PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000563958	[[8715539, 8715632], [8717613, 8717752], [8719352, 8719655], [8722586, 8722665]]	[[8719522, 8719655], [8722586, 8722665]]
ENST00000381920	[[8715544, 8715632], [8719352, 8719655], [8722586, 8722967], [8728895, 8728936], [8729024, 8729169], [8732947, 8733019], [8734987, 8735041], [8735983, 8736064], [8736319, 8736422], [8738413, 8738582], [8739964, 8740079]]	[[8719522, 8719655], [8722586, 8722967], [8728895, 8728936], [8729024, 8729169], [8732947, 8733019], [8734987, 8735041], [8735983, 8736064], [8736319, 8736422], [8738413, 8738582], [8739964, 8740000]]
ENST00000163678	[[8715547, 8715632], [8719352, 8719655], [8722586, 8722967], [8729024, 8729169], [8732947, 8733019], [8734987, 8735041], [8735983, 8736064], [8736319, 8736422], [8738413, 8738582], [8739964, 8740081]]	[[8719522, 8719655], [8722586, 8722967], [8729024, 8729128]]
ENST00000564554	[[8715566, 8715632], [8717709, 8717975], [8719352, 8719570]]	[[8719522, 8719570]]
ENST00000561758	[[8715585, 8715632], [8719352, 8719655], [8722586, 8722733], [8722901, 8722967], [8728895, 8728936], [8729024, 8729169], [8732947, 8733019], [8734987, 8735041], [8735983, 8736064], [8736319, 8736422], [8738413, 8738582], [8739964, 8740048]]	[[8719522, 8719655], [8722586, 8722733], [8722901, 8722967], [8728895, 8728936], [8729024, 8729169], [8732947, 8733019], [8734987, 8735041], [8735983, 8736064], [8736319, 8736422], [8738413, 8738582], [8739964, 8740000]]
ENST00000567295	[[8715588, 8715632], [8719352, 8719655], [8722756, 8722967], [8728895, 8728936], [8729024, 8729139]]	[[8719522, 8719655], [8722756, 8722767]]
ENST00000563037	[[8717458, 8717975], [8719352, 8719432]]	None
ENST00000568967	[[8725103, 8725995], [8728895, 8728936], [8729024, 8729169], [8732947, 8733019], [8734987, 8735041], [8735983, 8736064], [8736319, 8736422], [8738413, 8738582], [8739964, 8740079]]	None
ENST00000564624	[[8729024, 8729169], [8732947, 8733062]]	None
ENST00000572956	[[8729081, 8729169], [8732947, 8733019], [8734987, 8735041], [8735983, 8736064], [8736319, 8736422], [8738385, 8738582], [8739964, 8740075]]	[[8729081, 8729169], [8732947, 8733019], [8734987, 8735041], [8735983, 8736064], [8736319, 8736422], [8738385, 8738452]]
ENST00000561993	[[8732963, 8733019], [8734987, 8735041], [8735983, 8736064], [8736319, 8736784]]	None
ENST00000563501	[[8733090, 8733533], [8734987, 8735041], [8735983, 8736005]]	None
ENST00000565866	[[8734987, 8735041], [8735259, 8735302], [8735983, 8736064], [8736319, 8736422], [8738413, 8738582], [8739964, 8740075]]	[[8734987, 8735041], [8735259, 8735302], [8735983, 8736026]]
ENST00000562151	[[8734994, 8735041], [8735983, 8736064], [8736319, 8736422], [8738413, 8738582], [8739764, 8739884]]	[[8734994, 8735041], [8735983, 8736064], [8736319, 8736422], [8738413, 8738582], [8739764, 8739860]]
ENST00000564107	[[8735479, 8735636], [8735983, 8736064], [8736319, 8736422], [8738413, 8738510]]	None
ENST00000564133	[[8735734, 8736064], [8736319, 8736396]]	None
ENST00000562973	[[8736324, 8736422], [8738413, 8738901]]	[[8736324, 8736422], [8738413, 8738627]]
ENST00000569597	[[8738293, 8738582], [8739964, 8740079]]	None
NR_134608	[[8715496, 8715632], [8719352, 8719655], [8722586, 8722967], [8729024, 8729169], [8732947, 8733019], [8734987, 8735041], [8735983, 8736064], [8736319, 8736422], [8738413, 8738582], [8739964, 8740079]]	None
NM_024109	[[8715496, 8715632], [8719352, 8719655], [8722586, 8722967], [8728895, 8728936], [8729024, 8729169], [8732947, 8733019], [8734987, 8735041], [8735983, 8736064], [8736319, 8736422], [8738413, 8738582], [8739964, 8740079]]	[[8719522, 8719655], [8722586, 8722967], [8728895, 8728936], [8729024, 8729169], [8732947, 8733019], [8734987, 8735041], [8735983, 8736064], [8736319, 8736422], [8738413, 8738582], [8739964, 8740000]]

Promoter

Chrom	Start	End	Description
chr16	8715536	8715572	CAGE_peak_1_at_METTL22_5end
chr16	8715574	8715586	CAGE_peak_2_at_METTL22_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr16	GH16I008569	8569601	8570200	0.66	[{'connected_gene': 'METTL22', 'score': 10.68}, {'connected_gene': 'GC16P008558', 'score': 0.39}, {'connected_gene': 'GC16M008570', 'score': 0.39}, {'connected_gene': 'TMEM114', 'score': 0.34}]
