PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Promoter

Chrom	Start	End	Description
chr11	3400340	3400422	CAGE_peak_1_at_ZNF195_5end
chr11	3400442	3400453	CAGE_peak_2_at_ZNF195_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr11	GH11I003339	3339372	3341012	0.82	[{'connected_gene': 'ZNF195', 'score': 12.23}, {'connected_gene': 'TSSC2', 'score': 12.22}, {'connected_gene': 'ENSG00000224513', 'score': 10.95}, {'connected_gene': 'MRGPRG', 'score': 10.94}, {'connected_gene': 'MRGPRG-AS1', 'score': 10.94}, {'connected_gene': 'RNU1-91P', 'score': 10.08}, {'connected_gene': 'NAP1L4', 'score': 9.93}, {'connected_gene': 'SNORA54', 'score': 9.93}, {'connected_gene': 'ART5', 'score': 9.75}, {'connected_gene': 'ART1', 'score': 9.75}, {'connected_gene': 'OR7E12P', 'score': 9.16}, {'connected_gene': 'ENSG00000254592', 'score': 0.77}, {'connected_gene': 'GC11M003340', 'score': 0.77}]
chr11	GH11I003377	3377522	3382131	2.25	[{'connected_gene': 'TSSC2', 'score': 584.22}, {'connected_gene': 'ZNF195', 'score': 583.4}, {'connected_gene': 'NUP98', 'score': 21.74}, {'connected_gene': 'RRM1', 'score': 13.6}, {'connected_gene': 'TSSC4', 'score': 13.25}]
chr11	GH11I003341	3341411	3341420	0.6	[{'connected_gene': 'GC11M003340', 'score': 550.77}, {'connected_gene': 'TSSC2', 'score': 12.23}, {'connected_gene': 'ZNF195', 'score': 12.23}, {'connected_gene': 'ENSG00000224513', 'score': 10.94}, {'connected_gene': 'MRGPRG', 'score': 10.94}, {'connected_gene': 'MRGPRG-AS1', 'score': 10.94}, {'connected_gene': 'RNU1-91P', 'score': 10.08}, {'connected_gene': 'NAP1L4', 'score': 9.93}, {'connected_gene': 'SNORA54', 'score': 9.93}, {'connected_gene': 'ART5', 'score': 9.75}, {'connected_gene': 'ART1', 'score': 9.75}, {'connected_gene': 'ENSG00000254592', 'score': 0.77}]

Transcript ID	Transcript exon region	Coding exon region
ENST00000528796	[[3360490, 3361052], [3392204, 3392300], [3392806, 3392933], [3400267, 3400363]]	[[3361038, 3361052], [3392204, 3392300], [3392806, 3392933], [3400267, 3400270]]
ENST00000354599	[[3379156, 3381795], [3392204, 3392300], [3392806, 3392933], [3400267, 3400375]]	[[3380347, 3381795], [3392204, 3392300], [3392806, 3392933], [3400267, 3400270]]
ENST00000399602	[[3379995, 3381795], [3381949, 3382018], [3382972, 3383119], [3392204, 3392300], [3392806, 3392933], [3400267, 3400397]]	[[3380347, 3381795], [3381949, 3382018], [3382972, 3383119], [3392204, 3392300], [3392806, 3392933], [3400267, 3400270]]
ENST00000343338	[[3380010, 3381795], [3392204, 3392300], [3392806, 3392933], [3394806, 3394821]]	[[3380347, 3381795], [3392204, 3392300], [3392806, 3392933], [3394806, 3394821]]
ENST00000429541	[[3380174, 3381795], [3392204, 3392300], [3392806, 3392933], [3394806, 3394886], [3398846, 3399130], [3400267, 3400448]]	[[3380347, 3381795], [3392204, 3392300], [3392806, 3392933], [3394806, 3394821]]
ENST00000005082	[[3380223, 3381795], [3382972, 3383119], [3392204, 3392300], [3392806, 3392933], [3400267, 3400346]]	[[3380347, 3381795], [3382972, 3383119], [3392204, 3392300], [3392806, 3392933], [3400267, 3400270]]
