PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000264198	[[20825942, 20827912], [20828561, 20828682], [20829714, 20829802], [20834397, 20834654]]	[[20827182, 20827912], [20828561, 20828682], [20829714, 20829802], [20834397, 20834517]]
NM_024544	[[20825940, 20827912], [20828561, 20828682], [20829714, 20829802], [20834397, 20834674]]	[[20827182, 20827912], [20828561, 20828682], [20829714, 20829802], [20834397, 20834517]]

Promoter

Chrom	Start	End	Description
chr1	20834552	20834572	CAGE_peak_2_at_MUL1_5end
chr1	20834586	20834656	CAGE_peak_1_at_MUL1_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr1	GH01I020587	20587400	20588001	1.16	[{'connected_gene': 'CDA', 'score': 555.09}, {'connected_gene': 'MUL1', 'score': 4.89}, {'connected_gene': 'FAM43B', 'score': 0.28}]
chr1	GH01I020588	20588261	20591800	1.75	[{'connected_gene': 'CDA', 'score': 577.98}, {'connected_gene': 'PINK1', 'score': 17.89}, {'connected_gene': 'FAM43B', 'score': 11.22}, {'connected_gene': 'MUL1', 'score': 9.99}, {'connected_gene': 'GC01P020619', 'score': 0.31}]
chr1	GH01I020507	20507049	20508876	2.05	[{'connected_gene': 'MUL1', 'score': 596.79}, {'connected_gene': 'NBPF3', 'score': 11.34}, {'connected_gene': 'HP1BP3', 'score': 9.71}, {'connected_gene': 'FAM43B', 'score': 7.4}, {'connected_gene': 'GC01M020501', 'score': 0.44}, {'connected_gene': 'PIR53014', 'score': 0.44}]
chr1	GH01I020464	20464729	20466480	0.43	[{'connected_gene': 'MUL1', 'score': 40.38}, {'connected_gene': 'CAMK2N1', 'score': 11.68}, {'connected_gene': 'FAM43B', 'score': 9.91}, {'connected_gene': 'ENSG00000284641', 'score': 0.39}, {'connected_gene': 'LINC01141', 'score': 0.29}]
chr1	GH01I020461	20461141	20463799	0.52	[{'connected_gene': 'MUL1', 'score': 29.88}, {'connected_gene': 'CAMK2N1', 'score': 11.55}, {'connected_gene': 'VWA5B1', 'score': 10.5}, {'connected_gene': 'ENSG00000284641', 'score': 0.39}, {'connected_gene': 'LINC01141', 'score': 0.29}]
chr1	GH01I020469	20469622	20471324	0.67	[{'connected_gene': 'MUL1', 'score': 19.64}, {'connected_gene': 'HP1BP3', 'score': 13.54}, {'connected_gene': 'ENSG00000226664', 'score': 9.92}, {'connected_gene': 'NBPF3', 'score': 9.75}, {'connected_gene': 'FAM43B', 'score': 9.71}, {'connected_gene': 'ENSG00000284641', 'score': 0.44}, {'connected_gene': 'LINC01141', 'score': 0.28}]
chr1	GH01I020447	20447071	20447527	0.38	[{'connected_gene': 'MUL1', 'score': 25.99}, {'connected_gene': 'LINC01141', 'score': 0.37}, {'connected_gene': 'ENSG00000284641', 'score': 0.31}]
chr1	GH01I020472	20472748	20473854	1.09	[{'connected_gene': 'MUL1', 'score': 11.44}, {'connected_gene': 'ENSG00000226664', 'score': 9.91}, {'connected_gene': 'ENSG00000284641', 'score': 0.77}, {'connected_gene': 'LINC01141', 'score': 0.26}]
chr1	GH01I020420	20420479	20422984	0.2	[{'connected_gene': 'MUL1', 'score': 10.52}, {'connected_gene': 'LINC01141', 'score': 0.44}, {'connected_gene': 'ENSG00000226487', 'score': 0.44}]
chr1	GH01I020488	20488130	20489239	0.31	[{'connected_gene': 'MUL1', 'score': 10.08}, {'connected_gene': 'FAM43B', 'score': 6.97}, {'connected_gene': 'CAMK2N1', 'score': 0.77}, {'connected_gene': 'GC01M020501', 'score': 0.39}, {'connected_gene': 'PIR53014', 'score': 0.39}]
