PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000562435	[[47111613, 47117712], [47120136, 47120250], [47143393, 47143622], [47156567, 47156695], [47156778, 47156823], [47162235, 47162484], [47163134, 47163275], [47165879, 47165936], [47177489, 47177908]]	[[47117131, 47117712], [47120136, 47120250], [47143393, 47143622], [47156567, 47156695], [47156778, 47156823], [47162235, 47162484], [47163134, 47163275], [47165879, 47165936], [47177489, 47177523]]
ENST00000303155	[[47115544, 47117712], [47120136, 47120250], [47143393, 47143622], [47156567, 47156695], [47156799, 47156823], [47162235, 47162484], [47163134, 47163275], [47165879, 47165936], [47177489, 47177620]]	[[47117131, 47117712], [47120136, 47120250], [47143393, 47143622], [47156567, 47156695], [47156799, 47156823], [47162235, 47162484], [47163134, 47163275], [47165879, 47165936], [47177489, 47177523]]
ENST00000562559	[[47116900, 47117712], [47143393, 47143622], [47156567, 47156695], [47156799, 47156823], [47162235, 47162369]]	[[47117131, 47117712], [47143393, 47143622], [47156567, 47156695], [47156799, 47156823], [47162235, 47162369]]
ENST00000564667	[[47117017, 47117712], [47143441, 47143545]]	[[47117131, 47117712], [47143441, 47143545]]
ENST00000563078	[[47117524, 47117712], [47143393, 47143622], [47156567, 47156695], [47156778, 47156814]]	[[47117524, 47117712], [47143393, 47143622], [47156567, 47156695], [47156778, 47156814]]
NM_018092	[[47115430, 47117712], [47120136, 47120250], [47143393, 47143622], [47156567, 47156695], [47156778, 47156823], [47162235, 47162484], [47163134, 47163275], [47165879, 47165936], [47177489, 47177936]]	[[47117131, 47117712], [47120136, 47120250], [47143393, 47143622], [47156567, 47156695], [47156778, 47156823], [47162235, 47162484], [47163134, 47163275], [47165879, 47165936], [47177489, 47177523]]
NM_001201477	[[47115430, 47117712], [47120136, 47120250], [47143393, 47143622], [47156567, 47156695], [47156799, 47156823], [47162235, 47162484], [47163134, 47163275], [47165879, 47165936], [47177489, 47177936]]	[[47117131, 47117712], [47120136, 47120250], [47143393, 47143622], [47156567, 47156695], [47156799, 47156823], [47162235, 47162484], [47163134, 47163275], [47165879, 47165936], [47177489, 47177523]]

Promoter

Chrom	Start	End	Description
chr16	47177845	47177864	CAGE_peak_1_at_NETO2_5end
chr16	47177874	47177922	CAGE_peak_2_at_NETO2_5end
chr16	47177926	47177939	CAGE_peak_3_at_NETO2_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr16	GH16I048117	48117570	48117739	0.75	[{'connected_gene': 'ABCC12', 'score': 11.44}, {'connected_gene': 'NETO2', 'score': 10.8}, {'connected_gene': 'ENSG00000261017', 'score': 0.22}]
chr16	GH16I048053	48053198	48055400	0.87	[{'connected_gene': 'NETO2', 'score': 11.59}, {'connected_gene': 'LONP2', 'score': 6.03}, {'connected_gene': 'ENSG00000261017', 'score': 0.44}, {'connected_gene': 'LINC02134', 'score': 0.17}]
chr16	GH16I046960	46960269	46960478	0.31	[{'connected_gene': 'NETO2', 'score': 10.49}, {'connected_gene': 'DNAJA2', 'score': 0.39}, {'connected_gene': 'GC16M046921', 'score': 0.28}]
chr16	GH16I046961	46961396	46962498	0.63	[{'connected_gene': 'NETO2', 'score': 10.49}, {'connected_gene': 'DNAJA2', 'score': 0.39}, {'connected_gene': 'GC16M046921', 'score': 0.28}]
chr16	GH16I047141	47141201	47144801	2.48	[{'connected_gene': 'NETO2', 'score': 552.87}, {'connected_gene': 'ITFG1-AS1', 'score': 550.77}, {'connected_gene': 'ENSG00000261173', 'score': 4.1}, {'connected_gene': 'GC16P047117', 'score': 0.31}]
chr16	GH16I047139	47139429	47140345	0.49	[{'connected_gene': 'NETO2', 'score': 0.77}, {'connected_gene': 'GC16P047117', 'score': 0.34}]
chr16	GH16I047135	47135588	47139136	0.89	[{'connected_gene': 'NETO2', 'score': 0.44}, {'connected_gene': 'GC16P047117', 'score': 0.37}]
chr16	GH16I047091	47091849	47092045	0.22	[{'connected_gene': 'GC16M047059', 'score': 0.34}, {'connected_gene': 'GC16P047117', 'score': 0.31}, {'connected_gene': 'NETO2', 'score': 0.23}]
chr16	GH16I047079	47079990	47080139	0.31	[{'connected_gene': 'GC16M047059', 'score': 0.39}, {'connected_gene': 'GC16P047117', 'score': 0.28}, {'connected_gene': 'NETO2', 'score': 0.21}]