PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000374227	[[115800659, 115806548], [115811641, 115811776], [115812070, 115812152], [115818836, 115818996]]	[[115805004, 115806548], [115811641, 115811776], [115812070, 115812152], [115818836, 115818968]]
ENST00000555206	[[115804520, 115806548], [115811641, 115811776], [115812070, 115812155], [115818836, 115819039]]	[[115805004, 115806548], [115811641, 115811776], [115812070, 115812155], [115818836, 115818968]]
ENST00000553380	[[115804973, 115806548], [115811641, 115811776], [115812070, 115812197], [115818836, 115818968]]	[[115805004, 115806548], [115811641, 115811776], [115812070, 115812197], [115818836, 115818968]]
NM_001282515	[[115804094, 115806548], [115811641, 115811776], [115812070, 115812197], [115818836, 115819071]]	[[115805004, 115806548], [115811641, 115811776], [115812070, 115812197], [115818836, 115818968]]
NM_001282518	[[115804094, 115806548], [115811641, 115811776], [115812070, 115812155], [115818836, 115819071]]	[[115805004, 115806548], [115811641, 115811776], [115812070, 115812155], [115818836, 115818968]]
NM_003408	[[115804094, 115806548], [115811641, 115811776], [115812070, 115812152], [115818836, 115819071]]	[[115805004, 115806548], [115811641, 115811776], [115812070, 115812152], [115818836, 115818968]]

Promoter

Chrom	Start	End	Description
chr9	115818951	115819011	CAGE_peak_1_at_ZFP37_5end
chr9	115819058	115819082	CAGE_peak_2_at_ZFP37_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr9	GH09I113011	113011601	113012830	1.1	[{'connected_gene': 'PRPF4', 'score': 20.71}, {'connected_gene': 'ZFP37', 'score': 12.5}, {'connected_gene': 'CDC26', 'score': 11.57}, {'connected_gene': 'ZNF618', 'score': 11.46}, {'connected_gene': 'PIR31639', 'score': 0.37}, {'connected_gene': 'ZNF883', 'score': 0.28}]
chr9	GH09I112336	112336227	112339298	0.97	[{'connected_gene': 'ZFP37', 'score': 20.11}, {'connected_gene': 'SUSD1', 'score': 18.28}, {'connected_gene': 'ZNF483', 'score': 15.96}, {'connected_gene': 'HSDL2', 'score': 7.7}, {'connected_gene': 'PTBP3', 'score': 0.77}, {'connected_gene': 'GC09M112353', 'score': 0.37}]
chr9	GH09I113055	113055801	113057410	1.97	[{'connected_gene': 'ZFP37', 'score': 558.41}, {'connected_gene': 'ZNF883', 'score': 0.44}]
chr9	GH09I113952	113952239	113959055	1.04	[{'connected_gene': 'ZFP37', 'score': 14.98}, {'connected_gene': 'ZNF618', 'score': 5.77}, {'connected_gene': 'GC09P114664', 'score': 0.15}]
chr9	GH09I112762	112761158	112761483	0.46	[{'connected_gene': 'INIP', 'score': 11.04}, {'connected_gene': 'ENSG00000226609', 'score': 6.2}, {'connected_gene': 'ZFP37', 'score': 2.06}, {'connected_gene': 'SNX30', 'score': 0.39}, {'connected_gene': 'PIR49803', 'score': 0.14}]
chr9	GH09I112747	112747032	112747460	1.06	[{'connected_gene': 'INIP', 'score': 12.07}, {'connected_gene': 'SNX30', 'score': 2.12}, {'connected_gene': 'KIAA1958', 'score': 2.03}, {'connected_gene': 'ZFP37', 'score': 1.54}, {'connected_gene': 'ZNF883', 'score': 1.39}]
chr9	GH09I112843	112843633	112843648	0.24	[{'connected_gene': 'SLC46A2', 'score': 12.15}, {'connected_gene': 'SNX30', 'score': 10.0}, {'connected_gene': 'ENSG00000226609', 'score': 10.0}, {'connected_gene': 'ZFP37', 'score': 1.22}, {'connected_gene': 'PIR49803', 'score': 0.31}]
chr9	GH09I112845	112844404	112844483	0.54	[{'connected_gene': 'SLC46A2', 'score': 12.15}, {'connected_gene': 'SNX30', 'score': 10.0}, {'connected_gene': 'ENSG00000226609', 'score': 10.0}, {'connected_gene': 'ZFP37', 'score': 2.23}, {'connected_gene': 'PIR49803', 'score': 0.31}]
chr9	GH09I113613	113613852	113617841	1.16	[{'connected_gene': 'LOC105376222', 'score': 550.77}, {'connected_gene': 'ENSG00000282897', 'score': 550.77}, {'connected_gene': 'C9orf43', 'score': 26.93}, {'connected_gene': 'ZFP37', 'score': 13.09}, {'connected_gene': 'ZNF618', 'score': 9.91}, {'connected_gene': 'POLE3', 'score': 6.58}, {'connected_gene': 'ALAD', 'score': 5.21}]