PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000443613	[[14530618, 14535334], [14536350, 14536497], [14537924, 14538068], [14545073, 14545179], [14547122, 14547297], [14548308, 14548488], [14549068, 14549208], [14551327, 14551472], [14552672, 14552818], [14552920, 14552987], [14554284, 14554365], [14555172, 14555318], [14555799, 14555986], [14558571, 14558721], [14559279, 14559405], [14561613, 14561786], [14561896, 14562044], [14563148, 14563294], [14564506, 14564582], [14565118, 14565205], [14565899, 14566045], [14566943, 14567079], [14567357, 14567438], [14581775, 14581836]]	None
ENST00000273083	[[14530618, 14535334], [14536350, 14536497], [14537924, 14538068], [14545073, 14545179], [14547122, 14547297], [14548308, 14548488], [14549068, 14549208], [14551327, 14551472], [14552672, 14552818], [14552920, 14552987], [14554284, 14554365], [14555172, 14555318], [14555799, 14555986], [14558571, 14558721], [14559279, 14559405], [14561617, 14561786], [14561896, 14562044], [14563148, 14563294], [14564506, 14564582], [14565118, 14565205], [14565899, 14566045], [14566943, 14567079], [14567357, 14567438], [14581775, 14581881]]	None
ENST00000430219	[[14532677, 14535334], [14536350, 14536497], [14537924, 14538068], [14545073, 14545461], [14547122, 14547297], [14548308, 14548488], [14549068, 14549208], [14551327, 14551472], [14552672, 14552818], [14552920, 14552987], [14554284, 14554366]]	None
ENST00000507975	[[14535172, 14535334], [14536350, 14536497], [14537924, 14538068], [14545073, 14545179], [14547122, 14547297], [14548308, 14548488], [14549068, 14549208], [14551327, 14551472], [14552672, 14552818], [14552920, 14552987], [14554284, 14554365], [14555172, 14555318], [14555799, 14555986], [14558571, 14558721], [14559279, 14559405], [14561613, 14561786], [14561896, 14562044], [14563148, 14563294], [14564506, 14564582], [14565118, 14565205], [14565899, 14566045], [14566943, 14567079], [14567357, 14567438], [14581775, 14581897], [14583379, 14583588]]	None
ENST00000383795	[[14545412, 14545461], [14547122, 14547297], [14548308, 14548488], [14549068, 14549208], [14551327, 14551472], [14552672, 14552818], [14552920, 14552987], [14554284, 14554365], [14555172, 14555318], [14555799, 14555986], [14558571, 14558721], [14559279, 14559405], [14561613, 14561786], [14561896, 14562044], [14563148, 14563294], [14564506, 14564582], [14565118, 14565205], [14565899, 14566045], [14566943, 14567079], [14567357, 14567438], [14581775, 14581836]]	None
ENST00000422481	[[14562198, 14566045], [14566943, 14567079], [14567357, 14567490]]	None
ENST00000413414	[[14562198, 14565205], [14565899, 14566045], [14566943, 14567079], [14567357, 14567438], [14581775, 14581850]]	None
NM_001080423	[[14530618, 14535334], [14536350, 14536497], [14537924, 14538068], [14545073, 14545179], [14547122, 14547297], [14548308, 14548488], [14549068, 14549208], [14551327, 14551472], [14552672, 14552818], [14552920, 14552987], [14554284, 14554365], [14555172, 14555318], [14555799, 14555986], [14558571, 14558721], [14559279, 14559405], [14561617, 14561627], [14561629, 14561786], [14561896, 14562044], [14563148, 14563294], [14564506, 14564582], [14565118, 14565205], [14565899, 14566045], [14566943, 14567079], [14567357, 14567438], [14581775, 14581850]]	[[14535172, 14535334], [14536350, 14536497], [14537924, 14538068], [14545073, 14545179], [14547122, 14547297], [14548308, 14548488], [14549068, 14549208], [14551327, 14551472], [14552672, 14552818], [14552920, 14552987], [14554284, 14554365], [14555172, 14555318], [14555799, 14555986], [14558571, 14558721], [14559279, 14559405], [14561617, 14561627], [14561629, 14561786], [14561896, 14562044], [14563148, 14563294], [14564506, 14564582], [14565118, 14565205], [14565899, 14566045], [14566943, 14567079], [14567357, 14567438], [14581775, 14581815]]

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr3	GH03I014828	14828826	14828841	0.22	[{'connected_gene': 'C3orf20', 'score': 10.56}, {'connected_gene': 'GRIP2', 'score': 7.24}, {'connected_gene': 'PIR49239', 'score': 0.44}, {'connected_gene': 'FGD5', 'score': 0.37}, {'connected_gene': 'LOC105376963', 'score': 0.16}]
chr3	GH03I014634	14634834	14634983	0.31	[{'connected_gene': 'C3orf20', 'score': 10.81}, {'connected_gene': 'ENSG00000230172', 'score': 10.73}, {'connected_gene': 'PIR36019', 'score': 0.39}, {'connected_gene': 'LOC105376960', 'score': 0.29}, {'connected_gene': 'GRIP2', 'score': 0.29}]
