PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000381077	[[6966960, 6968513], [6995260, 6995490], [7023660, 7023879], [7066093, 7066231]]	[[6968336, 6968513], [6995260, 6995490], [7023660, 7023879], [7066093, 7066154]]
ENST00000412827	[[6967558, 6968513], [6995260, 6995490], [7023789, 7023879], [7066093, 7066194]]	[[6968336, 6968513], [6995260, 6995490], [7023789, 7023879], [7066093, 7066154]]
ENST00000424830	[[6967803, 6968513], [6995260, 6995490], [7023660, 7023879], [7035006, 7035075], [7066093, 7066199]]	[[6968336, 6968513], [6995260, 6995490], [7023660, 7023879], [7035006, 7035075], [7066093, 7066154]]
ENST00000540122	[[6975626, 6975864], [6995260, 6995490], [7023660, 7023879], [7066093, 7066231]]	[[6975747, 6975864], [6995260, 6995490], [7023660, 7023879], [7066093, 7066154]]
ENST00000486446	[[6975800, 6975864], [6995260, 6995490], [7023660, 7023879], [7066093, 7066166]]	[[6975800, 6975864], [6995260, 6995490], [7023660, 7023879], [7066093, 7066154]]
ENST00000498474	[[7002791, 7003512], [7023660, 7023879], [7066093, 7066193]]	None
NM_001135565	[[6966960, 6968513], [6995260, 6995490], [7023660, 7023879], [7035006, 7035075], [7066093, 7066231]]	[[6968336, 6968513], [6995260, 6995490], [7023660, 7023879], [7035006, 7035075], [7066093, 7066154]]
NM_012080	[[6966960, 6968513], [6995260, 6995490], [7023660, 7023879], [7066093, 7066231]]	[[6968336, 6968513], [6995260, 6995490], [7023660, 7023879], [7066093, 7066154]]
NM_001178136	[[6966960, 6968513], [6995260, 6995490], [7023789, 7023879], [7066093, 7066231]]	[[6968336, 6968513], [6995260, 6995490], [7023789, 7023879], [7066093, 7066154]]
NM_001178135	[[6975626, 6975864], [6995260, 6995490], [7023660, 7023879], [7066093, 7066231]]	[[6975747, 6975864], [6995260, 6995490], [7023660, 7023879], [7066093, 7066154]]

Promoter

Chrom	Start	End	Description
chrX	7066159	7066207	CAGE_peak_1_at_HDHD1_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chrX	GH0XI007152	7152915	7154595	0.43	[{'connected_gene': 'PUDP', 'score': 10.82}, {'connected_gene': 'STS', 'score': 0.44}, {'connected_gene': 'GC0XP007191', 'score': 0.28}, {'connected_gene': 'GC0XP007190', 'score': 0.28}]
chrX	GH0XI007251	7251401	7251600	0.2	[{'connected_gene': 'PUDP', 'score': 7.13}, {'connected_gene': 'STS', 'score': 6.34}, {'connected_gene': 'GC0XP007237', 'score': 0.39}, {'connected_gene': 'ENSG00000279682', 'score': 0.07}]
chrX	GH0XI007082	7082745	7084799	1.17	[{'connected_gene': 'PUDP', 'score': 8.36}, {'connected_gene': 'STS', 'score': 4.9}, {'connected_gene': 'ENSG00000228550', 'score': 0.31}, {'connected_gene': 'GC0XP007028', 'score': 0.22}]
chrX	GH0XI007158	7158991	7159872	0.69	[{'connected_gene': 'PUDP', 'score': 7.99}, {'connected_gene': 'STS', 'score': 0.39}, {'connected_gene': 'GC0XP007191', 'score': 0.29}, {'connected_gene': 'GC0XP007190', 'score': 0.29}]
chrX	GH0XI007096	7096666	7097485	0.2	[{'connected_gene': 'PUDP', 'score': 8.39}, {'connected_gene': 'STS', 'score': 5.91}, {'connected_gene': 'ENSG00000228550', 'score': 0.37}, {'connected_gene': 'GC0XP007028', 'score': 0.2}]
chrX	GH0XI007261	7261601	7262200	0.97	[{'connected_gene': 'PUDP', 'score': 4.43}, {'connected_gene': 'GC0XP007237', 'score': 0.34}, {'connected_gene': 'STS', 'score': 0.13}, {'connected_gene': 'ENSG00000279682', 'score': 0.07}]
chrX	GH0XI007144	7144401	7144600	0.58	[{'connected_gene': 'PUDP', 'score': 0.77}, {'connected_gene': 'STS', 'score': 0.77}, {'connected_gene': 'GC0XM007135', 'score': 0.44}]
chrX	GH0XI007252	7252001	7253351	0.58	[{'connected_gene': 'PUDP', 'score': 10.65}, {'connected_gene': 'GC0XP007237', 'score': 0.37}, {'connected_gene': 'STS', 'score': 0.14}, {'connected_gene': 'ENSG00000279682', 'score': 0.07}]