chr1	GH01I020575	20575348	20575517	1.13	[{'connected_gene': 'PINK1', 'score': 12.29}, {'connected_gene': 'CDA', 'score': 11.8}, {'connected_gene': 'MUL1', 'score': 10.73}, {'connected_gene': 'FAM43B', 'score': 0.34}]
chr1	GH01I020576	20576448	20576597	0.31	[{'connected_gene': 'PINK1', 'score': 12.29}, {'connected_gene': 'MUL1', 'score': 10.73}, {'connected_gene': 'CDA', 'score': 0.39}, {'connected_gene': 'FAM43B', 'score': 0.34}]
chr1	GH01I020678	20678601	20679200	0.69	[{'connected_gene': 'PINK1', 'score': 11.41}, {'connected_gene': 'SH2D5', 'score': 11.12}, {'connected_gene': 'ENSG00000233069', 'score': 11.12}, {'connected_gene': 'CDA', 'score': 9.63}, {'connected_gene': 'MUL1', 'score': 6.22}, {'connected_gene': 'DDOST', 'score': 0.37}, {'connected_gene': 'ENSG00000235432', 'score': 0.37}, {'connected_gene': 'KIF17', 'score': 0.28}]
chr1	GH01I020109	20109772	20111517	0.73	[{'connected_gene': 'PLA2G2F', 'score': 12.08}, {'connected_gene': 'PLA2G2C', 'score': 10.81}, {'connected_gene': 'MUL1', 'score': 9.7}, {'connected_gene': 'UBXN10', 'score': 5.18}, {'connected_gene': 'NBL1', 'score': 2.88}, {'connected_gene': 'PLA2G2D', 'score': 0.44}, {'connected_gene': 'LOC100419911', 'score': 0.19}]
chr1	GH01I020440	20440473	20442803	0.78	[{'connected_gene': 'CAMK2N1', 'score': 15.7}, {'connected_gene': 'MUL1', 'score': 10.76}, {'connected_gene': 'ENSG00000226664', 'score': 9.86}, {'connected_gene': 'LINC01141', 'score': 0.39}, {'connected_gene': 'ENSG00000284641', 'score': 0.29}]
chr1	GH01I020442	20442968	20443117	0.58	[{'connected_gene': 'CAMK2N1', 'score': 11.16}, {'connected_gene': 'MUL1', 'score': 10.79}, {'connected_gene': 'FAM43B', 'score': 10.75}, {'connected_gene': 'ENSG00000226664', 'score': 10.73}, {'connected_gene': 'LINC01141', 'score': 0.39}, {'connected_gene': 'ENSG00000284641', 'score': 0.29}]
chr1	GH01I020474	20474162	20488000	2.76	[{'connected_gene': 'CAMK2N1', 'score': 558.12}, {'connected_gene': 'ENSG00000284743', 'score': 550.77}, {'connected_gene': 'HP1BP3', 'score': 43.66}, {'connected_gene': 'DDOST', 'score': 30.09}, {'connected_gene': 'OTUD3', 'score': 20.66}, {'connected_gene': 'MUL1', 'score': 19.41}, {'connected_gene': 'FAM43B', 'score': 16.74}, {'connected_gene': 'NBPF2P', 'score': 9.72}, {'connected_gene': 'ENSG00000284641', 'score': 0.77}]
chr1	GH01I019642	19642768	19654515	2.4	[{'connected_gene': 'NBL1', 'score': 559.67}, {'connected_gene': 'UBR4', 'score': 18.47}, {'connected_gene': 'HTR6', 'score': 11.22}, {'connected_gene': 'MUL1', 'score': 10.78}, {'connected_gene': 'GC01M019654', 'score': 0.44}, {'connected_gene': 'MINOS1-NBL1', 'score': 0.23}]
chr1	GH01I020428	20428299	20431350	0.75	[{'connected_gene': 'LINC01141', 'score': 550.77}, {'connected_gene': 'MUL1', 'score': 10.84}, {'connected_gene': 'ENSG00000226664', 'score': 10.31}, {'connected_gene': 'VWA5B1', 'score': 10.25}, {'connected_gene': 'PINK1', 'score': 4.72}, {'connected_gene': 'ENSG00000226487', 'score': 0.37}]