ENST00000526601	[[3380346, 3381795], [3382972, 3383119], [3392204, 3392300], [3392806, 3392933], [3394806, 3394886], [3400267, 3400376]]	[[3380347, 3381795], [3382972, 3383119], [3392204, 3392300], [3392806, 3392933], [3394806, 3394821]]
ENST00000438262	[[3381226, 3381795], [3383775, 3383832], [3392204, 3392300], [3392806, 3392933], [3394806, 3394886], [3400267, 3400356]]	[[3383797, 3383832], [3392204, 3392300], [3392806, 3392933], [3394806, 3394821]]
ENST00000528410	[[3381268, 3381795], [3381949, 3382018], [3392204, 3392300], [3392806, 3392933], [3394806, 3394886], [3400267, 3400369]]	[[3381268, 3381795], [3381949, 3382018], [3392204, 3392300], [3392806, 3392933], [3394806, 3394821]]
ENST00000528218	[[3381512, 3381795], [3382972, 3383119], [3383775, 3383832], [3392204, 3392300], [3392806, 3392933], [3394806, 3394886], [3400267, 3400368]]	[[3383797, 3383832], [3392204, 3392300], [3392806, 3392933], [3394806, 3394821]]
ENST00000529789	[[3381545, 3381795], [3382972, 3383119], [3392204, 3392377]]	None
ENST00000525313	[[3381549, 3381795], [3382972, 3383119], [3392172, 3392300], [3392806, 3392933], [3400267, 3400339]]	[[3392190, 3392300], [3392806, 3392933], [3400267, 3400270]]
ENST00000533036	[[3381573, 3381795], [3382972, 3383119], [3383205, 3383262], [3392204, 3392300], [3392806, 3392933], [3400267, 3400382]]	[[3381573, 3381795], [3382972, 3383119], [3383205, 3383262], [3392204, 3392300], [3392806, 3392933], [3400267, 3400270]]
ENST00000529228	[[3381579, 3381795], [3382972, 3383119], [3383205, 3383303], [3392204, 3392301]]	[[3383241, 3383303], [3392204, 3392301]]
ENST00000526540	[[3381614, 3381795], [3381949, 3382018], [3382972, 3383119], [3383762, 3383950]]	None
ENST00000529678	[[3381640, 3381795], [3392204, 3392300], [3392806, 3392933], [3394806, 3394905], [3400267, 3400369]]	[[3381640, 3381795], [3392204, 3392300], [3392806, 3392933], [3394806, 3394821]]
ENST00000526598	[[3381645, 3381795], [3382972, 3383119], [3383775, 3384061]]	None
ENST00000528636	[[3381682, 3381795], [3387920, 3388349]]	None
ENST00000427810	[[3381707, 3381795], [3392204, 3392300], [3392806, 3392933], [3398846, 3399032], [3400267, 3400330]]	[[3381707, 3381795], [3392204, 3392300], [3392806, 3392933], [3398846, 3398894]]
ENST00000534569	[[3383012, 3383119], [3392204, 3392300], [3392806, 3392933], [3394806, 3394886], [3398846, 3399032], [3400267, 3400353]]	[[3383012, 3383119], [3392204, 3392300], [3392806, 3392933], [3394806, 3394821]]
ENST00000524857	[[3383038, 3383119], [3383762, 3383832], [3392204, 3392300], [3392806, 3392933], [3394806, 3394886], [3400267, 3400355]]	None
ENST00000530643	[[3383247, 3383303], [3383775, 3383832], [3390586, 3390732], [3392204, 3392300], [3392806, 3392933], [3400267, 3400360]]	[[3390715, 3390732], [3392204, 3392300], [3392806, 3392933], [3400267, 3400270]]
ENST00000330692	[[3384547, 3384621], [3392204, 3392300], [3392806, 3392933], [3394806, 3394886], [3400267, 3400376]]	None
ENST00000525502	[[3388073, 3388287], [3392204, 3392300], [3392806, 3392933], [3400267, 3400376]]	[[3388073, 3388287], [3392204, 3392300], [3392806, 3392933], [3400267, 3400270]]
