PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000370033	[[103605355, 103607377], [103609532, 103609649], [103649168, 103649247], [103699619, 103699695], [103716353, 103716480], [103717406, 103717489], [103734968, 103735057], [103750307, 103750368], [103751725, 103751795], [103753294, 103753360], [103755053, 103755112], [103761727, 103761829], [103766296, 103766390], [103769130, 103769206], [103769733, 103769780], [103771479, 103771540], [103772589, 103772633], [103773724, 103773781], [103783233, 103783320], [103783431, 103783506], [103784912, 103785005], [103789394, 103789502], [103792782, 103792929], [103793039, 103793096], [103799769, 103799882], [103815841, 103815950]]	[[103607284, 103607377], [103609532, 103609649], [103649168, 103649247], [103699619, 103699695], [103716353, 103716480], [103717406, 103717489], [103734968, 103735057], [103750307, 103750368], [103751725, 103751795], [103753294, 103753360], [103755053, 103755112], [103761727, 103761829], [103766296, 103766390], [103769130, 103769206], [103769733, 103769780], [103771479, 103771540], [103772589, 103772633], [103773724, 103773781], [103783233, 103783320], [103783431, 103783506], [103784912, 103785005], [103789394, 103789502], [103792782, 103792929], [103793039, 103793096], [103799769, 103799871]]
ENST00000311122	[[103789204, 103789502], [103792782, 103792929], [103793039, 103793096], [103799769, 103799882], [103815841, 103815950]]	[[103789211, 103789502], [103792782, 103792929], [103793039, 103793096], [103799769, 103799871]]
ENST00000495001	[[103605355, 103607377], [103609532, 103609649], [103649168, 103649493]]	None
ENST00000456149	[[103750307, 103750368], [103751725, 103751795], [103755053, 103755112], [103761727, 103761821]]	[[103750307, 103750368], [103751725, 103751795], [103755053, 103755112], [103761727, 103761821]]
ENST00000470043	[[103789204, 103789502], [103792689, 103792929], [103793039, 103793195]]	None

Promoter

Chrom	Start	End	Description
chr10	103649352	103649390	CAGE_peak_5_at_C10orf76_5end
chr10	103815874	103815953	CAGE_peak_1_at_C10orf76_5end
chr10	103815994	103816012	CAGE_peak_2_at_C10orf76_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr10	GH10I102111	102111944	102123523	2.59	[{'connected_gene': 'LDB1', 'score': 573.75}, {'connected_gene': 'HPS6', 'score': 19.87}, {'connected_gene': 'PPRC1', 'score': 13.82}, {'connected_gene': 'NFKB2', 'score': 13.7}, {'connected_gene': 'NOLC1', 'score': 11.71}, {'connected_gene': 'BORCS7', 'score': 6.22}, {'connected_gene': 'C10orf95', 'score': 4.36}, {'connected_gene': 'KCNIP2-AS1', 'score': 4.19}, {'connected_gene': 'KCNIP2', 'score': 4.08}, {'connected_gene': 'PSD', 'score': 3.0}, {'connected_gene': 'MGEA5', 'score': 2.72}, {'connected_gene': 'FBXL15', 'score': 2.56}, {'connected_gene': 'C10orf76', 'score': 1.88}, {'connected_gene': 'SUFU', 'score': 1.68}, {'connected_gene': 'MFSD13A', 'score': 1.48}, {'connected_gene': 'LOC105378459', 'score': 0.77}, {'connected_gene': 'PIR53149', 'score': 0.44}]
