PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000466986	[[96115517, 96115729], [96135934, 96136010], [96324109, 96324203], [96338999, 96339124]]	None
ENST00000417009	[[96251873, 96251955], [96324109, 96324203], [96338999, 96339173]]	[[96251927, 96251955], [96324109, 96324203], [96338999, 96339075]]
ENST00000444799	[[96279526, 96279831], [96324109, 96324203], [96338999, 96339170]]	[[96279812, 96279831], [96324109, 96324203], [96338999, 96339075]]
ENST00000449279	[[96301875, 96302120], [96302211, 96302264], [96303057, 96303171], [96324109, 96324203], [96338999, 96339192]]	[[96303071, 96303171], [96324109, 96324203], [96338999, 96339075]]
ENST00000488005	[[96302560, 96303171], [96338999, 96339163]]	None
ENST00000413065	[[96302768, 96303171], [96324109, 96324203], [96338999, 96339163]]	[[96303071, 96303171], [96324109, 96324203], [96338999, 96339075]]
ENST00000248566	[[96317769, 96318278], [96324109, 96324203], [96338999, 96339203]]	[[96318235, 96318278], [96324109, 96324203], [96338999, 96339075]]
ENST00000476463	[[96335533, 96335707], [96337459, 96337526], [96338999, 96339185]]	None
ENST00000493858	[[96110937, 96113300], [96114136, 96114166], [96115514, 96115729], [96125595, 96125653], [96132794, 96132835]]	None
ENST00000482389	[[96318080, 96318278], [96324109, 96326684]]	None
NM_006304	[[96318078, 96318278], [96324109, 96324203], [96338999, 96339203]]	[[96318235, 96318278], [96324109, 96324203], [96338999, 96339075]]

Promoter

Chrom	Start	End	Description
chr7	96339132	96339166	CAGE_peak_1_at_SHFM1_5end
chr7	96339167	96339197	CAGE_peak_2_at_SHFM1_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr7	GH07I096833	96833178	96834604	0.84	[{'connected_gene': 'SEM1', 'score': 10.71}, {'connected_gene': 'DLX6', 'score': 4.78}, {'connected_gene': 'MARK2P10', 'score': 0.34}, {'connected_gene': 'LOC105375414', 'score': 0.25}]
chr7	GH07I096727	96727661	96727963	0.22	[{'connected_gene': 'SEM1', 'score': 0.37}, {'connected_gene': 'LOC105375414', 'score': 0.22}]
chr7	GH07I096596	96596589	96596738	0.57	[{'connected_gene': 'SEM1', 'score': 10.51}, {'connected_gene': 'GC07M096611', 'score': 0.37}, {'connected_gene': 'LOC105375412', 'score': 0.17}]
chr7	GH07I096708	96708272	96710620	2.05	[{'connected_gene': 'SEM1', 'score': 550.77}, {'connected_gene': 'GC07M096611', 'score': 0.15}]
chr7	GH07I096666	96666484	96666656	0.22	[{'connected_gene': 'SEM1', 'score': 11.37}, {'connected_gene': 'GC07M096611', 'score': 0.23}]
chr7	GH07I096785	96785869	96787249	0.43	[{'connected_gene': 'LOC105375414', 'score': 550.77}, {'connected_gene': 'SEM1', 'score': 0.18}]
chr7	GH07I096521	96521360	96521846	0.38	[{'connected_gene': 'LOC105375412', 'score': 0.39}, {'connected_gene': 'GC07M096611', 'score': 0.16}, {'connected_gene': 'SEM1', 'score': 0.09}]
chr7	GH07I096495	96495606	96496103	0.69	[{'connected_gene': 'LOC105375412', 'score': 0.39}, {'connected_gene': 'LOC105375411', 'score': 0.25}, {'connected_gene': 'SEM1', 'score': 0.08}]
chr7	GH07I096656	96656138	96656475	0.2	[{'connected_gene': 'GC07M096611', 'score': 0.26}, {'connected_gene': 'SEM1', 'score': 0.23}]
chr7	GH07I096657	96657030	96658418	0.38	[{'connected_gene': 'GC07M096611', 'score': 0.26}, {'connected_gene': 'SEM1', 'score': 0.23}]
chr7	GH07I096591	96591488	96592748	1.25	[{'connected_gene': 'GC07M096611', 'score': 0.34}, {'connected_gene': 'LOC105375412', 'score': 0.18}, {'connected_gene': 'SEM1', 'score': 0.13}]