PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000370005	[[103986084, 103986406], [103987382, 103987514], [103988173, 103988325], [103988581, 103989346]]	[[103986305, 103986406], [103987382, 103987514], [103988173, 103988325], [103988581, 103989009]]
NM_152310	[[103986034, 103986406], [103987382, 103987514], [103988173, 103988325], [103988581, 103989346]]	[[103986305, 103986406], [103987382, 103987514], [103988173, 103988325], [103988581, 103989009]]

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr10	GH10I102150	102150664	102154098	2.1	[{'connected_gene': 'NOLC1', 'score': 550.77}, {'connected_gene': 'HPS6', 'score': 25.8}, {'connected_gene': 'PPRC1', 'score': 14.77}, {'connected_gene': 'LDB1', 'score': 14.77}, {'connected_gene': 'GBF1', 'score': 13.64}, {'connected_gene': 'POLL', 'score': 9.73}, {'connected_gene': 'ELOVL3', 'score': 0.19}]
chr10	GH10I102347	102347344	102347493	0.56	[{'connected_gene': 'ELOVL3', 'score': 11.57}, {'connected_gene': 'NOLC1', 'score': 10.52}, {'connected_gene': 'NFKB2', 'score': 0.25}, {'connected_gene': 'GC10P102289', 'score': 0.22}, {'connected_gene': 'GBF1', 'score': 0.15}]
chr10	GH10I102195	102195061	102196074	0.31	[{'connected_gene': 'ELOVL3', 'score': 12.01}, {'connected_gene': 'GBF1', 'score': 11.02}, {'connected_gene': 'PITX3', 'score': 11.02}, {'connected_gene': 'PSD', 'score': 9.96}, {'connected_gene': 'FBXL15', 'score': 9.96}, {'connected_gene': 'NOLC1', 'score': 0.26}]
chr10	GH10I102188	102188292	102189988	0.82	[{'connected_gene': 'ELOVL3', 'score': 11.23}, {'connected_gene': 'PITX3', 'score': 10.88}, {'connected_gene': 'GBF1', 'score': 10.87}, {'connected_gene': 'NOLC1', 'score': 0.28}]
chr10	GH10I102197	102197024	102197173	0.52	[{'connected_gene': 'ELOVL3', 'score': 12.01}, {'connected_gene': 'PITX3', 'score': 11.03}, {'connected_gene': 'GBF1', 'score': 11.02}, {'connected_gene': 'PSD', 'score': 9.96}, {'connected_gene': 'FBXL15', 'score': 9.96}, {'connected_gene': 'NOLC1', 'score': 0.26}]
chr10	GH10I102178	102178173	102178514	0.34	[{'connected_gene': 'ELOVL3', 'score': 11.56}, {'connected_gene': 'PPRC1', 'score': 10.75}, {'connected_gene': 'NOLC1', 'score': 0.31}]
chr10	GH10I102225	102225199	102227359	1.94	[{'connected_gene': 'ELOVL3', 'score': 550.77}, {'connected_gene': 'KCNIP2-AS1', 'score': 13.78}, {'connected_gene': 'HPS6', 'score': 4.33}, {'connected_gene': 'PITX3', 'score': 0.37}]
chr10	GH10I102169	102169201	102170193	1.11	[{'connected_gene': 'GBF1', 'score': 20.45}, {'connected_gene': 'NOLC1', 'score': 11.79}, {'connected_gene': 'ELOVL3', 'score': 11.56}, {'connected_gene': 'HPS6', 'score': 11.08}, {'connected_gene': 'PITX3', 'score': 10.8}, {'connected_gene': 'PPRC1', 'score': 10.78}, {'connected_gene': 'NFKB2', 'score': 10.58}, {'connected_gene': 'PSD', 'score': 10.29}, {'connected_gene': 'FBXL15', 'score': 10.29}]