chr10	GH10I102047	102047275	102047502	0.22	[{'connected_gene': 'BTRC', 'score': 4.49}, {'connected_gene': 'C10orf76', 'score': 0.44}, {'connected_gene': 'ENSG00000222430', 'score': 0.16}]
chr10	GH10I102641	102641374	102654052	2.57	[{'connected_gene': 'TRIM8', 'score': 558.94}, {'connected_gene': 'SFXN2', 'score': 36.78}, {'connected_gene': 'MFSD13A', 'score': 26.57}, {'connected_gene': 'RPEL1', 'score': 20.57}, {'connected_gene': 'PDCD11', 'score': 17.56}, {'connected_gene': 'AS3MT', 'score': 17.05}, {'connected_gene': 'PPRC1', 'score': 13.79}, {'connected_gene': 'TAF5', 'score': 13.74}, {'connected_gene': 'LDB1', 'score': 11.83}, {'connected_gene': 'ARL3', 'score': 11.44}, {'connected_gene': 'SUFU', 'score': 11.22}, {'connected_gene': 'GBF1', 'score': 11.11}, {'connected_gene': 'HPS6', 'score': 10.67}, {'connected_gene': 'NOLC1', 'score': 10.6}, {'connected_gene': 'C10orf76', 'score': 5.29}, {'connected_gene': 'NFKB2', 'score': 2.63}, {'connected_gene': 'WBP1L', 'score': 1.37}, {'connected_gene': 'ENSG00000272933', 'score': 0.77}, {'connected_gene': 'LOC105378460', 'score': 0.44}, {'connected_gene': 'GC10M102383', 'score': 0.25}, {'connected_gene': 'GC10M102382', 'score': 0.25}]
chr10	GH10I102511	102511335	102512713	0.8	[{'connected_gene': 'MFSD13A', 'score': 23.53}, {'connected_gene': 'RNU6-43P', 'score': 12.07}, {'connected_gene': 'C10orf95', 'score': 10.47}, {'connected_gene': 'C10orf76', 'score': 4.67}, {'connected_gene': 'GC10P102507', 'score': 0.77}, {'connected_gene': 'SUFU', 'score': 0.44}, {'connected_gene': 'GC10M102448', 'score': 0.39}, {'connected_gene': 'GC10M102383', 'score': 0.09}, {'connected_gene': 'GC10M102382', 'score': 0.09}]
chr10	GH10I102000	102000169	102004587	1.28	[{'connected_gene': 'HPS6', 'score': 40.59}, {'connected_gene': 'GBF1', 'score': 33.46}, {'connected_gene': 'PPRC1', 'score': 28.79}, {'connected_gene': 'KCNIP2-AS1', 'score': 20.63}, {'connected_gene': 'LDB1', 'score': 20.28}, {'connected_gene': 'ARL3', 'score': 14.53}, {'connected_gene': 'KCNIP2', 'score': 11.87}, {'connected_gene': 'C10orf76', 'score': 10.99}, {'connected_gene': 'MGEA5', 'score': 10.13}, {'connected_gene': 'SFXN2', 'score': 9.87}, {'connected_gene': 'NFKB2', 'score': 6.2}, {'connected_gene': 'WBP1L', 'score': 4.38}, {'connected_gene': 'ENSG00000222430', 'score': 0.25}]
chr10	GH10I101933	101933972	101934351	0.4	[{'connected_gene': 'HPS6', 'score': 15.78}, {'connected_gene': 'ENSG00000222430', 'score': 0.37}, {'connected_gene': 'ENSG00000274742', 'score': 0.34}, {'connected_gene': 'C10orf76', 'score': 0.13}]
chr10	GH10I101971	101971886	101974799	1.06	[{'connected_gene': 'HPS6', 'score': 20.76}, {'connected_gene': 'WBP1L', 'score': 3.83}, {'connected_gene': 'ENSG00000222430', 'score': 0.34}, {'connected_gene': 'C10orf76', 'score': 0.18}]
chr10	GH10I101890	101889744	101889933	0.63	[{'connected_gene': 'HPS6', 'score': 29.7}, {'connected_gene': 'KCNIP2', 'score': 12.01}, {'connected_gene': 'C10orf76', 'score': 10.8}, {'connected_gene': 'ENSG00000274742', 'score': 0.34}, {'connected_gene': 'GC10M101802', 'score': 0.26}, {'connected_gene': 'LOC101927445', 'score': 0.25}]