chrX	GH0XI007198	7198080	7198961	0.2	[{'connected_gene': 'PUDP', 'score': 7.83}, {'connected_gene': 'GC0XP007191', 'score': 0.44}, {'connected_gene': 'GC0XP007190', 'score': 0.44}, {'connected_gene': 'GC0XP007237', 'score': 0.28}, {'connected_gene': 'STS', 'score': 0.23}]
chrX	GH0XI007317	7317830	7318943	0.31	[{'connected_gene': 'PUDP', 'score': 4.52}, {'connected_gene': 'GC0XP007237', 'score': 0.18}, {'connected_gene': 'ENSG00000279682', 'score': 0.09}, {'connected_gene': 'STS', 'score': 0.09}]
chrX	GH0XI006958	6958630	6959527	0.31	[{'connected_gene': 'PUDP', 'score': 8.0}, {'connected_gene': 'GC0XP006948', 'score': 0.39}, {'connected_gene': 'RPS27AP17', 'score': 0.29}]
chrX	GH0XI007145	7145401	7149220	2.35	[{'connected_gene': 'PUDP', 'score': 559.12}, {'connected_gene': 'MIR4767', 'score': 550.77}, {'connected_gene': 'STS', 'score': 550.77}]
chrX	GH0XI007108	7108142	7111949	1.21	[{'connected_gene': 'PUDP', 'score': 11.05}, {'connected_gene': 'ENSG00000228550', 'score': 0.77}, {'connected_gene': 'GC0XP007028', 'score': 0.18}]
chrX	GH0XI007059	7059020	7060472	0.93	[{'connected_gene': 'PUDP', 'score': 11.1}, {'connected_gene': 'GC0XP007028', 'score': 0.29}, {'connected_gene': 'ENSG00000228550', 'score': 0.23}]
chrX	GH0XI007089	7089080	7089249	0.74	[{'connected_gene': 'PUDP', 'score': 8.26}, {'connected_gene': 'ENSG00000228550', 'score': 0.34}, {'connected_gene': 'GC0XP007028', 'score': 0.21}]
chrX	GH0XI007119	7119734	7122117	1.16	[{'connected_gene': 'PUDP', 'score': 11.61}, {'connected_gene': 'ENSG00000228550', 'score': 0.44}, {'connected_gene': 'GC0XM007135', 'score': 0.37}]
chrX	GH0XI007057	7057535	7058343	0.2	[{'connected_gene': 'PUDP', 'score': 11.09}, {'connected_gene': 'GC0XP007028', 'score': 0.31}, {'connected_gene': 'ENSG00000228550', 'score': 0.22}]
chrX	GH0XI007106	7106611	7107700	0.2	[{'connected_gene': 'PUDP', 'score': 11.25}, {'connected_gene': 'ENSG00000228550', 'score': 0.44}, {'connected_gene': 'GC0XP007028', 'score': 0.18}]
chrX	GH0XI007070	7070761	7072814	0.52	[{'connected_gene': 'PUDP', 'score': 11.02}, {'connected_gene': 'ENSG00000228550', 'score': 0.26}, {'connected_gene': 'GC0XP007028', 'score': 0.26}]
chrX	GH0XI007078	7078525	7080903	0.2	[{'connected_gene': 'PUDP', 'score': 11.44}, {'connected_gene': 'ENSG00000228550', 'score': 0.29}, {'connected_gene': 'GC0XP007028', 'score': 0.23}]
chrX	GH0XI007051	7051425	7053537	0.2	[{'connected_gene': 'PUDP', 'score': 8.19}, {'connected_gene': 'GC0XP007028', 'score': 0.34}, {'connected_gene': 'ENSG00000228550', 'score': 0.21}]
chrX	GH0XI007117	7117647	7117909	0.88	[{'connected_gene': 'PUDP', 'score': 1.75}, {'connected_gene': 'ENSG00000228550', 'score': 0.77}, {'connected_gene': 'GC0XM007135', 'score': 0.34}]
chrX	GH0XI007118	7118610	7119609	0.2	[{'connected_gene': 'PUDP', 'score': 8.35}, {'connected_gene': 'ENSG00000228550', 'score': 0.44}, {'connected_gene': 'GC0XM007135', 'score': 0.37}]
chrX	GH0XI007043	7043800	7045503	0.6	[{'connected_gene': 'PUDP', 'score': 11.01}, {'connected_gene': 'GC0XP007028', 'score': 0.37}, {'connected_gene': 'ENSG00000228550', 'score': 0.2}]
chrX	GH0XI007085	7085801	7086928	1.02	[{'connected_gene': 'PUDP', 'score': 11.2}, {'connected_gene': 'ENSG00000228550', 'score': 0.31}, {'connected_gene': 'GC0XP007028', 'score': 0.22}]
chrX	GH0XI007048	7048886	7049594	0.31	[{'connected_gene': 'PUDP', 'score': 11.01}, {'connected_gene': 'GC0XP007028', 'score': 0.34}, {'connected_gene': 'ENSG00000228550', 'score': 0.21}]