chr16	GH16I008565	8565398	8565863	0.52	[{'connected_gene': 'METTL22', 'score': 10.64}, {'connected_gene': 'GC16P008558', 'score': 0.44}, {'connected_gene': 'GC16M008570', 'score': 0.37}, {'connected_gene': 'TMEM114', 'score': 0.34}]
chr16	GH16I008547	8547815	8549013	0.31	[{'connected_gene': 'METTL22', 'score': 4.9}, {'connected_gene': 'GC16P008558', 'score': 0.39}, {'connected_gene': 'ENSG00000261066', 'score': 0.37}, {'connected_gene': 'TMEM114', 'score': 0.26}]
chr16	GH16I008570	8570630	8572131	0.99	[{'connected_gene': 'METTL22', 'score': 10.74}, {'connected_gene': 'GC16P008558', 'score': 0.39}, {'connected_gene': 'GC16M008570', 'score': 0.39}, {'connected_gene': 'TMEM114', 'score': 0.37}]
chr16	GH16I008567	8567600	8568201	1.2	[{'connected_gene': 'METTL22', 'score': 10.74}, {'connected_gene': 'GC16P008558', 'score': 0.44}, {'connected_gene': 'GC16M008570', 'score': 0.37}, {'connected_gene': 'TMEM114', 'score': 0.34}]
chr16	GH16I007766	7766739	7766888	0.2	[{'connected_gene': 'METTL22', 'score': 6.28}, {'connected_gene': 'ENSG00000252138', 'score': 0.28}, {'connected_gene': 'LOC105371069', 'score': 0.13}]
chr16	GH16I008644	8644001	8645800	0.89	[{'connected_gene': 'METTL22', 'score': 17.12}, {'connected_gene': 'GC16M008655', 'score': 0.39}]
chr16	GH16I008621	8621084	8623236	2.15	[{'connected_gene': 'METTL22', 'score': 574.16}, {'connected_gene': 'GC16M008655', 'score': 0.28}]
chr16	GH16I008645	8645884	8646033	0.4	[{'connected_gene': 'METTL22', 'score': 16.5}, {'connected_gene': 'GC16M008655', 'score': 0.39}]
chr16	GH16I008631	8631760	8633760	1.25	[{'connected_gene': 'C16orf72', 'score': 15.8}, {'connected_gene': 'METTL22', 'score': 15.49}, {'connected_gene': 'TMEM114', 'score': 11.24}, {'connected_gene': 'USP7', 'score': 3.35}, {'connected_gene': 'GC16M008655', 'score': 0.31}]
chr16	GH16I008536	8536799	8536948	0.31	[{'connected_gene': 'TMEM114', 'score': 10.82}, {'connected_gene': 'METTL22', 'score': 5.38}, {'connected_gene': 'ENSG00000261066', 'score': 0.77}, {'connected_gene': 'GC16P008558', 'score': 0.34}]
chr16	GH16I008594	8594404	8594553	0.89	[{'connected_gene': 'TMEM114', 'score': 0.77}, {'connected_gene': 'METTL22', 'score': 0.31}]
chr16	GH16I008635	8635464	8635613	0.9	[{'connected_gene': 'TMEM114', 'score': 11.04}, {'connected_gene': 'METTL22', 'score': 0.39}, {'connected_gene': 'GC16M008655', 'score': 0.34}]
chr16	GH16I008680	8680772	8681687	0.86	[{'connected_gene': 'ABAT', 'score': 23.63}, {'connected_gene': 'METTL22', 'score': 7.14}, {'connected_gene': 'RN7SL743P', 'score': 0.77}]
chr16	GH16I008677	8677161	8680763	0.99	[{'connected_gene': 'ABAT', 'score': 26.96}, {'connected_gene': 'METTL22', 'score': 12.56}, {'connected_gene': 'RN7SL743P', 'score': 0.77}]
chr16	GH16I008675	8675244	8675393	0.54	[{'connected_gene': 'ABAT', 'score': 550.77}, {'connected_gene': 'METTL22', 'score': 11.7}, {'connected_gene': 'RN7SL743P', 'score': 0.44}]
chr16	GH16I008673	8673801	8675201	1.88	[{'connected_gene': 'ABAT', 'score': 558.62}, {'connected_gene': 'METTL22', 'score': 14.62}, {'connected_gene': 'GC16P008670', 'score': 0.77}]
chr16	GH16I008655	8655264	8655373	0.75	[{'connected_gene': 'RNU7-63P', 'score': 11.02}, {'connected_gene': 'GC16M008655', 'score': 0.77}, {'connected_gene': 'METTL22', 'score': 0.29}]
chr16	GH16I008585	8585110	8585469	0.33	[{'connected_gene': 'GC16M008570', 'score': 550.77}, {'connected_gene': 'METTL22', 'score': 7.0}, {'connected_gene': 'TMEM114', 'score': 0.77}]
chr16	GH16I007764	7764264	7765808	0.38	[{'connected_gene': 'ENSG00000252138', 'score': 11.47}, {'connected_gene': 'METTL22', 'score': 5.34}, {'connected_gene': 'LOC105371069', 'score': 0.13}]
chr16	GH16I009089	9089804	9094913	2.29	[{'connected_gene': 'GC16P009091', 'score': 550.77}, {'connected_gene': 'C16orf72', 'score': 550.77}, {'connected_gene': 'PIR39735', 'score': 550.77}, {'connected_gene': 'USP7', 'score': 24.22}, {'connected_gene': 'METTL22', 'score': 23.75}, {'connected_gene': 'ENSG00000263244', 'score': 11.62}, {'connected_gene': 'CARHSP1', 'score': 7.54}, {'connected_gene': 'ENSG00000260349', 'score': 6.22}, {'connected_gene': 'GC16P009105', 'score': 0.39}]