chr10	GH10I102309	102309990	102311938	1.1	[{'connected_gene': 'GBF1', 'score': 11.32}, {'connected_gene': 'PITX3', 'score': 11.32}, {'connected_gene': 'ELOVL3', 'score': 10.64}, {'connected_gene': 'FBXL15', 'score': 4.96}, {'connected_gene': 'GC10P102289', 'score': 0.34}, {'connected_gene': 'NFKB2', 'score': 0.18}]
chr10	GH10I102325	102325959	102329333	0.74	[{'connected_gene': 'GBF1', 'score': 11.48}, {'connected_gene': 'PITX3', 'score': 11.47}, {'connected_gene': 'ELOVL3', 'score': 11.22}, {'connected_gene': 'NFKB2', 'score': 10.76}, {'connected_gene': 'RPARP-AS1', 'score': 5.66}, {'connected_gene': 'BORCS7', 'score': 4.94}, {'connected_gene': 'CUEDC2', 'score': 4.78}, {'connected_gene': 'KCNIP2', 'score': 4.77}, {'connected_gene': 'SFXN2', 'score': 3.65}, {'connected_gene': 'GC10P102289', 'score': 0.28}]
chr10	GH10I102352	102352204	102352353	0.68	[{'connected_gene': 'GBF1', 'score': 11.96}, {'connected_gene': 'PITX3', 'score': 11.95}, {'connected_gene': 'ELOVL3', 'score': 11.18}, {'connected_gene': 'NFKB2', 'score': 0.26}, {'connected_gene': 'GC10P102289', 'score': 0.21}]
chr10	GH10I102484	102484304	102486305	0.2	[{'connected_gene': 'MFSD13A', 'score': 23.26}, {'connected_gene': 'C10orf95', 'score': 11.76}, {'connected_gene': 'RNU6-43P', 'score': 11.41}, {'connected_gene': 'NFKB2', 'score': 11.39}, {'connected_gene': 'MIR146B', 'score': 11.22}, {'connected_gene': 'CUEDC2', 'score': 11.21}, {'connected_gene': 'PSD', 'score': 11.1}, {'connected_gene': 'FBXL15', 'score': 11.09}, {'connected_gene': 'ELOVL3', 'score': 10.28}, {'connected_gene': 'ENSG00000273262', 'score': 0.77}, {'connected_gene': 'ACTR1A', 'score': 0.37}, {'connected_gene': 'GC10M102448', 'score': 0.28}, {'connected_gene': 'GC10M102383', 'score': 0.08}, {'connected_gene': 'GC10M102382', 'score': 0.08}]
chr10	GH10I102462	102462732	102464370	0.86	[{'connected_gene': 'MFSD13A', 'score': 40.71}, {'connected_gene': 'MIR146B', 'score': 11.54}, {'connected_gene': 'CUEDC2', 'score': 11.52}, {'connected_gene': 'FBXL15', 'score': 11.45}, {'connected_gene': 'PSD', 'score': 11.45}, {'connected_gene': 'SUFU', 'score': 11.02}, {'connected_gene': 'RNU6-43P', 'score': 10.87}, {'connected_gene': 'NFKB2', 'score': 10.63}, {'connected_gene': 'ELOVL3', 'score': 9.66}, {'connected_gene': 'GC10P102468', 'score': 0.77}, {'connected_gene': 'ACTR1A', 'score': 0.28}, {'connected_gene': 'GC10M102448', 'score': 0.22}, {'connected_gene': 'GC10M102383', 'score': 0.07}, {'connected_gene': 'GC10M102382', 'score': 0.07}]