chr3	GH03I014490	14490127	14490638	0.46	[{'connected_gene': 'GRIP2', 'score': 6.39}, {'connected_gene': 'TMEM43', 'score': 5.83}, {'connected_gene': 'GC03M014530', 'score': 0.26}, {'connected_gene': 'RNU6-905P', 'score': 0.26}, {'connected_gene': 'GC03P014432', 'score': 0.22}]
chr3	GH03I014521	14521063	14527116	1.12	[{'connected_gene': 'GRIP2', 'score': 24.99}, {'connected_gene': 'GC03M014530', 'score': 0.44}, {'connected_gene': 'RNU6-905P', 'score': 0.44}, {'connected_gene': 'GC03P014432', 'score': 0.16}]
chr3	GH03I014540	14540358	14540417	0.99	[{'connected_gene': 'GRIP2', 'score': 550.21}, {'connected_gene': 'GC03M014530', 'score': 0.44}, {'connected_gene': 'RNU6-905P', 'score': 0.44}, {'connected_gene': 'GC03P014564', 'score': 0.34}]
chr3	GH03I014508	14508788	14509680	0.95	[{'connected_gene': 'GRIP2', 'score': 26.66}, {'connected_gene': 'GC03M014530', 'score': 0.34}, {'connected_gene': 'RNU6-905P', 'score': 0.34}, {'connected_gene': 'GC03P014432', 'score': 0.18}]
chr3	GH03I014534	14534874	14535083	0.66	[{'connected_gene': 'GRIP2', 'score': 21.21}, {'connected_gene': 'GC03M014530', 'score': 0.77}, {'connected_gene': 'RNU6-905P', 'score': 0.77}, {'connected_gene': 'GC03P014564', 'score': 0.31}]
chr3	GH03I014627	14627194	14627383	0.57	[{'connected_gene': 'CCDC174', 'score': 11.42}, {'connected_gene': 'GRIP2', 'score': 0.34}, {'connected_gene': 'PIR36019', 'score': 0.34}, {'connected_gene': 'LOC105376960', 'score': 0.31}]
chr3	GH03I014494	14494350	14494590	0.31	[{'connected_gene': 'RNU6-905P', 'score': 11.58}, {'connected_gene': 'GC03M014530', 'score': 0.28}, {'connected_gene': 'GC03P014432', 'score': 0.21}, {'connected_gene': 'GRIP2', 'score': 0.14}]
chr3	GH03I014588	14588114	14588263	0.64	[{'connected_gene': 'LOC105376961', 'score': 0.44}, {'connected_gene': 'GRIP2', 'score': 0.39}, {'connected_gene': 'RHBDF1P1', 'score': 0.39}]
chr3	GH03I014601	14601934	14602063	0.56	[{'connected_gene': 'LOC105376960', 'score': 550.77}, {'connected_gene': 'GRIP2', 'score': 550.77}]
chr3	GH03I014245	14245996	14246239	0.34	[{'connected_gene': 'LINC01267', 'score': 11.14}, {'connected_gene': 'ENSG00000228242', 'score': 5.67}, {'connected_gene': 'VN1R20P', 'score': 4.46}, {'connected_gene': 'GRIP2', 'score': 3.1}, {'connected_gene': 'LOC105376958', 'score': 0.34}, {'connected_gene': 'ENSG00000255021', 'score': 0.22}]
chr3	GH03I014538	14538234	14538383	0.86	[{'connected_gene': 'VN1R20P', 'score': 10.43}, {'connected_gene': 'GC03M014530', 'score': 0.44}, {'connected_gene': 'RNU6-905P', 'score': 0.44}, {'connected_gene': 'GC03P014564', 'score': 0.31}, {'connected_gene': 'GRIP2', 'score': 0.21}]
chr3	GH03I014555	14555248	14556346	0.49	[{'connected_gene': 'GC03P014564', 'score': 0.44}, {'connected_gene': 'GC03M014530', 'score': 0.34}, {'connected_gene': 'RNU6-905P', 'score': 0.34}, {'connected_gene': 'GRIP2', 'score': 0.25}]
chr3	GH03I014529	14529596	14530869	0.31	[{'connected_gene': 'GC03M014530', 'score': 550.77}, {'connected_gene': 'RNU6-905P', 'score': 550.77}, {'connected_gene': 'GRIP2', 'score': 27.76}, {'connected_gene': 'GC03P014432', 'score': 0.15}]
chr3	GH03I014542	14542988	14544321	0.57	[{'connected_gene': 'GC03M014530', 'score': 0.39}, {'connected_gene': 'RNU6-905P', 'score': 0.39}, {'connected_gene': 'GC03P014564', 'score': 0.34}, {'connected_gene': 'GRIP2', 'score': 0.22}]
chr3	GH03I014531	14531995	14534019	0.89	[{'connected_gene': 'GC03M014530', 'score': 550.77}, {'connected_gene': 'RNU6-905P', 'score': 550.77}, {'connected_gene': 'GRIP2', 'score': 21.62}, {'connected_gene': 'GC03P014564', 'score': 0.29}]
chr3	GH03I014550	14550475	14551479	0.31	[{'connected_gene': 'GC03P014564', 'score': 0.39}, {'connected_gene': 'GC03M014530', 'score': 0.37}, {'connected_gene': 'RNU6-905P', 'score': 0.37}, {'connected_gene': 'GRIP2', 'score': 0.23}]
chr3	GH03I014489	14489298	14490010	0.31	[{'connected_gene': 'GC03M014530', 'score': 0.26}, {'connected_gene': 'RNU6-905P', 'score': 0.26}, {'connected_gene': 'GC03P014432', 'score': 0.22}, {'connected_gene': 'SLC6A6', 'score': 0.17}, {'connected_gene': 'GRIP2', 'score': 0.14}]
chr3	GH03I014635	14635054	14635203	0.49	[{'connected_gene': 'ENSG00000230172', 'score': 10.59}, {'connected_gene': 'PIR36019', 'score': 0.39}, {'connected_gene': 'LOC105376960', 'score': 0.29}, {'connected_gene': 'GRIP2', 'score': 0.29}]