PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000521891	[[77593453, 77593855], [77616277, 77618913], [77619780, 77620283], [77690443, 77690675], [77745573, 77745642], [77754890, 77755007], [77761230, 77761364], [77761747, 77761948], [77762480, 77762598], [77763121, 77768536], [77775329, 77779521]]	[[77616323, 77618913], [77619780, 77620283], [77690443, 77690675], [77745573, 77745642], [77754890, 77755007], [77761230, 77761364], [77761747, 77761948], [77762480, 77762598], [77763121, 77768536], [77775329, 77776801]]
ENST00000517683	[[77593473, 77593855], [77690443, 77690675]]	None
ENST00000458716	[[77593514, 77593855], [77616277, 77618913], [77619858, 77620493]]	None
ENST00000050961	[[77593514, 77593855], [77616277, 77618913], [77619858, 77620283], [77690443, 77690675], [77745573, 77745625], [77754900, 77755007], [77761260, 77761364], [77761747, 77761948], [77762480, 77762598], [77763121, 77768536], [77768574, 77768583], [77775350, 77776801]]	[[77616323, 77618913], [77619858, 77620283], [77690443, 77690675], [77745573, 77745625], [77754900, 77755007], [77761260, 77761364], [77761747, 77761948], [77762480, 77762598], [77763121, 77768536], [77768574, 77768583], [77775350, 77776801]]
ENST00000455469	[[77593514, 77593855], [77616277, 77618913], [77619858, 77620283], [77690443, 77690675], [77745573, 77745625], [77754900, 77755007], [77761260, 77761364], [77761747, 77761948], [77762480, 77762598], [77763121, 77768536], [77775329, 77779520]]	[[77616323, 77618913], [77619858, 77620283], [77690443, 77690675], [77745573, 77745625], [77754900, 77755007], [77761260, 77761364], [77761747, 77761948], [77762480, 77762598], [77763121, 77768536], [77775329, 77776801]]
ENST00000518282	[[77616279, 77618913], [77619858, 77620283], [77690443, 77690675], [77745573, 77745642], [77754890, 77755007], [77761230, 77761364], [77761747, 77761948], [77762480, 77762598], [77763121, 77768536], [77775329, 77778159]]	[[77616323, 77618913], [77619858, 77620283], [77690443, 77690675], [77745573, 77745642], [77754890, 77755007], [77761230, 77761364], [77761747, 77761948], [77762480, 77762598], [77763121, 77768536], [77775329, 77776801]]
ENST00000523625	[[77690517, 77690675], [77745573, 77745642], [77746356, 77746670], [77754890, 77755007], [77761230, 77761364], [77761747, 77761944]]	[[77690517, 77690675], [77745573, 77745642], [77746356, 77746376]]
ENST00000524290	[[77690523, 77690675], [77745573, 77745862]]	None
ENST00000519536	[[77690523, 77690675], [77694378, 77694454], [77745573, 77745642], [77754890, 77755007], [77761230, 77761307]]	[[77690523, 77690675], [77694378, 77694454], [77745573, 77745604]]
ENST00000520307	[[77594761, 77594867], [77616277, 77616789]]	[[77616323, 77616789]]
ENST00000523885	[[77596015, 77596190], [77616277, 77616626]]	[[77616323, 77616626]]
ENST00000517585	[[77605640, 77605741], [77616277, 77616789]]	[[77616323, 77616789]]
ENST00000523809	[[77605667, 77605741], [77615832, 77615853], [77616277, 77616743]]	[[77616323, 77616743]]
ENST00000522409	[[77762035, 77762598], [77763121, 77763181]]	None
NM_024721	[[77593514, 77593855], [77616277, 77618913], [77619780, 77620283], [77690443, 77690675], [77745573, 77745642], [77754890, 77755007], [77761230, 77761364], [77761747, 77761948], [77762480, 77762598], [77763121, 77768536], [77775329, 77779521]]	[[77616323, 77618913], [77619780, 77620283], [77690443, 77690675], [77745573, 77745642], [77754890, 77755007], [77761230, 77761364], [77761747, 77761948], [77762480, 77762598], [77763121, 77768536], [77775329, 77776801]]

