PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000367351	[[150263135, 150263293], [150266444, 150266708], [150267507, 150267789], [150268455, 150268587], [150269858, 150270371]]	[[150263208, 150263293], [150266444, 150266708], [150267507, 150267789], [150268455, 150268565]]
NM_025217	[[150263073, 150263293], [150266444, 150266708], [150267507, 150267789], [150268455, 150268587], [150269858, 150270371]]	[[150263208, 150263293], [150266444, 150266708], [150267507, 150267789], [150268455, 150268565]]

Promoter

Chrom	Start	End	Description
chr6	150263142	150263171	CAGE_peak_1_at_ULBP2_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr6	GH06I149962	149962670	149965727	2.35	[{'connected_gene': 'ULBP1', 'score': 578.81}, {'connected_gene': 'LATS1', 'score': 54.56}, {'connected_gene': 'NUP43', 'score': 38.37}, {'connected_gene': 'PPIL4', 'score': 21.15}, {'connected_gene': 'KATNA1', 'score': 18.59}, {'connected_gene': 'RAET1K', 'score': 16.65}, {'connected_gene': 'ENSG00000216906', 'score': 11.43}, {'connected_gene': 'ENSG00000233330', 'score': 10.53}, {'connected_gene': 'ULBP2', 'score': 8.78}, {'connected_gene': 'ENSG00000219298', 'score': 0.39}]
chr6	GH06I149941	149941400	149942614	1.9	[{'connected_gene': 'ULBP2', 'score': 562.61}, {'connected_gene': 'LATS1', 'score': 41.21}, {'connected_gene': 'PPIL4', 'score': 24.65}, {'connected_gene': 'KATNA1', 'score': 20.42}, {'connected_gene': 'NUP43', 'score': 15.32}, {'connected_gene': 'RPS18P9', 'score': 11.91}, {'connected_gene': 'ENSG00000233330', 'score': 9.98}, {'connected_gene': 'ENSG00000215094', 'score': 0.44}]
chr6	GH06I149937	149937839	149939245	0.98	[{'connected_gene': 'ULBP2', 'score': 11.0}, {'connected_gene': 'ULBP1', 'score': 9.42}, {'connected_gene': 'RAET1K', 'score': 9.23}, {'connected_gene': 'LOC105378052', 'score': 0.77}]
chr6	GH06I150014	150014862	150016078	0.75	[{'connected_gene': 'ULBP2', 'score': 13.26}, {'connected_gene': 'RAET1K', 'score': 0.39}, {'connected_gene': 'RAET1L', 'score': 0.39}]
chr6	GH06I150038	150038001	150038200	0.38	[{'connected_gene': 'ULBP2', 'score': 10.46}, {'connected_gene': 'ENSG00000235972', 'score': 0.77}, {'connected_gene': 'RAET1M', 'score': 0.44}]
chr6	GH06I150025	150025025	150026292	1.36	[{'connected_gene': 'RAET1L', 'score': 550.77}, {'connected_gene': 'ULBP2', 'score': 11.32}, {'connected_gene': 'RAET1M', 'score': 0.44}]
chr6	GH06I149074	149074147	149078060	1.3	[{'connected_gene': 'LOC105378047', 'score': 11.72}, {'connected_gene': 'LATS1', 'score': 11.66}, {'connected_gene': 'RNU7-3P', 'score': 11.02}, {'connected_gene': 'PPIL4', 'score': 11.02}, {'connected_gene': 'TAB2-AS1', 'score': 10.67}, {'connected_gene': 'ULBP2', 'score': 4.55}, {'connected_gene': 'LOC105378046', 'score': 0.31}, {'connected_gene': 'GC06M149112', 'score': 0.28}, {'connected_gene': 'UST', 'score': 0.05}]
chr6	GH06I150250	150250413	150258403	1.64	[{'connected_gene': 'ENSG00000268592', 'score': 15.94}, {'connected_gene': 'NUP43', 'score': 15.55}, {'connected_gene': 'ENSG00000216906', 'score': 15.04}, {'connected_gene': 'PPIL4', 'score': 13.33}, {'connected_gene': 'ENSG00000231760', 'score': 12.72}, {'connected_gene': 'KATNA1', 'score': 11.45}, {'connected_gene': 'LRP11', 'score': 11.34}, {'connected_gene': 'LATS1', 'score': 11.33}, {'connected_gene': 'ENSG00000238594', 'score': 11.3}, {'connected_gene': 'PPP1R14C', 'score': 10.82}, {'connected_gene': 'RAET1G', 'score': 3.97}, {'connected_gene': 'ULBP2', 'score': 1.63}, {'connected_gene': 'RAET1L', 'score': 1.25}, {'connected_gene': 'LOC105378054', 'score': 0.37}, {'connected_gene': 'GC06M150158', 'score': 0.14}]