chr10	GH10I102478	102478758	102479696	0.93	[{'connected_gene': 'MFSD13A', 'score': 34.93}, {'connected_gene': 'SUFU', 'score': 11.69}, {'connected_gene': 'MIR146B', 'score': 11.59}, {'connected_gene': 'CUEDC2', 'score': 11.58}, {'connected_gene': 'RNU6-43P', 'score': 11.27}, {'connected_gene': 'NFKB2', 'score': 11.2}, {'connected_gene': 'ELOVL3', 'score': 10.29}, {'connected_gene': 'ENSG00000273262', 'score': 0.77}, {'connected_gene': 'PIR54211', 'score': 0.44}, {'connected_gene': 'GC10P102474', 'score': 0.44}, {'connected_gene': 'ACTR1A', 'score': 0.34}, {'connected_gene': 'GC10M102448', 'score': 0.26}, {'connected_gene': 'GC10M102383', 'score': 0.08}, {'connected_gene': 'GC10M102382', 'score': 0.08}]
chr10	GH10I102333	102333991	102335501	0.63	[{'connected_gene': 'FBXL15', 'score': 14.93}, {'connected_gene': 'ELOVL3', 'score': 10.88}, {'connected_gene': 'GBF1', 'score': 10.85}, {'connected_gene': 'PITX3', 'score': 10.84}, {'connected_gene': 'NFKB2', 'score': 10.6}, {'connected_gene': 'NOLC1', 'score': 10.2}, {'connected_gene': 'PSD', 'score': 10.12}, {'connected_gene': 'GC10P102289', 'score': 0.25}]
chr10	GH10I102282	102282115	102283715	0.31	[{'connected_gene': 'PSD', 'score': 15.61}, {'connected_gene': 'GBF1', 'score': 11.3}, {'connected_gene': 'PITX3', 'score': 11.29}, {'connected_gene': 'ELOVL3', 'score': 10.66}, {'connected_gene': 'FBXL15', 'score': 9.8}, {'connected_gene': 'C10orf95', 'score': 9.68}, {'connected_gene': 'MFSD13A', 'score': 9.67}, {'connected_gene': 'CUEDC2', 'score': 4.74}, {'connected_gene': 'GC10P102286', 'score': 0.77}]
chr10	GH10I102368	102368184	102368353	0.63	[{'connected_gene': 'FBXL15', 'score': 11.27}, {'connected_gene': 'PSD', 'score': 11.27}, {'connected_gene': 'NFKB2', 'score': 11.1}, {'connected_gene': 'ELOVL3', 'score': 10.91}, {'connected_gene': 'C10orf95', 'score': 10.21}, {'connected_gene': 'MFSD13A', 'score': 10.19}, {'connected_gene': 'GC10P102289', 'score': 0.18}, {'connected_gene': 'GBF1', 'score': 0.13}]
chr10	GH10I102261	102261275	102264101	0.4	[{'connected_gene': 'PITX3', 'score': 13.37}, {'connected_gene': 'ELOVL3', 'score': 10.81}, {'connected_gene': 'HPS6', 'score': 6.75}, {'connected_gene': 'PSD', 'score': 5.31}, {'connected_gene': 'C10orf95', 'score': 4.94}, {'connected_gene': 'CUEDC2', 'score': 4.33}, {'connected_gene': 'NFKB2', 'score': 4.0}, {'connected_gene': 'GBF1', 'score': 0.37}, {'connected_gene': 'GC10P102286', 'score': 0.34}]
chr10	GH10I102229	102229635	102232253	1.21	[{'connected_gene': 'PITX3', 'score': 8.85}, {'connected_gene': 'ELOVL3', 'score': 0.44}]
chr10	GH10I102234	102234358	102236606	0.63	[{'connected_gene': 'PITX3', 'score': 7.21}, {'connected_gene': 'ELOVL3', 'score': 0.39}]
