PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000237837	[[4477392, 4479949], [4481759, 4481863], [4488537, 4488894]]	[[4479508, 4479949], [4481759, 4481863], [4488537, 4488748]]
NM_020638	[[4477392, 4479949], [4481759, 4481863], [4488537, 4488894]]	[[4479508, 4479949], [4481759, 4481863], [4488537, 4488748]]

Promoter

Chrom	Start	End	Description
chr12	4488872	4488879	CAGE_peak_1_at_FGF23_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr12	GH12I004305	4305294	4306148	0.31	[{'connected_gene': 'FGF23', 'score': 11.04}, {'connected_gene': 'TIGAR', 'score': 0.77}, {'connected_gene': 'PIR44232', 'score': 0.77}, {'connected_gene': 'CCND2', 'score': 0.29}]
chr12	GH12I004440	4439201	4439652	0.46	[{'connected_gene': 'FGF23', 'score': 10.78}, {'connected_gene': 'RAD51AP1', 'score': 10.08}, {'connected_gene': 'C12orf4', 'score': 10.08}, {'connected_gene': 'FGF6', 'score': 0.44}]
chr12	GH12I003918	3918110	3918132	0.23	[{'connected_gene': 'FGF23', 'score': 2.5}, {'connected_gene': 'GC12P005659', 'score': 0.31}, {'connected_gene': 'LOC105369608', 'score': 0.26}, {'connected_gene': 'GC12M003877', 'score': 0.26}]
chr12	GH12I004356	4356015	4356204	0.56	[{'connected_gene': 'FGF23', 'score': 0.34}, {'connected_gene': 'RPS15P7', 'score': 0.29}, {'connected_gene': 'TIGAR', 'score': 0.25}]
chr12	GH12I004378	4378409	4379845	1.04	[{'connected_gene': 'FGF23', 'score': 550.77}, {'connected_gene': 'RPS15P7', 'score': 0.23}]
chr12	GH12I004439	4439782	4442727	0.95	[{'connected_gene': 'C12orf4', 'score': 14.46}, {'connected_gene': 'FGF23', 'score': 10.77}, {'connected_gene': 'RAD51AP1', 'score': 10.08}, {'connected_gene': 'FGF6', 'score': 0.77}]
chr12	GH12I004339	4339177	4339554	0.24	[{'connected_gene': 'PARP11', 'score': 2.54}, {'connected_gene': 'TIGAR', 'score': 2.35}, {'connected_gene': 'CCND2', 'score': 1.49}, {'connected_gene': 'RPS15P7', 'score': 0.39}, {'connected_gene': 'FGF23', 'score': 0.26}]
chr12	GH12I004506	4506311	4508121	0.75	[{'connected_gene': 'FGF6', 'score': 11.39}, {'connected_gene': 'FGF23', 'score': 11.09}, {'connected_gene': 'RAD51AP1', 'score': 10.84}, {'connected_gene': 'C12orf4', 'score': 10.84}, {'connected_gene': 'TIGAR', 'score': 5.21}]
chr12	GH12I004414	4414696	4415622	0.8	[{'connected_gene': 'FGF6', 'score': 11.46}, {'connected_gene': 'FGF23', 'score': 11.42}, {'connected_gene': 'RAD51AP1', 'score': 10.08}, {'connected_gene': 'C12orf4', 'score': 10.08}]
chr12	GH12I004505	4505549	4506050	0.38	[{'connected_gene': 'FGF6', 'score': 11.39}, {'connected_gene': 'FGF23', 'score': 11.09}, {'connected_gene': 'RAD51AP1', 'score': 10.84}, {'connected_gene': 'C12orf4', 'score': 10.84}]
chr12	GH12I004445	4445533	4445592	0.5	[{'connected_gene': 'FGF6', 'score': 550.77}, {'connected_gene': 'FGF23', 'score': 0.2}]
chr12	GH12I004434	4434339	4435444	0.81	[{'connected_gene': 'FGF6', 'score': 0.39}, {'connected_gene': 'FGF23', 'score': 0.22}]
chr12	GH12I004392	4392558	4392761	0.42	[{'connected_gene': 'FGF6', 'score': 11.12}, {'connected_gene': 'RAD51AP1', 'score': 10.4}, {'connected_gene': 'C12orf4', 'score': 10.4}, {'connected_gene': 'FGF23', 'score': 0.39}]
chr12	GH12I004383	4383000	4383822	0.52	[{'connected_gene': 'FGF6', 'score': 10.6}, {'connected_gene': 'RAD51AP1', 'score': 10.02}, {'connected_gene': 'C12orf4', 'score': 10.02}, {'connected_gene': 'FGF23', 'score': 0.77}]
chr12	GH12I004302	4302464	4304244	0.58	[{'connected_gene': 'PIR44232', 'score': 550.77}, {'connected_gene': 'FGF23', 'score': 11.03}, {'connected_gene': 'TIGAR', 'score': 0.77}, {'connected_gene': 'CCND2', 'score': 0.31}]
chr12	GH12I004300	4300382	4301404	0.38	[{'connected_gene': 'PIR44232', 'score': 550.77}, {'connected_gene': 'FGF23', 'score': 11.03}, {'connected_gene': 'CCND2-AS1', 'score': 0.34}, {'connected_gene': 'CCND2', 'score': 0.31}]