PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000374433	[[44139306, 44140249], [44141511, 44141650], [44144249, 44144304]]	[[44139497, 44140249], [44141511, 44141581]]
ENST00000395797	[[44139307, 44140249], [44141511, 44141650], [44144032, 44144152]]	[[44139497, 44140249], [44141511, 44141581]]
ENST00000485351	[[44140096, 44140249], [44141405, 44141723]]	None
NM_001324165	[[44139306, 44140249], [44141405, 44141650], [44144032, 44144247]]	[[44139497, 44140249], [44141405, 44141487]]
NM_001324168	[[44139306, 44140249], [44141507, 44141650], [44144032, 44144247]]	[[44139497, 44140244]]
NM_001005368	[[44139306, 44140249], [44141511, 44141650], [44144032, 44144247]]	[[44139497, 44140249], [44141511, 44141581]]
NM_001324164	[[44139306, 44140249], [44141405, 44141650], [44144249, 44144326]]	[[44139497, 44140249], [44141405, 44141487]]
NM_001324166	[[44139306, 44140249], [44141503, 44141650], [44144249, 44144326]]	[[44139497, 44140244]]
NM_001324167	[[44139306, 44140249], [44141507, 44141650], [44144249, 44144326]]	[[44139497, 44140244]]
NM_006973	[[44139306, 44140249], [44141511, 44141650], [44144249, 44144326]]	[[44139497, 44140249], [44141511, 44141581]]

Promoter

Chrom	Start	End	Description
chr10	44144187	44144201	CAGE_peak_3_at_ZNF32_5end
chr10	44144219	44144230	CAGE_peak_5_at_ZNF32_5end
chr10	44144240	44144252	CAGE_peak_4_at_ZNF32_5end
chr10	44144264	44144286	CAGE_peak_2_at_ZNF32_5end
chr10	44144292	44144338	CAGE_peak_1_at_ZNF32_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr10	GH10I042781	42781680	42783841	2.14	[{'connected_gene': 'BMS1', 'score': 609.81}, {'connected_gene': 'GC10M042779', 'score': 550.77}, {'connected_gene': 'ZNF32-AS2', 'score': 45.72}, {'connected_gene': 'ENSG00000273008', 'score': 42.03}, {'connected_gene': 'HNRNPF', 'score': 41.87}, {'connected_gene': 'EIF3LP2', 'score': 37.28}, {'connected_gene': 'ZNF32-AS1', 'score': 33.47}, {'connected_gene': 'ZNF37BP', 'score': 30.76}, {'connected_gene': 'ZNF32', 'score': 27.06}, {'connected_gene': 'LOC100130881', 'score': 23.5}, {'connected_gene': 'ZNF239', 'score': 21.23}, {'connected_gene': 'LOC441666', 'score': 15.79}, {'connected_gene': 'ZNF487', 'score': 10.12}, {'connected_gene': 'LINC00839', 'score': 7.02}, {'connected_gene': 'ENSG00000259869', 'score': 6.54}, {'connected_gene': 'GC10M042762', 'score': 0.39}]
chr10	GH10I043671	43671733	43671915	0.74	[{'connected_gene': 'ZNF32', 'score': 11.56}, {'connected_gene': 'CXCL12', 'score': 10.71}, {'connected_gene': 'LINC00619', 'score': 10.25}, {'connected_gene': 'ENSG00000228426', 'score': 0.44}, {'connected_gene': 'PIR60234', 'score': 0.34}, {'connected_gene': 'GC10M043601', 'score': 0.29}, {'connected_gene': 'ZNF32-AS3', 'score': 0.26}]
chr10	GH10I043689	43689046	43690905	1.37	[{'connected_gene': 'ZNF32', 'score': 11.46}, {'connected_gene': 'CXCL12', 'score': 10.85}, {'connected_gene': 'PIR60234', 'score': 0.77}, {'connected_gene': 'GC10M043601', 'score': 0.39}, {'connected_gene': 'ENSG00000228426', 'score': 0.34}]
chr10	GH10I043613	43613166	43614491	0.2	[{'connected_gene': 'ZNF32', 'score': 11.36}, {'connected_gene': 'ZNF32-AS2', 'score': 11.07}, {'connected_gene': 'ZNF239', 'score': 7.82}, {'connected_gene': 'ENSG00000229116', 'score': 5.99}, {'connected_gene': 'ZNF485', 'score': 0.44}, {'connected_gene': 'PIR33135', 'score': 0.39}, {'connected_gene': 'GC10M043601', 'score': 0.17}]
chr10	GH10I043392	43392519	43410859	2.83	[{'connected_gene': 'HNRNPF', 'score': 590.81}, {'connected_gene': 'EIF3LP2', 'score': 52.89}, {'connected_gene': 'BMS1', 'score': 52.73}, {'connected_gene': 'ZNF32-AS2', 'score': 46.32}, {'connected_gene': 'HNRNPA3P1', 'score': 44.36}, {'connected_gene': 'ZNF37BP', 'score': 34.94}, {'connected_gene': 'ZNF33B', 'score': 32.19}, {'connected_gene': 'ZNF32-AS1', 'score': 31.5}, {'connected_gene': 'ZNF32', 'score': 20.89}, {'connected_gene': 'LOC105378272', 'score': 16.36}, {'connected_gene': 'ENSG00000273008', 'score': 15.39}, {'connected_gene': 'ZNF239', 'score': 13.19}, {'connected_gene': 'RASGEF1A', 'score': 4.7}, {'connected_gene': 'PIR56810', 'score': 0.39}]
chr10	GH10I043605	43605833	43607490	1.96	[{'connected_gene': 'ZNF485', 'score': 550.77}, {'connected_gene': 'CAP1P2', 'score': 550.77}, {'connected_gene': 'ZNF32', 'score': 11.31}, {'connected_gene': 'PIR33135', 'score': 0.37}, {'connected_gene': 'GC10M043601', 'score': 0.15}]
chr10	GH10I043647	43647193	43649600	1.96	[{'connected_gene': 'LOC105378274', 'score': 550.77}, {'connected_gene': 'ZNF32', 'score': 550.77}, {'connected_gene': 'ZNF32-AS2', 'score': 14.48}, {'connected_gene': 'BMS1', 'score': 12.71}, {'connected_gene': 'ENSG00000273008', 'score': 10.49}, {'connected_gene': 'ZNF32-AS3', 'score': 0.37}, {'connected_gene': 'GC10M043601', 'score': 0.23}]
chr10	GH10I043672	43672233	43672382	0.31	[{'connected_gene': 'ENSG00000228426', 'score': 14.37}, {'connected_gene': 'ZNF32', 'score': 11.56}, {'connected_gene': 'CXCL12', 'score': 10.71}, {'connected_gene': 'LINC00619', 'score': 10.25}, {'connected_gene': 'PIR60234', 'score': 0.34}, {'connected_gene': 'GC10M043601', 'score': 0.29}, {'connected_gene': 'ZNF32-AS3', 'score': 0.26}]