chr1	GH01I020493	20493408	20498202	1.33	[{'connected_gene': 'OTUD3', 'score': 12.92}, {'connected_gene': 'NBPF3', 'score': 10.83}, {'connected_gene': 'NBPF2P', 'score': 10.81}, {'connected_gene': 'FAM43B', 'score': 8.1}, {'connected_gene': 'MUL1', 'score': 7.08}, {'connected_gene': 'PIR53014', 'score': 0.77}, {'connected_gene': 'GC01M020501', 'score': 0.77}, {'connected_gene': 'CAMK2N1', 'score': 0.44}]
chr1	GH01I019903	19903279	19904693	0.49	[{'connected_gene': 'OTUD3', 'score': 22.03}, {'connected_gene': 'MUL1', 'score': 9.57}, {'connected_gene': 'PIR55587', 'score': 0.44}, {'connected_gene': 'LOC105376823', 'score': 0.39}]
chr1	GH01I021331	21331602	21346770	2.9	[{'connected_gene': 'ECE1', 'score': 584.18}, {'connected_gene': 'HP1BP3', 'score': 100.88}, {'connected_gene': 'NBPF3', 'score': 64.56}, {'connected_gene': 'USP48', 'score': 59.01}, {'connected_gene': 'NBPF2P', 'score': 51.3}, {'connected_gene': 'CDC42-IT1', 'score': 20.29}, {'connected_gene': 'LDLRAD2', 'score': 11.49}, {'connected_gene': 'ENSG00000236936', 'score': 11.44}, {'connected_gene': 'HSPG2', 'score': 10.89}, {'connected_gene': 'MUL1', 'score': 10.78}, {'connected_gene': 'ENSG00000271428', 'score': 10.65}, {'connected_gene': 'DDOST', 'score': 10.26}, {'connected_gene': 'ALPL', 'score': 6.03}, {'connected_gene': 'EIF4G3', 'score': 4.9}, {'connected_gene': 'LOC100506801', 'score': 0.25}]
chr1	GH01I020551	20551307	20554864	1.55	[{'connected_gene': 'FAM43B', 'score': 560.08}, {'connected_gene': 'GC01P020552', 'score': 550.77}, {'connected_gene': 'PIR52351', 'score': 550.77}, {'connected_gene': 'MUL1', 'score': 7.01}, {'connected_gene': 'CDA', 'score': 0.28}]
chr1	GH01I020380	20380228	20381389	0.54	[{'connected_gene': 'VWA5B1', 'score': 10.51}, {'connected_gene': 'MUL1', 'score': 10.33}, {'connected_gene': 'PIR44198', 'score': 0.34}, {'connected_gene': 'GC01P020350', 'score': 0.29}, {'connected_gene': 'LINC01141', 'score': 0.23}]
chr1	GH01I020210	20210448	20213539	1.23	[{'connected_gene': 'LOC105376826', 'score': 550.77}, {'connected_gene': 'CAMK2N1', 'score': 20.67}, {'connected_gene': 'MUL1', 'score': 10.85}, {'connected_gene': 'VWA5B1', 'score': 10.69}, {'connected_gene': 'ENSG00000226664', 'score': 10.41}, {'connected_gene': 'UBXN10', 'score': 10.16}, {'connected_gene': 'LOC105376825', 'score': 0.39}]
chr1	GH01I020522	20522428	20522577	0.8	[{'connected_gene': 'GC01P020523', 'score': 550.77}, {'connected_gene': 'MUL1', 'score': 33.69}]
chr1	GH01I020399	20399446	20401089	0.59	[{'connected_gene': 'ENSG00000226664', 'score': 11.08}, {'connected_gene': 'VWA5B1', 'score': 10.4}, {'connected_gene': 'MUL1', 'score': 9.88}, {'connected_gene': 'CAMK2N1', 'score': 4.94}, {'connected_gene': 'PIR44198', 'score': 0.44}, {'connected_gene': 'LINC01141', 'score': 0.29}, {'connected_gene': 'GC01P020350', 'score': 0.25}]
chr1	GH01I020343	20343037	20344428	0.82	[{'connected_gene': 'ENSG00000226664', 'score': 11.56}, {'connected_gene': 'VWA5B1', 'score': 10.63}, {'connected_gene': 'CAMK2N1', 'score': 9.96}, {'connected_gene': 'MUL1', 'score': 9.79}, {'connected_gene': 'GC01P020350', 'score': 0.44}]