chrX	GH0XI007061	7061683	7067865	0.59	[{'connected_gene': 'PUDP', 'score': 11.61}, {'connected_gene': 'GC0XP007028', 'score': 0.28}, {'connected_gene': 'ENSG00000228550', 'score': 0.25}]
chrX	GH0XI007054	7054640	7056742	0.76	[{'connected_gene': 'PUDP', 'score': 8.33}, {'connected_gene': 'GC0XP007028', 'score': 0.31}, {'connected_gene': 'ENSG00000228550', 'score': 0.22}]
chrX	GH0XI007099	7099312	7100597	0.2	[{'connected_gene': 'PUDP', 'score': 11.51}, {'connected_gene': 'ENSG00000228550', 'score': 0.39}, {'connected_gene': 'GC0XP007028', 'score': 0.19}]
chrX	GH0XI006930	6930125	6930772	0.31	[{'connected_gene': 'PUDP', 'score': 7.78}, {'connected_gene': 'GC0XP006948', 'score': 0.37}, {'connected_gene': 'ENSG00000231217', 'score': 0.08}]
chrX	GH0XI007073	7073393	7075416	0.63	[{'connected_gene': 'PUDP', 'score': 11.12}, {'connected_gene': 'ENSG00000228550', 'score': 0.28}, {'connected_gene': 'GC0XP007028', 'score': 0.25}]
chrX	GH0XI007131	7131454	7133962	1.29	[{'connected_gene': 'PUDP', 'score': 11.68}, {'connected_gene': 'GC0XM007135', 'score': 0.44}, {'connected_gene': 'ENSG00000228550', 'score': 0.37}]
chrX	GH0XI007218	7218795	7220480	1.06	[{'connected_gene': 'STS', 'score': 550.19}, {'connected_gene': 'PUDP', 'score': 7.15}, {'connected_gene': 'GC0XP007237', 'score': 0.37}, {'connected_gene': 'GC0XP007191', 'score': 0.31}, {'connected_gene': 'GC0XP007190', 'score': 0.31}]
chrX	GH0XI007138	7138660	7140134	0.43	[{'connected_gene': 'GC0XM007135', 'score': 550.77}, {'connected_gene': 'PUDP', 'score': 8.52}, {'connected_gene': 'STS', 'score': 0.44}]
chrX	GH0XI007069	7069060	7069209	0.8	[{'connected_gene': 'ENSG00000228550', 'score': 0.26}, {'connected_gene': 'GC0XP007028', 'score': 0.26}, {'connected_gene': 'PUDP', 'score': 0.18}]
chrX	GH0XI007091	7091966	7092345	0.51	[{'connected_gene': 'ENSG00000228550', 'score': 0.34}, {'connected_gene': 'PUDP', 'score': 0.22}, {'connected_gene': 'GC0XP007028', 'score': 0.21}]
chrX	GH0XI007090	7089300	7089449	0.69	[{'connected_gene': 'ENSG00000228550', 'score': 0.34}, {'connected_gene': 'PUDP', 'score': 0.22}, {'connected_gene': 'GC0XP007028', 'score': 0.21}]
chrX	GH0XI007093	7090320	7091718	1.05	[{'connected_gene': 'ENSG00000228550', 'score': 0.34}, {'connected_gene': 'PUDP', 'score': 0.22}, {'connected_gene': 'GC0XP007028', 'score': 0.21}]
chrX	GH0XI007088	7088900	7089049	0.74	[{'connected_gene': 'ENSG00000228550', 'score': 0.34}, {'connected_gene': 'PUDP', 'score': 0.22}, {'connected_gene': 'GC0XP007028', 'score': 0.21}]
chrX	GH0XI007076	7076260	7076409	0.51	[{'connected_gene': 'ENSG00000228550', 'score': 0.28}, {'connected_gene': 'GC0XP007028', 'score': 0.25}, {'connected_gene': 'PUDP', 'score': 0.19}]
chrX	GH0XI007075	7075474	7076107	0.31	[{'connected_gene': 'ENSG00000228550', 'score': 0.28}, {'connected_gene': 'GC0XP007028', 'score': 0.25}, {'connected_gene': 'PUDP', 'score': 0.19}]
chrX	GH0XI007115	7115160	7115955	1.15	[{'connected_gene': 'ENSG00000228550', 'score': 0.77}, {'connected_gene': 'GC0XM007135', 'score': 0.34}, {'connected_gene': 'PUDP', 'score': 0.29}]
chrX	GH0XI007094	7094609	7096430	0.2	[{'connected_gene': 'ENSG00000228550', 'score': 0.37}, {'connected_gene': 'PUDP', 'score': 0.23}, {'connected_gene': 'GC0XP007028', 'score': 0.2}]
chrX	GH0XI007087	7087240	7087633	0.31	[{'connected_gene': 'ENSG00000228550', 'score': 0.31}, {'connected_gene': 'GC0XP007028', 'score': 0.22}, {'connected_gene': 'PUDP', 'score': 0.21}]
chrX	GH0XI007092	7089601	7089800	0.4	[{'connected_gene': 'ENSG00000228550', 'score': 0.34}, {'connected_gene': 'PUDP', 'score': 0.22}, {'connected_gene': 'GC0XP007028', 'score': 0.21}]