chr10	GH10I102342	102342256	102344577	0.99	[{'connected_gene': 'PITX3', 'score': 20.12}, {'connected_gene': 'GBF1', 'score': 11.66}, {'connected_gene': 'ELOVL3', 'score': 11.57}, {'connected_gene': 'NOLC1', 'score': 10.52}, {'connected_gene': 'FBXL15', 'score': 10.29}, {'connected_gene': 'PSD', 'score': 10.29}, {'connected_gene': 'C10orf95', 'score': 9.45}, {'connected_gene': 'MFSD13A', 'score': 9.44}, {'connected_gene': 'ACTR1A', 'score': 1.96}, {'connected_gene': 'NFKB2', 'score': 0.23}, {'connected_gene': 'GC10P102289', 'score': 0.23}]
chr10	GH10I102273	102273486	102274725	0.2	[{'connected_gene': 'PITX3', 'score': 20.13}, {'connected_gene': 'GBF1', 'score': 11.7}, {'connected_gene': 'ELOVL3', 'score': 10.84}, {'connected_gene': 'NFKB2', 'score': 10.57}, {'connected_gene': 'GC10P102286', 'score': 0.39}]
chr10	GH10I102312	102312004	102313666	0.77	[{'connected_gene': 'PITX3', 'score': 19.79}, {'connected_gene': 'GBF1', 'score': 11.32}, {'connected_gene': 'ELOVL3', 'score': 10.64}, {'connected_gene': 'POLL', 'score': 6.64}, {'connected_gene': 'GC10P102289', 'score': 0.34}, {'connected_gene': 'NFKB2', 'score': 0.18}]
chr10	GH10I102322	102322769	102325287	0.74	[{'connected_gene': 'PITX3', 'score': 19.27}, {'connected_gene': 'GBF1', 'score': 11.31}, {'connected_gene': 'ELOVL3', 'score': 11.22}, {'connected_gene': 'BORCS7', 'score': 5.27}, {'connected_gene': 'GC10P102289', 'score': 0.29}, {'connected_gene': 'NFKB2', 'score': 0.19}]
chr10	GH10I102267	102267744	102270350	0.69	[{'connected_gene': 'PITX3', 'score': 20.26}, {'connected_gene': 'GBF1', 'score': 12.45}, {'connected_gene': 'ELOVL3', 'score': 10.99}, {'connected_gene': 'BORCS7', 'score': 5.12}, {'connected_gene': 'GC10P102286', 'score': 0.37}]
chr10	GH10I102239	102239887	102242832	1.92	[{'connected_gene': 'PITX3', 'score': 559.08}, {'connected_gene': 'PSD', 'score': 5.84}, {'connected_gene': 'ELOVL3', 'score': 0.37}]
chr10	GH10I102279	102279142	102281954	1.06	[{'connected_gene': 'NFKB2', 'score': 20.25}, {'connected_gene': 'PPRC1', 'score': 13.57}, {'connected_gene': 'LDB1', 'score': 12.4}, {'connected_gene': 'GBF1', 'score': 11.66}, {'connected_gene': 'PITX3', 'score': 11.66}, {'connected_gene': 'ELOVL3', 'score': 10.81}, {'connected_gene': 'C10orf95', 'score': 10.16}, {'connected_gene': 'MFSD13A', 'score': 10.15}, {'connected_gene': 'HPS6', 'score': 9.93}, {'connected_gene': 'KCNIP2', 'score': 4.77}, {'connected_gene': 'GC10P102286', 'score': 0.44}]
chr10	GH10I102393	102393427	102398124	2.27	[{'connected_gene': 'NFKB2', 'score': 555.02}, {'connected_gene': 'PPRC1', 'score': 14.52}, {'connected_gene': 'GBF1', 'score': 14.04}, {'connected_gene': 'SFXN2', 'score': 13.69}, {'connected_gene': 'C10orf95', 'score': 11.16}, {'connected_gene': 'MFSD13A', 'score': 11.15}, {'connected_gene': 'ELOVL3', 'score': 10.64}, {'connected_gene': 'TAF5', 'score': 10.14}, {'connected_gene': 'PITX3', 'score': 7.99}, {'connected_gene': 'RPARP-AS1', 'score': 6.29}, {'connected_gene': 'BORCS7', 'score': 5.28}, {'connected_gene': 'PSD', 'score': 4.63}, {'connected_gene': 'FBXL15', 'score': 0.34}, {'connected_gene': 'GC10M102383', 'score': 0.06}, {'connected_gene': 'GC10M102382', 'score': 0.06}]
