PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000367294	[[151773421, 151773721], [151775682, 151775788], [151779462, 151779707], [151785587, 151785753], [151789477, 151791236]]	[[151773680, 151773721], [151775682, 151775788], [151779462, 151779707], [151785587, 151785753], [151789477, 151790245]]
ENST00000545879	[[151773605, 151773721], [151779462, 151779707], [151785587, 151785753], [151789477, 151790389]]	[[151779672, 151779707], [151785587, 151785753], [151789477, 151790245]]
ENST00000494826	[[151773620, 151773721], [151779462, 151779707], [151785587, 151785753], [151789477, 151789677]]	[[151773680, 151773721], [151779462, 151779592]]
ENST00000483931	[[151773658, 151773935], [151775682, 151775788], [151779462, 151779707], [151785587, 151785701]]	None
NM_001286562	[[151773392, 151773721], [151779462, 151779707], [151785587, 151785753], [151789477, 151791236]]	[[151779672, 151779707], [151785587, 151785753], [151789477, 151790245]]
NM_024573	[[151773392, 151773721], [151775682, 151775788], [151779462, 151779707], [151785587, 151785753], [151789477, 151791236]]	[[151773680, 151773721], [151775682, 151775788], [151779462, 151779707], [151785587, 151785753], [151789477, 151790245]]

Promoter

Chrom	Start	End	Description
chr6	151773583	151773677	CAGE_peak_1_at_C6orf211_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr6	GH06I151492	151492912	151495295	2.11	[{'connected_gene': 'CCDC170', 'score': 568.54}, {'connected_gene': 'RMND1', 'score': 23.17}, {'connected_gene': 'HSPA8P15', 'score': 16.1}, {'connected_gene': 'ZBTB2', 'score': 12.96}, {'connected_gene': 'ARMT1', 'score': 11.32}, {'connected_gene': 'ESR1', 'score': 4.4}, {'connected_gene': 'GC06M151579', 'score': 0.17}]
chr6	GH06I151455	151455846	151455995	0.31	[{'connected_gene': 'ARMT1', 'score': 0.77}, {'connected_gene': 'CCDC170', 'score': 0.28}]
chr6	GH06I151485	151485683	151485913	0.27	[{'connected_gene': 'ZBTB2', 'score': 2.1}, {'connected_gene': 'CCDC170', 'score': 0.44}, {'connected_gene': 'ARMT1', 'score': 0.29}]
chr6	GH06I151329	151329498	151331162	0.69	[{'connected_gene': 'ZBTB2', 'score': 10.64}, {'connected_gene': 'ENSG00000232290', 'score': 10.17}, {'connected_gene': 'ARMT1', 'score': 4.71}, {'connected_gene': 'AKAP12', 'score': 4.57}, {'connected_gene': 'RN7SKP268', 'score': 0.39}, {'connected_gene': 'PIR45449', 'score': 0.34}, {'connected_gene': 'GC06P151355', 'score': 0.34}]
chr6	GH06I151475	151475601	151476355	1	[{'connected_gene': 'RMND1', 'score': 13.94}, {'connected_gene': 'CCDC170', 'score': 0.37}, {'connected_gene': 'ARMT1', 'score': 0.34}]
chr6	GH06I151481	151481401	151483399	0.87	[{'connected_gene': 'RMND1', 'score': 10.29}, {'connected_gene': 'CCDC170', 'score': 8.41}, {'connected_gene': 'ZBTB2', 'score': 2.26}, {'connected_gene': 'ARMT1', 'score': 0.29}]
chr6	GH06I151394	151394722	151395575	0.31	[{'connected_gene': 'RMND1', 'score': 20.82}, {'connected_gene': 'ARMT1', 'score': 11.79}, {'connected_gene': 'AKAP12', 'score': 10.54}, {'connected_gene': 'ZBTB2', 'score': 0.77}, {'connected_gene': 'HSPA8P15', 'score': 0.37}]
chr6	GH06I151399	151399356	151400625	0.65	[{'connected_gene': 'RMND1', 'score': 21.76}, {'connected_gene': 'ARMT1', 'score': 11.38}, {'connected_gene': 'AKAP12', 'score': 10.54}, {'connected_gene': 'ZBTB2', 'score': 0.44}, {'connected_gene': 'HSPA8P15', 'score': 0.39}]
chr6	GH06I151487	151487540	151487717	0.22	[{'connected_gene': 'RMND1', 'score': 11.51}, {'connected_gene': 'ARMT1', 'score': 11.51}, {'connected_gene': 'CCDC170', 'score': 0.44}]
chr6	GH06I151501	151501268	151503066	0.84	[{'connected_gene': 'RMND1', 'score': 10.6}, {'connected_gene': 'ARMT1', 'score': 10.6}, {'connected_gene': 'CCDC170', 'score': 9.19}, {'connected_gene': 'GC06M151579', 'score': 0.18}]
chr6	GH06I151505	151505686	151505835	0.31	[{'connected_gene': 'RMND1', 'score': 10.59}, {'connected_gene': 'ARMT1', 'score': 10.59}, {'connected_gene': 'CCDC170', 'score': 0.39}, {'connected_gene': 'GC06M151579', 'score': 0.18}]
chr6	GH06I151425	151425166	151426114	0.38	[{'connected_gene': 'RMND1', 'score': 26.91}, {'connected_gene': 'ARMT1', 'score': 11.8}, {'connected_gene': 'ZBTB2', 'score': 11.49}, {'connected_gene': 'AKAP12', 'score': 9.5}, {'connected_gene': 'HSPA8P15', 'score': 0.39}]
chr6	GH06I151497	151497202	151500400	1.25	[{'connected_gene': 'RMND1', 'score': 23.58}, {'connected_gene': 'ARMT1', 'score': 11.16}, {'connected_gene': 'RNU6-813P', 'score': 10.8}, {'connected_gene': 'CCDC170', 'score': 10.58}, {'connected_gene': 'ZBTB2', 'score': 1.23}, {'connected_gene': 'GC06M151579', 'score': 0.18}]
chr6	GH06I151450	151450801	151453801	2.12	[{'connected_gene': 'RMND1', 'score': 566.61}, {'connected_gene': 'ARMT1', 'score': 550.77}, {'connected_gene': 'HSPA8P15', 'score': 25.76}, {'connected_gene': 'ZBTB2', 'score': 23.69}, {'connected_gene': 'CCDC170', 'score': 0.26}]
chr6	GH06I151806	151806958	151809799	1.42	[{'connected_gene': 'ESR1', 'score': 550.1}, {'connected_gene': 'ARMT1', 'score': 5.77}, {'connected_gene': 'GC06P151812', 'score': 0.77}, {'connected_gene': 'GC06P151669', 'score': 0.11}]
chr6	GH06I151413	151413643	151414495	0.43	[{'connected_gene': 'HSPA8P15', 'score': 562.64}, {'connected_gene': 'RMND1', 'score': 27.03}, {'connected_gene': 'ZBTB2', 'score': 12.34}, {'connected_gene': 'ARMT1', 'score': 11.61}]