chr10	GH10I101985	101985423	101987344	1.17	[{'connected_gene': 'HPS6', 'score': 29.32}, {'connected_gene': 'KCNIP2', 'score': 11.22}, {'connected_gene': 'C10orf76', 'score': 10.98}, {'connected_gene': 'ENSG00000222430', 'score': 0.29}]
chr10	GH10I101937	101937121	101941585	1.41	[{'connected_gene': 'HPS6', 'score': 8.08}, {'connected_gene': 'KCNIP2', 'score': 6.3}, {'connected_gene': 'NFKB2', 'score': 5.85}, {'connected_gene': 'NPM3', 'score': 5.4}, {'connected_gene': 'WBP1L', 'score': 3.75}, {'connected_gene': 'ENSG00000222430', 'score': 0.39}, {'connected_gene': 'ENSG00000274742', 'score': 0.31}, {'connected_gene': 'C10orf76', 'score': 0.13}]
chr10	GH10I101966	101966557	101971610	1.12	[{'connected_gene': 'HPS6', 'score': 29.58}, {'connected_gene': 'KCNIP2', 'score': 17.4}, {'connected_gene': 'ARL3', 'score': 12.15}, {'connected_gene': 'C10orf76', 'score': 11.24}, {'connected_gene': 'NPM3', 'score': 5.73}, {'connected_gene': 'C10orf95', 'score': 4.97}, {'connected_gene': 'ENSG00000222430', 'score': 0.37}]
chr10	GH10I101979	101979065	101980727	0.31	[{'connected_gene': 'C10orf76', 'score': 11.24}, {'connected_gene': 'HPS6', 'score': 11.22}, {'connected_gene': 'WBP1L', 'score': 3.96}, {'connected_gene': 'ENSG00000222430', 'score': 0.31}]
chr10	GH10I102057	102057698	102058625	0.92	[{'connected_gene': 'C10orf76', 'score': 550.77}, {'connected_gene': 'HPS6', 'score': 19.03}]
chr10	GH10I102054	102054392	102056883	2.07	[{'connected_gene': 'C10orf76', 'score': 554.57}, {'connected_gene': 'KCNIP2', 'score': 4.94}, {'connected_gene': 'ENSG00000222430', 'score': 0.15}]
chr10	GH10I102051	102051503	102051562	0.61	[{'connected_gene': 'C10orf76', 'score': 550.77}, {'connected_gene': 'ENSG00000222430', 'score': 0.15}]
chr10	GH10I102055	102054064	102054213	0.49	[{'connected_gene': 'C10orf76', 'score': 0.77}, {'connected_gene': 'ENSG00000222430', 'score': 0.15}]
chr10	GH10I102052	102052402	102053000	0.31	[{'connected_gene': 'C10orf76', 'score': 0.77}, {'connected_gene': 'ENSG00000222430', 'score': 0.15}]
chr10	GH10I102431	102431457	102436937	2.35	[{'connected_gene': 'CUEDC2', 'score': 550.77}, {'connected_gene': 'HPS6', 'score': 25.1}, {'connected_gene': 'PPRC1', 'score': 23.01}, {'connected_gene': 'LDB1', 'score': 21.56}, {'connected_gene': 'PDCD11', 'score': 17.56}, {'connected_gene': 'TAF5', 'score': 13.74}, {'connected_gene': 'SUFU', 'score': 11.31}, {'connected_gene': 'GBF1', 'score': 11.15}, {'connected_gene': 'PCGF6', 'score': 10.86}, {'connected_gene': 'RPARP-AS1', 'score': 6.89}, {'connected_gene': 'PITX3', 'score': 5.98}, {'connected_gene': 'C10orf95', 'score': 4.76}, {'connected_gene': 'C10orf76', 'score': 4.6}, {'connected_gene': 'BORCS7', 'score': 4.57}, {'connected_gene': 'MIR146B', 'score': 0.77}, {'connected_gene': 'GC10P102438', 'score': 0.77}, {'connected_gene': 'GC10P102437', 'score': 0.77}, {'connected_gene': 'GC10M102383', 'score': 0.07}, {'connected_gene': 'GC10M102382', 'score': 0.07}]
