PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000486207	[[14988213, 14988647], [14989219, 14989400], [14991480, 14991621], [14992652, 14992747]]	[[14989240, 14989400], [14991480, 14991621], [14992652, 14992738]]
ENST00000361010	[[14988214, 14988647], [14989219, 14989400], [14991480, 14991621], [14992652, 14992747], [14993766, 14993832]]	[[14989240, 14989400], [14991480, 14991621], [14992652, 14992738]]
ENST00000494746	[[14988216, 14988647], [14989219, 14990543], [14991480, 14991562]]	None
ENST00000469608	[[14988585, 14988647], [14989219, 14989400], [14990371, 14990543], [14991480, 14991621], [14992652, 14992747], [14993790, 14993818]]	[[14989373, 14989400], [14990371, 14990543], [14991480, 14991621], [14992652, 14992738]]
ENST00000359642	[[14989373, 14989400], [14990371, 14990543], [14991480, 14991621], [14992652, 14992747], [14993790, 14993832]]	[[14989373, 14989400], [14990371, 14990543], [14991480, 14991621], [14992652, 14992738]]
ENST00000331587	[[14990046, 14990543], [14991480, 14991621], [14992652, 14992747], [14993790, 14993900]]	[[14990344, 14990543], [14991480, 14991621], [14992652, 14992738]]
ENST00000396372	[[14990251, 14990543], [14991480, 14991621], [14992652, 14992747], [14993766, 14993819]]	[[14990344, 14990543], [14991480, 14991621], [14992652, 14992738]]
NM_001033953	[[14988214, 14988647], [14989219, 14989400], [14991480, 14991621], [14992652, 14992747], [14993766, 14993832]]	[[14989240, 14989400], [14991480, 14991621], [14992652, 14992738]]
NR_125898	[[14988214, 14988647], [14989219, 14989400], [14990371, 14990543], [14991480, 14991621], [14992652, 14992747], [14993790, 14993832]]	None
NM_001033952	[[14990046, 14990543], [14991480, 14991621], [14992652, 14992747], [14993766, 14993832]]	[[14990344, 14990543], [14991480, 14991621], [14992652, 14992738]]
NM_001741	[[14990046, 14990543], [14991480, 14991621], [14992652, 14992747], [14993790, 14993832]]	[[14990344, 14990543], [14991480, 14991621], [14992652, 14992738]]

Promoter

Chrom	Start	End	Description
chr11	14992712	14992724	CAGE_peak_2_at_CALCA_5end
chr11	14993888	14993903	CAGE_peak_1_at_CALCA_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr11	GH11I014980	14980516	14981624	0.49	[{'connected_gene': 'OR7E41P', 'score': 0.44}, {'connected_gene': 'CALCA', 'score': 0.44}, {'connected_gene': 'CALCB', 'score': 0.18}]
chr11	GH11I015075	15073544	15073603	1.01	[{'connected_gene': 'CALCB', 'score': 550.1}, {'connected_gene': 'CALCA', 'score': 11.1}, {'connected_gene': 'INSC', 'score': 10.28}, {'connected_gene': 'GC11P015078', 'score': 0.77}, {'connected_gene': 'GC11P015027', 'score': 0.25}]
chr11	GH11I014975	14974415	14974524	0.46	[{'connected_gene': 'CALCA', 'score': 0.77}, {'connected_gene': 'OR7E41P', 'score': 0.39}, {'connected_gene': 'CALCB', 'score': 0.2}]
chr11	GH11I014972	14972341	14972400	0.73	[{'connected_gene': 'CALCA', 'score': 550.77}, {'connected_gene': 'OR7E41P', 'score': 0.37}, {'connected_gene': 'CALCB', 'score': 0.2}]
chr11	GH11I014976	14974855	14975004	0.59	[{'connected_gene': 'CALCA', 'score': 0.77}, {'connected_gene': 'OR7E41P', 'score': 0.39}, {'connected_gene': 'CALCB', 'score': 0.2}]
chr11	GH11I014974	14974635	14974744	0.49	[{'connected_gene': 'CALCA', 'score': 0.77}, {'connected_gene': 'OR7E41P', 'score': 0.39}, {'connected_gene': 'CALCB', 'score': 0.2}]
chr11	GH11I015073	15073801	15074000	0.65	[{'connected_gene': 'CALCA', 'score': 11.1}, {'connected_gene': 'INSC', 'score': 10.28}, {'connected_gene': 'GC11P015078', 'score': 0.77}, {'connected_gene': 'GC11P015027', 'score': 0.25}, {'connected_gene': 'CALCB', 'score': 0.1}]
chr11	GH11I015074	15074235	15075399	1.1	[{'connected_gene': 'COPB1', 'score': 18.63}, {'connected_gene': 'CYP2R1', 'score': 11.76}, {'connected_gene': 'CALCA', 'score': 11.1}, {'connected_gene': 'INSC', 'score': 10.28}, {'connected_gene': 'GC11P015078', 'score': 0.77}, {'connected_gene': 'GC11P015027', 'score': 0.25}, {'connected_gene': 'CALCB', 'score': 0.1}]