PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000378036	[[15820168, 15821140], [15824153, 15824225], [15828559, 15828647], [15831245, 15831318], [15838098, 15838171], [15858833, 15860007]]	[[15820990, 15821140], [15824153, 15824225], [15828559, 15828647], [15831245, 15831318], [15838098, 15838168]]
ENST00000477891	[[15820168, 15821140], [15824153, 15824225], [15828559, 15828647], [15831245, 15831318], [15838098, 15838171], [15858833, 15858914], [15863654, 15863725], [15875628, 15875708], [15876541, 15876615], [15879202, 15879317], [15883424, 15883598], [15885210, 15885271], [15889862, 15889942], [15902204, 15902497]]	None
ENST00000277632	[[15820168, 15821140], [15824153, 15824225], [15828559, 15828647], [15831245, 15831318], [15838098, 15838171], [15858833, 15858914], [15863654, 15863725], [15875628, 15875708], [15876541, 15876615], [15879202, 15879317], [15880226, 15880278], [15883424, 15883598], [15885210, 15885271], [15889862, 15889942], [15902204, 15902519]]	[[15820990, 15821140], [15824153, 15824225], [15828559, 15828647], [15831245, 15831318], [15838098, 15838171], [15858833, 15858914], [15863654, 15863725], [15875628, 15875708], [15876541, 15876615], [15879202, 15879317], [15880226, 15880278], [15883424, 15883598], [15885210, 15885271], [15889862, 15889942], [15902204, 15902298]]
ENST00000418767	[[15830826, 15831318], [15838098, 15838171], [15858833, 15858914], [15863654, 15863725], [15875628, 15875708], [15876541, 15876615], [15879202, 15879298]]	[[15831244, 15831318], [15838098, 15838171], [15858833, 15858914], [15863654, 15863725], [15875628, 15875708], [15876541, 15876615], [15879202, 15879298]]
ENST00000436829	[[15838118, 15838171], [15858833, 15858914], [15863654, 15863725], [15875628, 15875708], [15876541, 15876615], [15879202, 15879317], [15879540, 15879632], [15880226, 15880278]]	[[15838118, 15838171], [15858833, 15858914], [15863654, 15863725], [15875628, 15875708], [15876541, 15876615], [15879202, 15879317], [15879540, 15879560]]
ENST00000476912	[[15820852, 15821140], [15824153, 15824334]]	None

Promoter

Chrom	Start	End	Description
chr10	15902304	15902313	CAGE_peak_3_at_FAM188A_5end
chr10	15902449	15902528	CAGE_peak_1_at_FAM188A_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr10	GH10I015747	15747407	15748937	0.58	[{'connected_gene': 'ITGA8', 'score': 12.72}, {'connected_gene': 'LOC101928678', 'score': 0.39}, {'connected_gene': 'MINDY3', 'score': 0.14}]
chr10	GH10I015751	15751054	15751768	0.43	[{'connected_gene': 'ITGA8', 'score': 12.71}, {'connected_gene': 'LOC101928678', 'score': 0.39}, {'connected_gene': 'MINDY3', 'score': 0.14}]
chr10	GH10I015794	15794232	15795377	0.64	[{'connected_gene': 'MINDY3', 'score': 9.82}, {'connected_gene': 'LOC101928678', 'score': 0.22}]
chr10	GH10I015791	15791485	15792634	1.15	[{'connected_gene': 'MINDY3', 'score': 9.82}, {'connected_gene': 'LOC101928678', 'score': 0.23}]
chr10	GH10I015856	15856416	15857011	1.06	[{'connected_gene': 'MINDY3', 'score': 0.77}, {'connected_gene': 'LOC101928678', 'score': 0.13}]