Promoter

Chrom	Start	End	Description
chr8	77593448	77593471	CAGE_peak_2_at_ZFHX4_5end
chr8	77593474	77593612	CAGE_peak_1_at_ZFHX4_5end
chr8	77593629	77593641	CAGE_peak_10_at_ZFHX4_5end
chr8	77593750	77593757	CAGE_peak_3_at_ZFHX4_5end
chr8	77595678	77595688	CAGE_peak_9_at_ZFHX4_5end
chr8	77596014	77596033	CAGE_peak_6_at_ZFHX4_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr8	GH08I076672	76672167	76675563	1.86	[{'connected_gene': 'ZFHX4', 'score': 2.22}, {'connected_gene': 'ZFHX4-AS1', 'score': 0.44}, {'connected_gene': 'MRPL9P1', 'score': 0.2}]
chr8	GH08I076665	76665797	76666066	0.51	[{'connected_gene': 'ZFHX4', 'score': 0.37}, {'connected_gene': 'ZFHX4-AS1', 'score': 0.37}, {'connected_gene': 'MRPL9P1', 'score': 0.21}]
chr8	GH08I076666	76665291	76665638	0.51	[{'connected_gene': 'ZFHX4', 'score': 0.37}, {'connected_gene': 'ZFHX4-AS1', 'score': 0.37}, {'connected_gene': 'MRPL9P1', 'score': 0.21}]
chr8	GH08I076669	76669960	76670257	0.89	[{'connected_gene': 'ZFHX4', 'score': 0.39}, {'connected_gene': 'ZFHX4-AS1', 'score': 0.39}, {'connected_gene': 'MRPL9P1', 'score': 0.2}]
chr8	GH08I076680	76680267	76685517	2.7	[{'connected_gene': 'ZFHX4', 'score': 550.77}, {'connected_gene': 'ZFHX4-AS1', 'score': 550.77}, {'connected_gene': 'HIGD1AP18', 'score': 4.09}]
chr8	GH08I076847	76847817	76848189	0.4	[{'connected_gene': 'ZFHX4', 'score': 6.79}, {'connected_gene': 'GC08P076864', 'score': 0.37}, {'connected_gene': 'GC08M076785', 'score': 0.22}]
chr8	GH08I076819	76819149	76819166	0.22	[{'connected_gene': 'ZFHX4', 'score': 3.85}, {'connected_gene': 'GC08M076785', 'score': 0.31}, {'connected_gene': 'GC08P076864', 'score': 0.25}]
chr8	GH08I076663	76663575	76663825	0.4	[{'connected_gene': 'MRPL9P1', 'score': 4.56}, {'connected_gene': 'ZFHX4', 'score': 0.37}, {'connected_gene': 'ZFHX4-AS1', 'score': 0.37}]
chr8	GH08I076617	76617566	76617715	0.49	[{'connected_gene': 'MRPL9P1', 'score': 0.39}, {'connected_gene': 'ZFHX4', 'score': 0.21}, {'connected_gene': 'ZFHX4-AS1', 'score': 0.2}]
chr8	GH08I076676	76676175	76679960	1.44	[{'connected_gene': 'ZFHX4-AS1', 'score': 5.28}, {'connected_gene': 'ZFHX4', 'score': 2.83}, {'connected_gene': 'MRPL9P1', 'score': 0.19}]
chr8	GH08I076685	76685772	76688410	1.87	[{'connected_gene': 'ZFHX4-AS1', 'score': 0.77}, {'connected_gene': 'ZFHX4', 'score': 0.44}, {'connected_gene': 'GC08P076707', 'score': 0.34}]
chr8	GH08I076698	76698422	76700733	1.17	[{'connected_gene': 'ZFHX4-AS1', 'score': 4.47}, {'connected_gene': 'GC08P076707', 'score': 0.44}, {'connected_gene': 'ZFHX4', 'score': 0.37}]
chr8	GH08I076696	76696277	76696603	0.6	[{'connected_gene': 'ZFHX4-AS1', 'score': 0.39}, {'connected_gene': 'GC08P076707', 'score': 0.39}, {'connected_gene': 'ZFHX4', 'score': 0.37}]
chr8	GH08I076778	76778028	76779543	1.23	[{'connected_gene': 'ZFHX4-AS1', 'score': 4.68}, {'connected_gene': 'GC08M076785', 'score': 0.39}, {'connected_gene': 'GC08M076743', 'score': 0.29}, {'connected_gene': 'ZFHX4', 'score': 0.15}]
chr8	GH08I076702	76702179	76707064	0.49	[{'connected_gene': 'GC08P076707', 'score': 0.77}, {'connected_gene': 'ZFHX4', 'score': 0.34}, {'connected_gene': 'ZFHX4-AS1', 'score': 0.34}]