chr10	GH10I102290	102290898	102292011	0.58	[{'connected_gene': 'GC10P102289', 'score': 550.77}, {'connected_gene': 'GBF1', 'score': 11.1}, {'connected_gene': 'PITX3', 'score': 11.1}, {'connected_gene': 'ELOVL3', 'score': 10.69}, {'connected_gene': 'C10orf76', 'score': 7.45}, {'connected_gene': 'PSD', 'score': 5.43}, {'connected_gene': 'HPS6', 'score': 4.26}, {'connected_gene': 'NFKB2', 'score': 0.15}]
chr10	GH10I102467	102467548	102470200	0.87	[{'connected_gene': 'GC10P102468', 'score': 550.77}, {'connected_gene': 'MFSD13A', 'score': 39.59}, {'connected_gene': 'MIR146B', 'score': 12.06}, {'connected_gene': 'CUEDC2', 'score': 12.04}, {'connected_gene': 'SUFU', 'score': 11.7}, {'connected_gene': 'NFKB2', 'score': 11.63}, {'connected_gene': 'RNU6-43P', 'score': 11.53}, {'connected_gene': 'FBXL15', 'score': 11.09}, {'connected_gene': 'PSD', 'score': 11.09}, {'connected_gene': 'ELOVL3', 'score': 10.14}, {'connected_gene': 'RPARP-AS1', 'score': 5.24}, {'connected_gene': 'GC10P102474', 'score': 0.77}, {'connected_gene': 'PIR54211', 'score': 0.77}, {'connected_gene': 'ACTR1A', 'score': 0.29}, {'connected_gene': 'GC10M102448', 'score': 0.23}, {'connected_gene': 'GC10M102383', 'score': 0.07}, {'connected_gene': 'GC10M102382', 'score': 0.07}]
chr10	GH10I102522	102522773	102524182	0.46	[{'connected_gene': 'GC10M102448', 'score': 550.77}, {'connected_gene': 'MFSD13A', 'score': 45.14}, {'connected_gene': 'SUFU', 'score': 11.6}, {'connected_gene': 'ACTR1A', 'score': 11.57}, {'connected_gene': 'RNU6-43P', 'score': 11.46}, {'connected_gene': 'C10orf95', 'score': 10.68}, {'connected_gene': 'ELOVL3', 'score': 9.41}, {'connected_gene': 'GC10P102525', 'score': 0.77}, {'connected_gene': 'GC10M102383', 'score': 0.09}, {'connected_gene': 'GC10M102382', 'score': 0.09}]
chr10	GH10I102473	102473524	102473673	0.2	[{'connected_gene': 'PIR54211', 'score': 550.77}, {'connected_gene': 'GC10P102474', 'score': 550.77}, {'connected_gene': 'SUFU', 'score': 11.67}, {'connected_gene': 'MIR146B', 'score': 11.61}, {'connected_gene': 'CUEDC2', 'score': 11.59}, {'connected_gene': 'RNU6-43P', 'score': 11.26}, {'connected_gene': 'NFKB2', 'score': 11.22}, {'connected_gene': 'ELOVL3', 'score': 10.29}, {'connected_gene': 'GC10P102468', 'score': 0.44}, {'connected_gene': 'MFSD13A', 'score': 0.39}, {'connected_gene': 'ACTR1A', 'score': 0.31}, {'connected_gene': 'GC10M102448', 'score': 0.25}, {'connected_gene': 'GC10M102383', 'score': 0.07}, {'connected_gene': 'GC10M102382', 'score': 0.07}]