chr10	GH10I015858	15858600	15861275	1.99	[{'connected_gene': 'MINDY3', 'score': 556.18}, {'connected_gene': 'GC10P015861', 'score': 550.77}, {'connected_gene': 'LOC101928678', 'score': 0.13}]
chr10	GH10I015744	15744569	15746848	0.76	[{'connected_gene': 'MINDY3', 'score': 9.65}, {'connected_gene': 'LOC101928678', 'score': 0.44}]
chr10	GH10I015789	15789203	15790995	0.76	[{'connected_gene': 'MINDY3', 'score': 10.2}, {'connected_gene': 'LOC101928678', 'score': 0.23}]
chr10	GH10I015849	15849401	15849800	0.2	[{'connected_gene': 'MINDY3', 'score': 0.39}, {'connected_gene': 'LOC101928678', 'score': 0.14}]
chr10	GH10I015801	15801567	15802986	0.87	[{'connected_gene': 'MINDY3', 'score': 0.22}, {'connected_gene': 'LOC101928678', 'score': 0.21}]
chr10	GH10I015902	15902022	15902131	0.2	[{'connected_gene': 'MINDY3', 'score': 10.97}, {'connected_gene': 'GC10P015862', 'score': 0.28}, {'connected_gene': 'ENSG00000252537', 'score': 0.15}]
chr10	GH10I015434	15434201	15434800	0.98	[{'connected_gene': 'DCLRE1C', 'score': 75.48}, {'connected_gene': 'RPP38', 'score': 37.62}, {'connected_gene': 'HSPA14', 'score': 23.45}, {'connected_gene': 'MINDY3', 'score': 12.15}, {'connected_gene': 'FAM171A1', 'score': 7.34}, {'connected_gene': 'GC10P015448', 'score': 0.39}]
chr10	GH10I016814	16814801	16815200	0.2	[{'connected_gene': 'RSU1', 'score': 25.36}, {'connected_gene': 'MINDY3', 'score': 9.28}, {'connected_gene': 'ENSG00000275001', 'score': 0.25}]
chr10	GH10I016816	16816117	16818802	2.05	[{'connected_gene': 'RSU1', 'score': 589.76}, {'connected_gene': 'LOC105376435', 'score': 550.77}, {'connected_gene': 'MINDY3', 'score': 9.29}, {'connected_gene': 'ENSG00000275001', 'score': 0.23}]
chr10	GH10I015088	15088201	15089431	1.96	[{'connected_gene': 'ACBD7', 'score': 559.72}, {'connected_gene': 'C10orf111', 'score': 12.72}, {'connected_gene': 'MINDY3', 'score': 10.84}, {'connected_gene': 'RPP38', 'score': 4.69}, {'connected_gene': 'GAPDHP45', 'score': 0.77}]
chr10	GH10I015775	15775682	15775831	0.38	[{'connected_gene': 'LOC101928678', 'score': 0.28}, {'connected_gene': 'MINDY3', 'score': 0.18}]
chr10	GH10I015742	15742942	15743091	0.4	[{'connected_gene': 'LOC101928678', 'score': 0.44}, {'connected_gene': 'MINDY3', 'score': 0.13}]
chr10	GH10I015755	15755162	15755311	0.38	[{'connected_gene': 'LOC101928678', 'score': 0.37}, {'connected_gene': 'MINDY3', 'score': 0.14}]
chr10	GH10I015784	15784536	15785359	0.63	[{'connected_gene': 'LOC101928678', 'score': 0.25}, {'connected_gene': 'MINDY3', 'score': 0.18}]
chr10	GH10I015737	15737403	15740675	0.66	[{'connected_gene': 'LOC101928678', 'score': 550.77}, {'connected_gene': 'MINDY3', 'score': 0.13}]
chr10	GH10I016612	16612362	16612511	0.6	[{'connected_gene': 'ENSG00000225213', 'score': 10.12}, {'connected_gene': 'C1QL3', 'score': 9.46}, {'connected_gene': 'MINDY3', 'score': 9.01}, {'connected_gene': 'GC10P016625', 'score': 0.39}, {'connected_gene': 'GC10M016562', 'score': 0.26}, {'connected_gene': 'RSU1', 'score': 0.08}]