PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000538056	[[49822046, 49822255], [49823006, 49823101], [49829974, 49830049], [49833481, 49833659], [49840014, 49840046]]	[[49822173, 49822255], [49823006, 49823101], [49829974, 49830049], [49833481, 49833659], [49840014, 49840046]]
ENST00000251108	[[49822060, 49822255], [49823006, 49823101], [49829974, 49830049], [49833481, 49833659], [49841625, 49842195], [49848426, 49848476], [49852485, 49852655], [49854644, 49854834], [49860357, 49860418], [49865819, 49867618]]	[[49822173, 49822255], [49823006, 49823101], [49829974, 49830049], [49833481, 49833659], [49841625, 49842195], [49848426, 49848476], [49852485, 49852655], [49854644, 49854834], [49860357, 49860418], [49865819, 49865893]]
ENST00000496952	[[49822071, 49822605], [49823006, 49823101], [49829974, 49830051]]	None
ENST00000496061	[[49822076, 49822255], [49823006, 49823101], [49829974, 49830049], [49833481, 49833659], [49840014, 49840139], [49841625, 49841661]]	[[49822173, 49822255], [49823006, 49823101], [49829974, 49830049], [49833481, 49833659], [49840014, 49840046]]
ENST00000466868	[[49822082, 49822255], [49823006, 49823101], [49829974, 49830049], [49833621, 49833659], [49841625, 49841921]]	None
ENST00000444959	[[49822082, 49822255], [49823006, 49823101], [49829974, 49830049], [49841625, 49842195], [49848426, 49848476], [49852485, 49852655], [49854644, 49854834], [49860357, 49860418], [49865819, 49866333]]	[[49841789, 49842195], [49848426, 49848476], [49852485, 49852655], [49854644, 49854834], [49860357, 49860418], [49865819, 49865893]]
ENST00000484126	[[49822112, 49822255], [49823006, 49823101], [49829974, 49830049], [49833621, 49833659], [49840014, 49840139], [49841625, 49841793]]	[[49822173, 49822255], [49823006, 49823101], [49829974, 49830049], [49833621, 49833659], [49840014, 49840033]]
ENST00000429346	[[49822183, 49822255], [49823006, 49823101], [49829974, 49830049], [49840014, 49840062]]	[[49822183, 49822255], [49823006, 49823101], [49829974, 49830049], [49840014, 49840062]]
NR_036439	[[49822046, 49822255], [49823006, 49823101], [49829974, 49830049], [49841625, 49842195], [49848426, 49848476], [49852485, 49852655], [49854644, 49854834], [49860357, 49860418], [49865819, 49867622]]	None
NM_001193478	[[49822046, 49822255], [49823006, 49823101], [49829974, 49830049], [49833481, 49833659], [49841625, 49842195], [49848426, 49848476], [49852485, 49852655], [49854644, 49854834], [49860357, 49860418], [49866913, 49867622]]	[[49822173, 49822255], [49823006, 49823101], [49829974, 49830049], [49833481, 49833659], [49841625, 49842195], [49848426, 49848476], [49852485, 49852655], [49854644, 49854834], [49860357, 49860418], [49866913, 49866918]]
NM_030911	[[49822046, 49822255], [49823006, 49823101], [49829974, 49830049], [49833481, 49833659], [49841625, 49842195], [49848426, 49848476], [49852485, 49852655], [49854644, 49854834], [49860357, 49860418], [49865819, 49867622]]	[[49822173, 49822255], [49823006, 49823101], [49829974, 49830049], [49833481, 49833659], [49841625, 49842195], [49848426, 49848476], [49852485, 49852655], [49854644, 49854834], [49860357, 49860418], [49865819, 49865893]]

Promoter

Chrom	Start	End	Description
chr13	49822041	49822086	CAGE_peak_1_at_CDADC1_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr13	GH13I049292	49292345	49293390	0.84	[{'connected_gene': 'SETDB2', 'score': 29.13}, {'connected_gene': 'TRIM13', 'score': 10.91}, {'connected_gene': 'CDADC1', 'score': 10.63}, {'connected_gene': 'CAB39L', 'score': 4.29}, {'connected_gene': 'GC13P049296', 'score': 0.77}, {'connected_gene': 'GC13M049248', 'score': 0.26}]
