PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000368891	[[124690418, 124692177], [124697220, 124697675], [124708164, 124708371], [124711469, 124711542], [124712344, 124712544], [124713530, 124713827]]	None
ENST00000481909	[[124691023, 124692177], [124697220, 124697675], [124708164, 124708371], [124711469, 124711542], [124712344, 124712548], [124713530, 124713919]]	[[124691942, 124692177], [124697220, 124697675], [124708164, 124708371], [124711469, 124711542], [124712344, 124712548], [124713530, 124713694]]
ENST00000462191	[[124691924, 124692177], [124692889, 124692975]]	None
ENST00000470158	[[124692118, 124692177], [124697220, 124697675], [124708164, 124708271], [124711469, 124711523]]	None
NM_024942	[[124690418, 124692177], [124697220, 124697675], [124708164, 124708371], [124711469, 124711542], [124712344, 124712548], [124713530, 124713919]]	[[124691942, 124692177], [124697220, 124697675], [124708164, 124708371], [124711469, 124711542], [124712344, 124712548], [124713530, 124713694]]

Promoter

Chrom	Start	End	Description
chr10	124713698	124713749	CAGE_peak_1_at_C10orf88_5end
chr10	124713842	124713853	CAGE_peak_3_at_C10orf88_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr10	GH10I122860	122860620	122865741	1.25	[{'connected_gene': 'C10orf88', 'score': 10.64}, {'connected_gene': 'ACADSB', 'score': 4.72}, {'connected_gene': 'CUZD1', 'score': 0.39}, {'connected_gene': 'LOC399815', 'score': 0.37}, {'connected_gene': 'FAM24B-CUZD1', 'score': 0.37}, {'connected_gene': 'FAM24B', 'score': 0.37}, {'connected_gene': 'GC10M122775', 'score': 0.12}]
chr10	GH10I122939	122939094	122940492	0.56	[{'connected_gene': 'C10orf88', 'score': 6.96}, {'connected_gene': 'ACADSB', 'score': 4.89}, {'connected_gene': 'PSTK', 'score': 0.39}, {'connected_gene': 'FAM24A', 'score': 0.31}, {'connected_gene': 'GC10M122775', 'score': 0.21}]
chr10	GH10I122849	122849718	122857375	1.16	[{'connected_gene': 'C10orf88', 'score': 20.83}, {'connected_gene': 'FAM24B', 'score': 11.47}, {'connected_gene': 'LOC399815', 'score': 11.47}, {'connected_gene': 'ACADSB', 'score': 8.92}, {'connected_gene': 'IKZF5', 'score': 8.92}, {'connected_gene': 'CUZD1', 'score': 0.77}, {'connected_gene': 'FAM24B-CUZD1', 'score': 0.31}, {'connected_gene': 'GC10M122775', 'score': 0.11}]
chr10	GH10I122953	122953200	122954934	2.09	[{'connected_gene': 'C10orf88', 'score': 575.86}, {'connected_gene': 'PSTK', 'score': 550.77}, {'connected_gene': 'BUB3', 'score': 35.85}, {'connected_gene': 'IKZF5', 'score': 19.4}, {'connected_gene': 'FAM24A', 'score': 0.26}, {'connected_gene': 'GC10M122775', 'score': 0.25}]
chr10	GH10I122331	122331219	122332040	1.03	[{'connected_gene': 'IKZF5', 'score': 12.52}, {'connected_gene': 'BUB3', 'score': 12.23}, {'connected_gene': 'FAM24B', 'score': 10.92}, {'connected_gene': 'C10orf88', 'score': 10.58}, {'connected_gene': 'ARMS2', 'score': 10.03}, {'connected_gene': 'GC10P122346', 'score': 0.39}, {'connected_gene': 'BTBD16', 'score': 0.21}]
chr10	GH10I122845	122845405	122847303	1.04	[{'connected_gene': 'CUZD1', 'score': 550.77}, {'connected_gene': 'ACADSB', 'score': 13.71}, {'connected_gene': 'FAM24B', 'score': 11.45}, {'connected_gene': 'LOC399815', 'score': 11.45}, {'connected_gene': 'C10orf88', 'score': 9.85}, {'connected_gene': 'IKZF5', 'score': 8.92}, {'connected_gene': 'ENSG00000272135', 'score': 0.31}, {'connected_gene': 'FAM24B-CUZD1', 'score': 0.29}, {'connected_gene': 'GC10M122775', 'score': 0.1}]
chr10	GH10I123846	123846529	123850108	0.86	[{'connected_gene': 'EEF1AKMT2', 'score': 10.72}, {'connected_gene': 'IKZF5', 'score': 10.66}, {'connected_gene': 'C10orf88', 'score': 10.34}, {'connected_gene': 'LOC105378534', 'score': 0.25}, {'connected_gene': 'LOC105378533', 'score': 0.19}, {'connected_gene': 'CPXM2', 'score': 0.16}]
chr10	GH10I122930	122930335	122931984	0.82	[{'connected_gene': 'ACADSB', 'score': 14.67}, {'connected_gene': 'IKZF5', 'score': 10.19}, {'connected_gene': 'PSTK', 'score': 0.34}, {'connected_gene': 'FAM24A', 'score': 0.34}, {'connected_gene': 'C10orf88', 'score': 0.34}, {'connected_gene': 'GC10M122775', 'score': 0.2}]
chr10	GH10I122979	122979686	122981434	2.06	[{'connected_gene': 'PSTK', 'score': 550.31}, {'connected_gene': 'ACADSB', 'score': 23.45}, {'connected_gene': 'BUB3', 'score': 16.98}, {'connected_gene': 'IKZF5', 'score': 11.59}, {'connected_gene': 'BTBD16', 'score': 5.2}, {'connected_gene': 'GC10M122775', 'score': 0.34}, {'connected_gene': 'C10orf88', 'score': 0.31}]
chr10	GH10I122284	122284411	122288948	0.84	[{'connected_gene': 'BTBD16', 'score': 37.53}, {'connected_gene': 'C10orf88', 'score': 15.82}, {'connected_gene': 'HTRA1', 'score': 10.64}, {'connected_gene': 'GC10P122346', 'score': 0.22}]
chr10	GH10I123428	123428927	123429064	0.28	[{'connected_gene': 'ENSG00000225152', 'score': 550.77}, {'connected_gene': 'C10orf88', 'score': 1.29}, {'connected_gene': 'LOC105378531', 'score': 0.18}, {'connected_gene': 'GC10M123502', 'score': 0.18}]