ENST00000526501	[[3388175, 3388287], [3390021, 3390085], [3390586, 3390732], [3392204, 3392300], [3392806, 3392933], [3400267, 3400332]]	[[3390715, 3390732], [3392204, 3392300], [3392806, 3392933], [3400267, 3400270]]
ENST00000532539	[[3390050, 3390085], [3392204, 3392300], [3392806, 3392933], [3394806, 3394886], [3400267, 3400448]]	[[3390050, 3390085], [3392204, 3392300], [3392806, 3392933], [3394806, 3394821]]
ENST00000529085	[[3390470, 3390732], [3392204, 3392300], [3392806, 3392933], [3400267, 3400364]]	None
ENST00000527386	[[3392209, 3392300], [3392806, 3392933], [3394806, 3394886], [3396726, 3396892], [3400267, 3400384]]	None
NR_040083	[[3379156, 3381795], [3392204, 3392300], [3392806, 3392933], [3394806, 3394886], [3398846, 3399130], [3400267, 3400452]]	None
NR_046382	[[3379156, 3381795], [3392204, 3392300], [3392806, 3392933], [3398846, 3399032], [3400267, 3400452]]	None
NM_001256825	[[3379156, 3381795], [3392204, 3392300], [3392806, 3392933], [3394806, 3394905], [3400267, 3400452]]	[[3380347, 3381795], [3392204, 3392300], [3392806, 3392933], [3394806, 3394821]]
NR_046381	[[3379156, 3381795], [3382972, 3383119], [3383775, 3383832], [3392204, 3392300], [3392806, 3392933], [3394806, 3394886], [3400267, 3400452]]	None
NM_001256823	[[3379156, 3381795], [3383775, 3383832], [3392204, 3392300], [3392806, 3392933], [3394806, 3394886], [3400267, 3400452]]	[[3383797, 3383832], [3392204, 3392300], [3392806, 3392933], [3394806, 3394821]]
NM_001242841	[[3379156, 3381795], [3382972, 3383119], [3392204, 3392300], [3392806, 3392933], [3394806, 3394886], [3400267, 3400452]]	[[3380347, 3381795], [3382972, 3383119], [3392204, 3392300], [3392806, 3392933], [3394806, 3394821]]
NM_001256824	[[3379156, 3381795], [3383026, 3383119], [3392204, 3392300], [3392806, 3392933], [3394806, 3394886], [3400267, 3400452]]	[[3380347, 3381795], [3383026, 3383119], [3392204, 3392300], [3392806, 3392933], [3394806, 3394821]]
NM_001242842	[[3379156, 3381795], [3381949, 3382018], [3392204, 3392300], [3392806, 3392933], [3394806, 3394886], [3400267, 3400452]]	[[3380347, 3381795], [3381949, 3382018], [3392204, 3392300], [3392806, 3392933], [3394806, 3394821]]
NM_001242843	[[3379156, 3381795], [3392204, 3392300], [3392806, 3392933], [3394806, 3394886], [3400267, 3400452]]	[[3380347, 3381795], [3392204, 3392300], [3392806, 3392933], [3394806, 3394821]]
NM_001130520	[[3379156, 3381795], [3381949, 3382018], [3382972, 3383119], [3392204, 3392300], [3392806, 3392933], [3400267, 3400452]]	[[3380347, 3381795], [3381949, 3382018], [3382972, 3383119], [3392204, 3392300], [3392806, 3392933], [3400267, 3400270]]
NM_001130519	[[3379156, 3381795], [3382972, 3383119], [3392204, 3392300], [3392806, 3392933], [3400267, 3400452]]	[[3380347, 3381795], [3382972, 3383119], [3392204, 3392300], [3392806, 3392933], [3400267, 3400270]]
NM_007152	[[3379156, 3381795], [3392204, 3392300], [3392806, 3392933], [3400267, 3400452]]	[[3380347, 3381795], [3392204, 3392300], [3392806, 3392933], [3400267, 3400270]]