chr13	GH13I049059	49059997	49060966	0.52	[{'connected_gene': 'CDADC1', 'score': 5.01}, {'connected_gene': 'RAD17P2', 'score': 0.39}, {'connected_gene': 'GC13P049077', 'score': 0.37}, {'connected_gene': 'FNDC3A', 'score': 0.18}]
chr13	GH13I049302	49302361	49303326	0.2	[{'connected_gene': 'CDADC1', 'score': 10.51}, {'connected_gene': 'CAB39L', 'score': 8.61}, {'connected_gene': 'GC13P049296', 'score': 0.44}, {'connected_gene': 'GC13P049390', 'score': 0.17}]
chr13	GH13I049303	49303625	49304167	0.83	[{'connected_gene': 'CDADC1', 'score': 10.5}, {'connected_gene': 'CAB39L', 'score': 8.61}, {'connected_gene': 'GC13P049296', 'score': 0.44}, {'connected_gene': 'GC13P049390', 'score': 0.17}]
chr13	GH13I049319	49319317	49321731	0.51	[{'connected_gene': 'CDADC1', 'score': 10.04}, {'connected_gene': 'GC13P049296', 'score': 0.34}, {'connected_gene': 'GC13P049390', 'score': 0.2}, {'connected_gene': 'CAB39L', 'score': 0.13}]
chr13	GH13I049309	49309847	49310477	0.2	[{'connected_gene': 'CDADC1', 'score': 10.31}, {'connected_gene': 'GC13P049296', 'score': 0.39}, {'connected_gene': 'GC13P049390', 'score': 0.18}, {'connected_gene': 'CAB39L', 'score': 0.12}]
chr13	GH13I049277	49277785	49278750	0.31	[{'connected_gene': 'CDADC1', 'score': 23.24}, {'connected_gene': 'MLNR', 'score': 12.95}, {'connected_gene': 'CAB39L', 'score': 8.47}, {'connected_gene': 'GC13P049296', 'score': 0.37}, {'connected_gene': 'GC13M049248', 'score': 0.31}]
chr13	GH13I049247	49247141	49249422	2.21	[{'connected_gene': 'CDADC1', 'score': 550.77}, {'connected_gene': 'LOC105370203', 'score': 550.77}, {'connected_gene': 'CAB39L', 'score': 8.83}, {'connected_gene': 'GC13M049248', 'score': 0.77}, {'connected_gene': 'GC13M049249', 'score': 0.77}]
chr13	GH13I049257	49257601	49258950	0.6	[{'connected_gene': 'MLNR', 'score': 11.93}, {'connected_gene': 'CAB39L', 'score': 8.44}, {'connected_gene': 'GC13M049248', 'score': 0.44}, {'connected_gene': 'CDADC1', 'score': 0.39}, {'connected_gene': 'GC13P049296', 'score': 0.28}]
chr13	GH13I049264	49264856	49266721	0.31	[{'connected_gene': 'MLNR', 'score': 12.26}, {'connected_gene': 'CDADC1', 'score': 10.73}, {'connected_gene': 'GC13M049248', 'score': 0.39}, {'connected_gene': 'GC13P049296', 'score': 0.29}]
chr13	GH13I049252	49252617	49255310	0.38	[{'connected_gene': 'MLNR', 'score': 11.94}, {'connected_gene': 'GC13M049248', 'score': 0.77}, {'connected_gene': 'CDADC1', 'score': 0.44}, {'connected_gene': 'GC13P049296', 'score': 0.26}]
chr13	GH13I049298	49298980	49299954	0.49	[{'connected_gene': 'MLNR', 'score': 11.28}, {'connected_gene': 'PHF11', 'score': 10.76}, {'connected_gene': 'CDADC1', 'score': 10.5}, {'connected_gene': 'GC13P049296', 'score': 0.77}, {'connected_gene': 'GC13P049390', 'score': 0.16}]
chr13	GH13I048974	48974590	48980813	2.05	[{'connected_gene': 'FNDC3A', 'score': 556.62}, {'connected_gene': 'ENSG00000275202', 'score': 550.77}, {'connected_gene': 'GC13M048972', 'score': 550.77}, {'connected_gene': 'CDADC1', 'score': 5.62}, {'connected_gene': 'GC13P048988', 'score': 0.39}]
chr13	GH13I049295	49295098	49296024	0.2	[{'connected_gene': 'GC13P049296', 'score': 550.77}, {'connected_gene': 'CDADC1', 'score': 10.33}, {'connected_gene': 'CAB39L', 'score': 9.24}, {'connected_gene': 'GC13M049248', 'score': 0.26}]
chr13	GH13I048988	48988905	48989197	0.26	[{'connected_gene': 'GC13P048988', 'score': 550.77}, {'connected_gene': 'RNU6-60P', 'score': 550.77}, {'connected_gene': 'FNDC3A', 'score': 4.86}, {'connected_gene': 'SETDB2', 'score': 4.08}, {'connected_gene': 'CYSLTR2', 'score': 1.8}, {'connected_gene': 'CDADC1', 'score': 1.71}, {'connected_gene': 'RCBTB2', 'score': 1.57}, {'connected_gene': 'RAD17P2', 'score': 0.22}]