PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000370944	[[70726270, 70728530], [70736538, 70736639], [70740402, 70740501], [70742447, 70742527], [70758070, 70758232], [70761812, 70761944], [70766446, 70766591], [70771906, 70771973], [70779427, 70779473], [70781163, 70781249], [70790535, 70790640], [70801740, 70801782], [70819661, 70820405]]	[[70728399, 70728530], [70736538, 70736639], [70740402, 70740501], [70742447, 70742527], [70758070, 70758232], [70761812, 70761944], [70766446, 70766591], [70771906, 70771973], [70779427, 70779473], [70781163, 70781249], [70790535, 70790640], [70801740, 70801782], [70819661, 70820091]]
ENST00000262346	[[70726919, 70728530], [70736538, 70736639], [70740402, 70740501], [70742447, 70742527], [70758070, 70758232], [70761812, 70761944], [70766446, 70766591], [70771906, 70771973], [70779427, 70779473], [70781163, 70781249], [70801740, 70801782], [70819661, 70820417]]	[[70728399, 70728530], [70736538, 70736639], [70740402, 70740501], [70742447, 70742527], [70758070, 70758232], [70761812, 70761944], [70766446, 70766591], [70771906, 70771973], [70779427, 70779473], [70781163, 70781249], [70801740, 70801782], [70819661, 70820091]]
ENST00000490846	[[70757828, 70758232], [70761812, 70761944], [70766446, 70766591], [70771906, 70771973], [70779427, 70779473]]	None
ENST00000498735	[[70771368, 70771640], [70771906, 70771973], [70781163, 70781249], [70790535, 70790640]]	None
ENST00000464236	[[70727956, 70728486], [70736538, 70736639], [70740402, 70740501], [70742447, 70742526]]	None
NM_030816	[[70724684, 70728530], [70736538, 70736639], [70740402, 70740501], [70742447, 70742527], [70758070, 70758232], [70761812, 70761944], [70766446, 70766591], [70771906, 70771973], [70779427, 70779473], [70781163, 70781249], [70790535, 70790640], [70801740, 70801782], [70819661, 70820417]]	[[70728399, 70728530], [70736538, 70736639], [70740402, 70740501], [70742447, 70742527], [70758070, 70758232], [70761812, 70761944], [70766446, 70766591], [70771906, 70771973], [70779427, 70779473], [70781163, 70781249], [70790535, 70790640], [70801740, 70801782], [70819661, 70820091]]

Promoter

Chrom	Start	End	Description
chr1	70820335	70820346	CAGE_peak_2_at_ANKRD13C_5end
chr1	70820357	70820435	CAGE_peak_1_at_ANKRD13C_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr1	GH01I070281	70281143	70281357	0.57	[{'connected_gene': 'SRSF11', 'score': 11.26}, {'connected_gene': 'ANKRD13C', 'score': 1.31}, {'connected_gene': 'GC01M070275', 'score': 0.39}, {'connected_gene': 'GC01P070230', 'score': 0.23}]
chr1	GH01I070340	70340930	70341291	0.34	[{'connected_gene': 'ANKRD13C', 'score': 0.39}, {'connected_gene': 'GC01M070275', 'score': 0.26}]
chr1	GH01I070226	70226238	70226598	0.58	[{'connected_gene': 'LRRC40', 'score': 15.13}, {'connected_gene': 'SRSF11', 'score': 13.95}, {'connected_gene': 'ANKRD13C', 'score': 3.98}, {'connected_gene': 'GC01P070230', 'score': 0.77}, {'connected_gene': 'ENSG00000228988', 'score': 0.44}]
chr1	GH01I070504	70504478	70505087	1.1	[{'connected_gene': 'LRRC40', 'score': 11.83}, {'connected_gene': 'ANKRD13C', 'score': 10.98}, {'connected_gene': 'GC01M070501', 'score': 0.44}, {'connected_gene': 'GC01M070486', 'score': 0.37}]
chr1	GH01I070328	70328518	70328667	0.43	[{'connected_gene': 'LRRC40', 'score': 4.98}, {'connected_gene': 'ANKRD13C', 'score': 0.31}, {'connected_gene': 'GC01M070275', 'score': 0.29}]
chr1	GH01I070409	70409496	70412968	2.3	[{'connected_gene': 'CTH', 'score': 565.78}, {'connected_gene': 'SRSF11', 'score': 23.69}, {'connected_gene': 'HHLA3', 'score': 21.1}, {'connected_gene': 'ZRANB2', 'score': 17.41}, {'connected_gene': 'ANKRD13C', 'score': 17.37}, {'connected_gene': 'ENSG00000278636', 'score': 0.37}]
chr1	GH01I070352	70352378	70355999	2.1	[{'connected_gene': 'HHLA3', 'score': 570.22}, {'connected_gene': 'ANKRD13C', 'score': 561.37}, {'connected_gene': 'LRRC40', 'score': 4.18}, {'connected_gene': 'LOC102724548', 'score': 0.44}, {'connected_gene': 'GC01M070275', 'score': 0.22}]
chr1	GH01I070319	70319128	70321085	0.43	[{'connected_gene': 'HHLA3', 'score': 10.76}, {'connected_gene': 'GC01M070275', 'score': 0.34}, {'connected_gene': 'ANKRD13C', 'score': 0.29}]
chr1	GH01I070284	70284115	70285174	0.31	[{'connected_gene': 'HHLA3', 'score': 6.2}, {'connected_gene': 'GC01M070275', 'score': 0.39}, {'connected_gene': 'GC01P070230', 'score': 0.23}, {'connected_gene': 'ANKRD13C', 'score': 0.19}]
chr1	GH01I070264	70264878	70265027	0.46	[{'connected_gene': 'GC01P070230', 'score': 0.29}, {'connected_gene': 'GC01M070275', 'score': 0.29}, {'connected_gene': 'ANKRD13C', 'score': 0.17}]