PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000341893	[[101442768, 101443563], [101445437, 101445580], [101446226, 101446385], [101447679, 101447781], [101450683, 101450797], [101451331, 101451498], [101474273, 101474438], [101475906, 101476040], [101476477, 101477267], [101481328, 101481404], [101483690, 101489406]]	[[101443520, 101443563], [101445437, 101445580], [101446226, 101446385], [101447679, 101447781], [101450683, 101450797], [101451331, 101451498], [101474273, 101474438], [101475906, 101476040], [101476477, 101477267], [101481328, 101481404], [101483690, 101484395]]
ENST00000489172	[[101443436, 101443563], [101445437, 101445580], [101446226, 101446385], [101450683, 101450797], [101451331, 101451498], [101474273, 101474438], [101475906, 101476040], [101476477, 101478356]]	None
ENST00000327230	[[101443486, 101443563], [101445437, 101445580], [101446226, 101446385], [101447679, 101447781], [101450683, 101450797], [101451331, 101451498], [101474273, 101474438], [101475906, 101476040], [101476477, 101477267], [101481328, 101481404], [101481952, 101482030], [101483690, 101489405]]	[[101443520, 101443563], [101445437, 101445580], [101446226, 101446385], [101447679, 101447781], [101450683, 101450797], [101451331, 101451498], [101474273, 101474438], [101475906, 101476040], [101476477, 101477267], [101481328, 101481404], [101481952, 101482030], [101483690, 101484395]]
ENST00000494050	[[101443498, 101443563], [101445437, 101445580], [101446226, 101446385], [101447679, 101447781], [101450683, 101450797], [101451331, 101451498], [101474273, 101474438], [101475906, 101476040], [101476654, 101477267], [101481328, 101481404], [101483690, 101484822]]	[[101443520, 101443563], [101445437, 101445580], [101446226, 101446385], [101447679, 101447781], [101450683, 101450797], [101451331, 101451498], [101474273, 101474438], [101475906, 101476040], [101476654, 101477267], [101481328, 101481404], [101483690, 101484395]]
ENST00000465011	[[101443501, 101443563], [101445437, 101445580], [101446226, 101446385], [101447657, 101447781], [101450683, 101450797], [101451331, 101451498]]	[[101443520, 101443563], [101445437, 101445580], [101446226, 101446385], [101447657, 101447699]]
ENST00000467655	[[101446313, 101446385], [101450683, 101450797], [101451331, 101451498], [101474273, 101474438], [101475916, 101476040], [101476477, 101477267], [101481328, 101481404], [101481952, 101482030], [101483690, 101483886]]	[[101446313, 101446385], [101450683, 101450797], [101451331, 101451498], [101474273, 101474438], [101475916, 101475926]]
ENST00000462076	[[101451454, 101451498], [101474273, 101474322]]	None
NM_001303401	[[101443436, 101443563], [101445437, 101445580], [101446226, 101446385], [101447679, 101447781], [101450683, 101450797], [101451331, 101451498], [101474273, 101474438], [101475906, 101476040], [101476654, 101477267], [101481328, 101481404], [101483690, 101489406]]	[[101443520, 101443563], [101445437, 101445580], [101446226, 101446385], [101447679, 101447781], [101450683, 101450797], [101451331, 101451498], [101474273, 101474438], [101475906, 101476040], [101476654, 101477267], [101481328, 101481404], [101483690, 101484395]]
