 PCNA 0 affinity chromatography technology Emdal KB (2015) 1
GTF3C4 0 EHD4 1 biochemical Kristensen AR (2012) 1
PSMA3 1 WARS 3 affinity chromatography technology Fedorova OA (2011) 1
SMCHD1 9 WARS 3 biochemical Wan C (2015) 1
NTRK1 1 EHD1 5 affinity chromatography technology Emdal KB (2015) 1
VPS37B 2 TSG101 1 pull down, two hybrid, two hybrid, affinity chromatography technology, unspecified method, affinity chromatography technology, biochemical, biochemical Bache KG (2004), Stuchell MD (2004), Stuchell MD (2004), Stuchell MD (2004), Schlundt A (2009), Agromayor M (2012), Havugimana PC (2012), Wan C (2015) 8
FKBP9 1 RAD23A 1 biochemical Kristensen AR (2012) 1
NTRK1 1 RTRAF 0 affinity chromatography technology Emdal KB (2015) 1
PTCH1 8 KPNA2 0 affinity chromatography technology Yamaki Y (2016) 1
WARS 3 DCAF13 2 two hybrid Vinayagam A (2011) 1
EHD4 1 CTPS2 0 biochemical Kristensen AR (2012) 1
U2AF2 7 MDH2 0 affinity chromatography technology Whisenant TC (2015) 1
EHD1 5 CTPS2 0 biochemical Kristensen AR (2012) 1
SMCHD1 9 TRIM25 5 biochemical, affinity chromatography technology Wan C (2015), Choudhury NR (2017) 2
DDA1 1 ADSL 5 affinity chromatography technology Behrends C (2010) 1
TRIM25 5 KTN1 1 affinity chromatography technology Choudhury NR (2017) 1
SH3GLB1 2 CCDC22 1 biochemical Wan C (2015) 1
TRIM25 5 HSD17B12 0 affinity chromatography technology Choudhury NR (2017) 1
NTRK1 1 EHD4 1 affinity chromatography technology Emdal KB (2015) 1
CCDC22 1 PFAS 3 biochemical Wan C (2015) 1
NTRK1 1 CALU 4 affinity chromatography technology Emdal KB (2015) 1
UBC 7 HSD17B12 0 affinity chromatography technology Matsumoto M (2005) 1
TERF1 1 U2AF2 7 pull down, affinity chromatography technology, affinity chromatography technology Kim J (2014), Kim J (2014), Kim J (2014) 3
WARS 3 CTSD 0 biochemical Wan C (2015) 1
TRIM25 5 NT5C2 1 affinity chromatography technology Choudhury NR (2017) 1