chr10	GH10I101692	101692776	101695918	2.33	[{'connected_gene': 'FBXW4', 'score': 550.77}, {'connected_gene': 'PPRC1', 'score': 40.74}, {'connected_gene': 'GBF1', 'score': 32.68}, {'connected_gene': 'MRPL43', 'score': 30.36}, {'connected_gene': 'LDB1', 'score': 23.72}, {'connected_gene': 'ENSG00000272572', 'score': 22.8}, {'connected_gene': 'HPS6', 'score': 17.22}, {'connected_gene': 'TWNK', 'score': 10.82}, {'connected_gene': 'SUFU', 'score': 10.73}, {'connected_gene': 'LZTS2', 'score': 10.04}, {'connected_gene': 'C10orf76', 'score': 10.01}, {'connected_gene': 'PDZD7', 'score': 9.66}, {'connected_gene': 'BTRC', 'score': 5.64}, {'connected_gene': 'DPCD', 'score': 4.6}, {'connected_gene': 'MGEA5', 'score': 1.23}, {'connected_gene': 'RNU6-1165P', 'score': 0.19}]
chr10	GH10I102916	102916495	102920802	2.06	[{'connected_gene': 'CNNM2', 'score': 550.77}, {'connected_gene': 'AS3MT', 'score': 37.09}, {'connected_gene': 'PDCD11', 'score': 26.85}, {'connected_gene': 'GBF1', 'score': 18.59}, {'connected_gene': 'TAF5', 'score': 16.85}, {'connected_gene': 'PPRC1', 'score': 15.33}, {'connected_gene': 'C10orf76', 'score': 11.08}, {'connected_gene': 'ENSG00000260461', 'score': 10.21}, {'connected_gene': 'LDB1', 'score': 10.08}, {'connected_gene': 'MARCKSL1P1', 'score': 9.2}, {'connected_gene': 'WBP1L', 'score': 4.44}, {'connected_gene': 'GC10M102937', 'score': 0.37}]
chr10	GH10I101224	101224707	101231200	1.45	[{'connected_gene': 'LBX1-AS1', 'score': 558.42}, {'connected_gene': 'GC10M101227', 'score': 550.77}, {'connected_gene': 'LBX1', 'score': 550.77}, {'connected_gene': 'PHBP9', 'score': 27.38}, {'connected_gene': 'PPRC1', 'score': 26.96}, {'connected_gene': 'LDB1', 'score': 20.66}, {'connected_gene': 'CHUK', 'score': 20.06}, {'connected_gene': 'ENSG00000272572', 'score': 11.34}, {'connected_gene': 'C10orf76', 'score': 11.08}, {'connected_gene': 'SEC31B', 'score': 10.92}, {'connected_gene': 'MRPL43', 'score': 10.59}, {'connected_gene': 'HPS6', 'score': 9.88}, {'connected_gene': 'LZTS2', 'score': 9.84}, {'connected_gene': 'PDZD7', 'score': 9.72}, {'connected_gene': 'SFXN3', 'score': 4.16}]
chr10	GH10I101906	101906438	101907385	0.2	[{'connected_gene': 'KCNIP2', 'score': 10.63}, {'connected_gene': 'C10orf95', 'score': 3.98}, {'connected_gene': 'ENSG00000274742', 'score': 0.44}, {'connected_gene': 'GC10M101802', 'score': 0.22}, {'connected_gene': 'LOC101927445', 'score': 0.2}, {'connected_gene': 'C10orf76', 'score': 0.11}]
chr10	GH10I101960	101960278	101963301	1.07	[{'connected_gene': 'KCNIP2', 'score': 16.8}, {'connected_gene': 'HPS6', 'score': 16.63}, {'connected_gene': 'NPM3', 'score': 5.75}, {'connected_gene': 'ENSG00000222430', 'score': 0.44}, {'connected_gene': 'C10orf76', 'score': 0.16}]
chr10	GH10I101889	101889214	101889714	0.62	[{'connected_gene': 'KCNIP2', 'score': 12.01}, {'connected_gene': 'C10orf76', 'score': 10.8}, {'connected_gene': 'HPS6', 'score': 10.79}, {'connected_gene': 'ENSG00000274742', 'score': 0.34}, {'connected_gene': 'GC10M101802', 'score': 0.26}, {'connected_gene': 'LOC101927445', 'score': 0.25}]
