PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000376356	[[25305586, 25305621], [25310670, 25310837], [25312104, 25315593]]	[[25312152, 25314384]]
ENST00000524413	[[25305586, 25305718], [25310670, 25310837], [25312104, 25315593]]	[[25312152, 25314384]]
NM_024838	[[25305507, 25305621], [25310670, 25310837], [25312104, 25315593]]	[[25312152, 25314384]]

Promoter

Chrom	Start	End	Description
chr10	25305502	25305523	CAGE_peak_2_at_THNSL1_5end
chr10	25305524	25305595	CAGE_peak_1_at_THNSL1_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr10	GH10I024974	24974570	24975801	0.89	[{'connected_gene': 'THNSL1', 'score': 16.38}, {'connected_gene': 'PRTFDC1', 'score': 12.12}, {'connected_gene': 'ENKUR', 'score': 10.29}]
chr10	GH10I024302	24302508	24303141	0.2	[{'connected_gene': 'THNSL1', 'score': 4.74}, {'connected_gene': 'GC10M024284', 'score': 0.37}, {'connected_gene': 'GC10M024447', 'score': 0.11}, {'connected_gene': 'KIAA1217', 'score': 0.03}]
chr10	GH10I024306	24306323	24306789	0.51	[{'connected_gene': 'THNSL1', 'score': 4.43}, {'connected_gene': 'GC10M024284', 'score': 0.37}, {'connected_gene': 'GC10M024447', 'score': 0.11}, {'connected_gene': 'KIAA1217', 'score': 0.03}]
chr10	GH10I024988	24988872	24989021	0.72	[{'connected_gene': 'THNSL1', 'score': 16.19}, {'connected_gene': 'ENKUR', 'score': 11.66}, {'connected_gene': 'ARHGAP21', 'score': 10.97}, {'connected_gene': 'PRTFDC1', 'score': 0.28}]
chr10	GH10I024985	24985032	24985181	0.4	[{'connected_gene': 'THNSL1', 'score': 16.26}, {'connected_gene': 'ENKUR', 'score': 11.65}, {'connected_gene': 'ARHGAP21', 'score': 10.98}, {'connected_gene': 'PRTFDC1', 'score': 0.29}]
chr10	GH10I024962	24962277	24964414	1	[{'connected_gene': 'THNSL1', 'score': 10.22}, {'connected_gene': 'ENKUR', 'score': 10.14}, {'connected_gene': 'PRTFDC1', 'score': 0.44}]
chr10	GH10I025067	25067105	25069364	1.2	[{'connected_gene': 'THNSL1', 'score': 11.37}, {'connected_gene': 'ENKUR', 'score': 6.81}, {'connected_gene': 'LINC01516', 'score': 0.26}]
chr10	GH10I024651	24650971	24651559	0.2	[{'connected_gene': 'THNSL1', 'score': 10.7}, {'connected_gene': 'ENKUR', 'score': 10.7}, {'connected_gene': 'GC10P024656', 'score': 0.77}, {'connected_gene': 'RNA5SP305', 'score': 0.39}, {'connected_gene': 'ARHGAP21', 'score': 0.19}, {'connected_gene': 'GC10P024495', 'score': 0.1}]
chr10	GH10I025015	25015364	25018246	2.08	[{'connected_gene': 'THNSL1', 'score': 561.33}, {'connected_gene': 'ENKUR', 'score': 557.0}]
chr10	GH10I024650	24650811	24650941	0.2	[{'connected_gene': 'ARHGAP21', 'score': 11.34}, {'connected_gene': 'THNSL1', 'score': 10.7}, {'connected_gene': 'ENKUR', 'score': 10.7}, {'connected_gene': 'GC10P024656', 'score': 0.77}, {'connected_gene': 'RNA5SP305', 'score': 0.39}, {'connected_gene': 'GC10P024495', 'score': 0.1}]
chr10	GH10I024857	24857304	24859740	0.52	[{'connected_gene': 'ARHGAP21', 'score': 11.42}, {'connected_gene': 'THNSL1', 'score': 5.83}, {'connected_gene': 'ENSG00000228667', 'score': 0.44}, {'connected_gene': 'LOC105376456', 'score': 0.18}, {'connected_gene': 'PRTFDC1', 'score': 0.15}]
chr10	GH10I024790	24790788	24790963	0.77	[{'connected_gene': 'ARHGAP21', 'score': 4.51}, {'connected_gene': 'PRTFDC1', 'score': 1.53}, {'connected_gene': 'THNSL1', 'score': 1.39}, {'connected_gene': 'GPR158', 'score': 1.27}, {'connected_gene': 'LOC105376456', 'score': 0.39}, {'connected_gene': 'ENSG00000228667', 'score': 0.18}, {'connected_gene': 'GC10P024495', 'score': 0.06}]
chr10	GH10I024956	24956691	24959763	1.49	[{'connected_gene': 'PRTFDC1', 'score': 7.17}, {'connected_gene': 'THNSL1', 'score': 4.81}, {'connected_gene': 'ARHGAP21', 'score': 2.67}, {'connected_gene': 'GPR158', 'score': 1.23}]
chr10	GH10I024951	24951092	24954480	2.44	[{'connected_gene': 'PRTFDC1', 'score': 566.48}, {'connected_gene': 'ENSG00000273107', 'score': 550.77}, {'connected_gene': 'THNSL1', 'score': 2.08}, {'connected_gene': 'GPR158', 'score': 1.97}, {'connected_gene': 'ARHGAP21', 'score': 1.68}, {'connected_gene': 'GC10M024909', 'score': 0.26}, {'connected_gene': 'RN7SKP241', 'score': 0.26}]
chr10	GH10I024038	24038738	24042384	0.74	[{'connected_gene': 'KIAA1217', 'score': 6.13}, {'connected_gene': 'THNSL1', 'score': 4.78}, {'connected_gene': 'GC10P024032', 'score': 0.44}, {'connected_gene': 'GC10P024109', 'score': 0.2}]
chr10	GH10I024992	24992809	24994219	0.59	[{'connected_gene': 'ENKUR', 'score': 18.42}, {'connected_gene': 'THNSL1', 'score': 11.8}, {'connected_gene': 'ARHGAP21', 'score': 10.97}, {'connected_gene': 'PRTFDC1', 'score': 0.28}]
chr10	GH10I024968	24968871	24970713	0.58	[{'connected_gene': 'ENKUR', 'score': 17.11}, {'connected_gene': 'THNSL1', 'score': 15.09}, {'connected_gene': 'PRTFDC1', 'score': 4.89}]
chr10	GH10I025048	25048052	25049147	1	[{'connected_gene': 'ENKUR', 'score': 0.39}, {'connected_gene': 'THNSL1', 'score': 0.29}]
chr10	GH10I025057	25057488	25058376	0.31	[{'connected_gene': 'ENKUR', 'score': 7.16}, {'connected_gene': 'THNSL1', 'score': 0.26}]
chr10	GH10I025059	25059275	25063845	2.18	[{'connected_gene': 'ENKUR', 'score': 550.77}, {'connected_gene': 'THNSL1', 'score': 5.31}]
chr10	GH10I024866	24866367	24867846	1.34	[{'connected_gene': 'ENSG00000228667', 'score': 550.77}, {'connected_gene': 'THNSL1', 'score': 4.46}, {'connected_gene': 'ARHGAP21', 'score': 1.63}, {'connected_gene': 'PRTFDC1', 'score': 0.17}, {'connected_gene': 'LOC105376456', 'score': 0.17}]