chr8	GH08I076839	76839317	76842107	1.26	[{'connected_gene': 'GC08P076864', 'score': 0.34}, {'connected_gene': 'GC08M076785', 'score': 0.23}, {'connected_gene': 'ZFHX4', 'score': 0.1}]
chr8	GH08I076810	76810291	76811507	0.96	[{'connected_gene': 'GC08M076785', 'score': 0.34}, {'connected_gene': 'GC08P076864', 'score': 0.23}, {'connected_gene': 'ZFHX4', 'score': 0.13}]
chr8	GH08I076842	76842876	76843172	0.51	[{'connected_gene': 'GC08P076864', 'score': 0.34}, {'connected_gene': 'GC08M076785', 'score': 0.23}, {'connected_gene': 'ZFHX4', 'score': 0.1}]
chr8	GH08I076865	76865187	76865680	0.63	[{'connected_gene': 'GC08P076864', 'score': 550.77}, {'connected_gene': 'ENSG00000253416', 'score': 0.28}, {'connected_gene': 'ZFHX4', 'score': 0.09}]
chr8	GH08I076781	76781760	76782384	0.31	[{'connected_gene': 'GC08M076785', 'score': 0.44}, {'connected_gene': 'GC08M076743', 'score': 0.28}, {'connected_gene': 'ZFHX4', 'score': 0.15}]
chr8	GH08I076797	76797627	76799535	0.92	[{'connected_gene': 'GC08M076785', 'score': 0.44}, {'connected_gene': 'GC08P076864', 'score': 0.2}, {'connected_gene': 'ZFHX4', 'score': 0.13}]
chr8	GH08I076864	76864614	76865149	0.58	[{'connected_gene': 'GC08P076864', 'score': 550.77}, {'connected_gene': 'ENSG00000253416', 'score': 0.28}, {'connected_gene': 'ZFHX4', 'score': 0.09}]
chr8	GH08I076868	76865875	76866349	0.4	[{'connected_gene': 'GC08P076864', 'score': 550.77}, {'connected_gene': 'ENSG00000253416', 'score': 0.28}, {'connected_gene': 'ZFHX4', 'score': 0.09}]
chr8	GH08I076799	76799865	76802758	0.99	[{'connected_gene': 'GC08M076785', 'score': 0.39}, {'connected_gene': 'GC08P076864', 'score': 0.21}, {'connected_gene': 'ZFHX4', 'score': 0.13}]
chr8	GH08I076866	76866857	76867284	0.4	[{'connected_gene': 'GC08P076864', 'score': 0.77}, {'connected_gene': 'ENSG00000253416', 'score': 0.28}, {'connected_gene': 'ZFHX4', 'score': 0.09}]
chr8	GH08I076867	76866477	76866753	0.4	[{'connected_gene': 'GC08P076864', 'score': 550.77}, {'connected_gene': 'ENSG00000253416', 'score': 0.28}, {'connected_gene': 'ZFHX4', 'score': 0.09}]
chr8	GH08I076777	76777245	76777474	0.43	[{'connected_gene': 'GC08M076785', 'score': 0.39}, {'connected_gene': 'GC08M076743', 'score': 0.29}, {'connected_gene': 'ZFHX4', 'score': 0.15}]
chr8	GH08I076735	76735629	76736104	0.4	[{'connected_gene': 'GC08P076740', 'score': 0.77}, {'connected_gene': 'ENSG00000276673', 'score': 0.77}, {'connected_gene': 'ZFHX4', 'score': 0.23}]
chr8	GH08I076775	76775189	76776941	0.78	[{'connected_gene': 'GC08M076785', 'score': 0.39}, {'connected_gene': 'GC08M076743', 'score': 0.31}, {'connected_gene': 'ZFHX4', 'score': 0.16}]
chr8	GH08I076804	76804884	76805101	0.4	[{'connected_gene': 'GC08M076785', 'score': 0.39}, {'connected_gene': 'GC08P076864', 'score': 0.22}, {'connected_gene': 'ZFHX4', 'score': 0.13}]
chr8	GH08I076707	76707500	76707897	0.31	[{'connected_gene': 'GC08P076707', 'score': 550.77}, {'connected_gene': 'ZFHX4', 'score': 0.31}, {'connected_gene': 'ENSG00000276673', 'score': 0.31}]
chr8	GH08I076732	76732801	76733400	0.43	[{'connected_gene': 'ENSG00000276673', 'score': 550.77}, {'connected_gene': 'GC08P076707', 'score': 0.31}, {'connected_gene': 'ZFHX4', 'score': 0.23}]
chr8	GH08I076808	76808453	76808825	0.58	[{'connected_gene': 'GC08M076785', 'score': 0.37}, {'connected_gene': 'GC08P076864', 'score': 0.22}, {'connected_gene': 'ZFHX4', 'score': 0.13}]