chr10	GH10I101905	101905444	101905553	0.2	[{'connected_gene': 'KCNIP2', 'score': 10.99}, {'connected_gene': 'C10orf76', 'score': 10.89}, {'connected_gene': 'HPS6', 'score': 10.89}, {'connected_gene': 'ENSG00000274742', 'score': 0.44}, {'connected_gene': 'GC10M101802', 'score': 0.22}, {'connected_gene': 'LOC101927445', 'score': 0.2}]
chr10	GH10I101900	101900890	101904791	1.1	[{'connected_gene': 'KCNIP2', 'score': 11.05}, {'connected_gene': 'C10orf76', 'score': 10.89}, {'connected_gene': 'HPS6', 'score': 10.89}, {'connected_gene': 'ENSG00000274742', 'score': 0.39}, {'connected_gene': 'GC10M101802', 'score': 0.23}, {'connected_gene': 'LOC101927445', 'score': 0.21}]
chr10	GH10I101888	101888799	101889135	0.6	[{'connected_gene': 'KCNIP2', 'score': 12.01}, {'connected_gene': 'C10orf76', 'score': 10.8}, {'connected_gene': 'HPS6', 'score': 10.79}, {'connected_gene': 'ENSG00000274742', 'score': 0.34}, {'connected_gene': 'GC10M101802', 'score': 0.26}, {'connected_gene': 'LOC101927445', 'score': 0.25}]
chr10	GH10I101893	101893909	101895125	0.62	[{'connected_gene': 'KCNIP2', 'score': 12.0}, {'connected_gene': 'C10orf76', 'score': 10.79}, {'connected_gene': 'HPS6', 'score': 10.79}, {'connected_gene': 'ENSG00000274742', 'score': 0.37}, {'connected_gene': 'GC10M101802', 'score': 0.25}, {'connected_gene': 'LOC101927445', 'score': 0.23}]
chr10	GH10I102007	102007703	102008402	0.2	[{'connected_gene': 'KCNIP2', 'score': 12.2}, {'connected_gene': 'C10orf76', 'score': 11.58}, {'connected_gene': 'HPS6', 'score': 11.56}, {'connected_gene': 'KCNIP2-AS1', 'score': 10.47}, {'connected_gene': 'MGEA5', 'score': 10.47}, {'connected_gene': 'FGF8', 'score': 9.35}, {'connected_gene': 'POLL', 'score': 8.96}, {'connected_gene': 'DPCD', 'score': 8.96}, {'connected_gene': 'ENSG00000222430', 'score': 0.22}]
chr10	GH10I102009	102009800	102010201	1.24	[{'connected_gene': 'KCNIP2', 'score': 12.2}, {'connected_gene': 'C10orf76', 'score': 11.58}, {'connected_gene': 'HPS6', 'score': 11.56}, {'connected_gene': 'KCNIP2-AS1', 'score': 10.47}, {'connected_gene': 'MGEA5', 'score': 10.47}, {'connected_gene': 'FGF8', 'score': 9.35}, {'connected_gene': 'POLL', 'score': 8.96}, {'connected_gene': 'DPCD', 'score': 8.96}, {'connected_gene': 'ENSG00000222430', 'score': 0.22}]
chr10	GH10I101958	101958034	101958255	0.44	[{'connected_gene': 'KCNIP2', 'score': 17.08}, {'connected_gene': 'C10orf76', 'score': 1.46}, {'connected_gene': 'ENSG00000222430', 'score': 0.44}]
chr10	GH10I101995	101995701	101996187	0.86	[{'connected_gene': 'KCNIP2', 'score': 16.63}, {'connected_gene': 'ENSG00000222430', 'score': 0.26}, {'connected_gene': 'C10orf76', 'score': 0.21}]
chr10	GH10I101878	101878924	101880884	0.64	[{'connected_gene': 'KCNIP2', 'score': 11.32}, {'connected_gene': 'ENSG00000274742', 'score': 0.29}, {'connected_gene': 'GC10M101802', 'score': 0.29}, {'connected_gene': 'LOC101927445', 'score': 0.28}, {'connected_gene': 'C10orf76', 'score': 0.1}]
