PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000375991	[[88879460, 88881106], [88886921, 88887027], [88889103, 88889157], [88897292, 88897444]]	[[88880957, 88881106], [88886921, 88887027], [88889103, 88889157], [88897292, 88897373]]
ENST00000452279	[[88880487, 88881106], [88886921, 88887027], [88889103, 88889157], [88897292, 88897676]]	[[88880957, 88881106], [88886921, 88887027], [88889103, 88889157], [88897292, 88897514]]
ENST00000311534	[[88880593, 88881106], [88886921, 88887027], [88889103, 88889157], [88896883, 88897023]]	[[88880957, 88881053]]
ENST00000326094	[[88881777, 88882720], [88886921, 88887027], [88889103, 88889157], [88897292, 88897453]]	[[88882700, 88882720], [88886921, 88887027], [88889103, 88889157], [88897292, 88897373]]
NM_030940	[[88879460, 88881106], [88886921, 88887027], [88889103, 88889157], [88897292, 88897490]]	[[88880957, 88881106], [88886921, 88887027], [88889103, 88889157], [88897292, 88897373]]

Promoter

Chrom	Start	End	Description
chr9	88896977	88897013	CAGE_peak_2_at_ISCA1_5end
chr9	88897406	88897413	CAGE_peak_4_at_ISCA1_5end
chr9	88897426	88897497	CAGE_peak_1_at_ISCA1_5end,CAGE_peak_2_at_GOLM1_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr9	GH09I086280	86280960	86283758	2.07	[{'connected_gene': 'ISCA1', 'score': 550.77}, {'connected_gene': 'C9orf153', 'score': 28.8}, {'connected_gene': 'GAS1RR', 'score': 11.28}, {'connected_gene': 'RN7SKP264', 'score': 11.23}, {'connected_gene': 'LOC389765', 'score': 10.09}, {'connected_gene': 'LOC100130049', 'score': 9.99}, {'connected_gene': 'GAS1', 'score': 9.83}, {'connected_gene': 'ZCCHC6', 'score': 6.06}]
chr9	GH09I086286	86286606	86286721	0.64	[{'connected_gene': 'ISCA1', 'score': 0.77}, {'connected_gene': 'GC09M086340', 'score': 0.23}]
chr9	GH09I086303	86303088	86304494	0.57	[{'connected_gene': 'ZCCHC6', 'score': 6.36}, {'connected_gene': 'ISCA1', 'score': 0.34}, {'connected_gene': 'GC09M086340', 'score': 0.28}]
chr9	GH09I086337	86337066	86341078	0.95	[{'connected_gene': 'ZCCHC6', 'score': 7.58}, {'connected_gene': 'C9orf153', 'score': 5.36}, {'connected_gene': 'GC09M086340', 'score': 0.77}, {'connected_gene': 'ISCA1', 'score': 0.22}]
chr9	GH09I086284	86284553	86285855	0.66	[{'connected_gene': 'ZCCHC6', 'score': 6.13}, {'connected_gene': 'C9orf153', 'score': 4.66}, {'connected_gene': 'ISCA1', 'score': 0.77}, {'connected_gene': 'GC09M086340', 'score': 0.22}]
chr9	GH09I086287	86287001	86287441	0.98	[{'connected_gene': 'C9orf153', 'score': 19.67}, {'connected_gene': 'ISCA1', 'score': 0.77}, {'connected_gene': 'GC09M086340', 'score': 0.23}]
chr9	GH09I086322	86322676	86324675	0.46	[{'connected_gene': 'C9orf153', 'score': 19.89}, {'connected_gene': 'ZCCHC6', 'score': 6.19}, {'connected_gene': 'GC09M086340', 'score': 0.37}, {'connected_gene': 'ISCA1', 'score': 0.26}]
chr9	GH09I086320	86320920	86322224	0.38	[{'connected_gene': 'C9orf153', 'score': 19.57}, {'connected_gene': 'ZCCHC6', 'score': 7.31}, {'connected_gene': 'GC09M086340', 'score': 0.37}, {'connected_gene': 'ISCA1', 'score': 0.28}]
chr9	GH09I086259	86259647	86259706	0.5	[{'connected_gene': 'C9orf153', 'score': 550.77}, {'connected_gene': 'RN7SKP264', 'score': 550.77}, {'connected_gene': 'ISCA1', 'score': 0.34}]