NM_024548	[[101443436, 101443563], [101445437, 101445580], [101446226, 101446385], [101447679, 101447781], [101450683, 101450797], [101451331, 101451498], [101474273, 101474438], [101475906, 101476040], [101476477, 101477267], [101481328, 101481404], [101483690, 101489406]]	[[101443520, 101443563], [101445437, 101445580], [101446226, 101446385], [101447679, 101447781], [101450683, 101450797], [101451331, 101451498], [101474273, 101474438], [101475906, 101476040], [101476477, 101477267], [101481328, 101481404], [101483690, 101484395]]

Promoter

Chrom	Start	End	Description
chr3	101443431	101443440	CAGE_peak_3_at_CEP97_5end
chr3	101443446	101443471	CAGE_peak_1_at_CEP97_5end
chr3	101443476	101443515	CAGE_peak_2_at_CEP97_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr3	GH03I101778	101778309	101781742	2.17	[{'connected_gene': 'NXPE3', 'score': 577.24}, {'connected_gene': 'CEP97', 'score': 11.22}, {'connected_gene': 'RPL24', 'score': 10.89}, {'connected_gene': 'SENP7', 'score': 5.53}, {'connected_gene': 'ENSG00000249474', 'score': 0.26}]
chr3	GH03I101767	101767337	101770404	0.31	[{'connected_gene': 'NXPE3', 'score': 19.91}, {'connected_gene': 'CEP97', 'score': 11.93}, {'connected_gene': 'RPL24', 'score': 10.99}, {'connected_gene': 'ABI3BP', 'score': 4.33}]
chr3	GH03I101800	101800871	101802192	0.46	[{'connected_gene': 'NXPE3', 'score': 11.96}, {'connected_gene': 'CEP97', 'score': 10.87}, {'connected_gene': 'RPL24', 'score': 10.86}, {'connected_gene': 'ENSG00000249474', 'score': 0.34}]
chr3	GH03I101793	101793883	101795110	0.2	[{'connected_gene': 'NXPE3', 'score': 19.03}, {'connected_gene': 'CEP97', 'score': 10.88}, {'connected_gene': 'RPL24', 'score': 10.87}, {'connected_gene': 'ENSG00000249474', 'score': 0.29}]
chr3	GH03I101327	101327242	101327421	0.26	[{'connected_gene': 'CEP97', 'score': 2.52}, {'connected_gene': 'SENP7', 'score': 1.84}, {'connected_gene': 'ZBTB11', 'score': 1.25}, {'connected_gene': 'GC03M101320', 'score': 0.44}, {'connected_gene': 'GC03M101322', 'score': 0.44}, {'connected_gene': 'ZNF90P1', 'score': 0.31}]
chr3	GH03I101795	101795601	101796636	0.2	[{'connected_gene': 'CEP97', 'score': 10.88}, {'connected_gene': 'RPL24', 'score': 10.87}, {'connected_gene': 'NXPE3', 'score': 0.37}, {'connected_gene': 'ENSG00000249474', 'score': 0.31}]
chr3	GH03I101141	101141657	101142249	0.74	[{'connected_gene': 'CEP97', 'score': 4.15}, {'connected_gene': 'ACTR3P3', 'score': 0.34}, {'connected_gene': 'GC03P101086', 'score': 0.22}]
chr3	GH03I101723	101723801	101726786	2.48	[{'connected_gene': 'CEP97', 'score': 554.72}, {'connected_gene': 'ZBTB11-AS1', 'score': 21.57}, {'connected_gene': 'NXPE3', 'score': 19.45}, {'connected_gene': 'ZNF90P1', 'score': 10.3}]
chr3	GH03I101674	101674894	101678546	2.07	[{'connected_gene': 'ZBTB11', 'score': 571.62}, {'connected_gene': 'ZBTB11-AS1', 'score': 556.05}, {'connected_gene': 'NXPE3', 'score': 18.06}, {'connected_gene': 'SENP7', 'score': 17.91}, {'connected_gene': 'CEP97', 'score': 14.78}]
chr3	GH03I101169	101169705	101171125	0.56	[{'connected_gene': 'RNU6-865P', 'score': 9.78}, {'connected_gene': 'CEP97', 'score': 7.23}, {'connected_gene': 'ACTR3P3', 'score': 0.44}, {'connected_gene': 'GC03P101264', 'score': 0.16}]
chr3	GH03I101720	101720639	101723000	0.99	[{'connected_gene': 'GC03P101720', 'score': 550.77}, {'connected_gene': 'GC03P101721', 'score': 550.77}, {'connected_gene': 'NXPE3', 'score': 29.62}, {'connected_gene': 'ZBTB11', 'score': 22.35}, {'connected_gene': 'ZBTB11-AS1', 'score': 15.44}, {'connected_gene': 'RPL24', 'score': 11.62}, {'connected_gene': 'CEP97', 'score': 0.77}]