chr10	GH10I101828	101828804	101833162	1.99	[{'connected_gene': 'PPRC1', 'score': 112.1}, {'connected_gene': 'LDB1', 'score': 91.92}, {'connected_gene': 'GBF1', 'score': 71.2}, {'connected_gene': 'LZTS2', 'score': 64.11}, {'connected_gene': 'MRPL43', 'score': 56.79}, {'connected_gene': 'HPS6', 'score': 53.36}, {'connected_gene': 'NOLC1', 'score': 28.51}, {'connected_gene': 'SUFU', 'score': 24.39}, {'connected_gene': 'ENSG00000272572', 'score': 22.79}, {'connected_gene': 'KCNIP2-AS1', 'score': 16.81}, {'connected_gene': 'SFXN2', 'score': 13.66}, {'connected_gene': 'C10orf76', 'score': 11.15}, {'connected_gene': 'KCNIP2', 'score': 10.87}, {'connected_gene': 'SLF2', 'score': 10.29}, {'connected_gene': 'ARL3', 'score': 10.1}, {'connected_gene': 'TWNK', 'score': 10.04}, {'connected_gene': 'NFKB2', 'score': 9.69}, {'connected_gene': 'PDZD7', 'score': 9.66}, {'connected_gene': 'NPM3', 'score': 6.42}, {'connected_gene': 'RPARP-AS1', 'score': 3.8}, {'connected_gene': 'BTRC', 'score': 1.76}, {'connected_gene': 'LOC101927445', 'score': 0.44}, {'connected_gene': 'GC10M101802', 'score': 0.37}]
chr10	GH10I101947	101947924	101951045	0.76	[{'connected_gene': 'PPRC1', 'score': 51.04}, {'connected_gene': 'MRPL43', 'score': 49.15}, {'connected_gene': 'GBF1', 'score': 45.47}, {'connected_gene': 'LDB1', 'score': 35.76}, {'connected_gene': 'ARL3', 'score': 24.86}, {'connected_gene': 'TWNK', 'score': 18.83}, {'connected_gene': 'LZTS2', 'score': 14.66}, {'connected_gene': 'HPS6', 'score': 11.56}, {'connected_gene': 'KCNIP2-AS1', 'score': 10.61}, {'connected_gene': 'SFXN2', 'score': 9.87}, {'connected_gene': 'KCNIP2', 'score': 6.29}, {'connected_gene': 'WBP1L', 'score': 3.82}, {'connected_gene': 'ENSG00000222430', 'score': 0.77}, {'connected_gene': 'ENSG00000274742', 'score': 0.28}, {'connected_gene': 'C10orf76', 'score': 0.14}]
chr10	GH10I101858	101858366	101860237	0.46	[{'connected_gene': 'FGF8', 'score': 10.4}, {'connected_gene': 'PPRC1', 'score': 10.32}, {'connected_gene': 'GC10M101802', 'score': 0.39}, {'connected_gene': 'LOC101927445', 'score': 0.37}, {'connected_gene': 'ENSG00000274742', 'score': 0.23}, {'connected_gene': 'C10orf76', 'score': 0.08}]
chr10	GH10I102290	102290898	102292011	0.58	[{'connected_gene': 'GC10P102289', 'score': 550.77}, {'connected_gene': 'GBF1', 'score': 11.1}, {'connected_gene': 'PITX3', 'score': 11.1}, {'connected_gene': 'ELOVL3', 'score': 10.69}, {'connected_gene': 'C10orf76', 'score': 7.45}, {'connected_gene': 'PSD', 'score': 5.43}, {'connected_gene': 'HPS6', 'score': 4.26}, {'connected_gene': 'NFKB2', 'score': 0.15}]
chr10	GH10I101848	101848002	101849599	0.74	[{'connected_gene': 'PIR36625', 'score': 550.77}, {'connected_gene': 'GC10M101802', 'score': 550.77}, {'connected_gene': 'GC10P101847', 'score': 550.77}, {'connected_gene': 'HPS6', 'score': 18.44}, {'connected_gene': 'ENSG00000272933', 'score': 4.34}, {'connected_gene': 'LOC101927445', 'score': 0.44}, {'connected_gene': 'ENSG00000274742', 'score': 0.21}, {'connected_gene': 'C10orf76', 'score': 0.08}]
chr10	GH10I101951	101951457	101953421	0.31	[{'connected_gene': 'ENSG00000222430', 'score': 550.77}, {'connected_gene': 'KCNIP2', 'score': 11.04}, {'connected_gene': 'HPS6', 'score': 8.44}, {'connected_gene': 'ENSG00000274742', 'score': 0.28}, {'connected_gene': 'C10orf76', 'score': 0.15}]