PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
NM_003524	[[26251878, 26252303]]	[[26251878, 26252259]]

Promoter

Chrom	Start	End	Description
chr6	26251822	26251833	CAGE_peak_2_at_HIST1H2BH_5end
chr6	26251835	26251848	CAGE_peak_1_at_HIST1H2BH_5end
chr6	26251938	26251963	CAGE_peak_4_at_HIST1H2BH_5end
chr6	26251989	26252003	CAGE_peak_3_at_HIST1H2BH_5end
chr6	26252009	26252025	CAGE_peak_5_at_HIST1H2BH_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr6	GH06I026120	26120087	26127861	2.85	[{'connected_gene': 'HIST1H2AC', 'score': 552.85}, {'connected_gene': 'PIR44445', 'score': 550.77}, {'connected_gene': 'HIST1H2BC', 'score': 550.77}, {'connected_gene': 'PIR32750', 'score': 550.77}, {'connected_gene': 'PIR33095', 'score': 550.77}, {'connected_gene': 'ABT1', 'score': 61.93}, {'connected_gene': 'HMGN4', 'score': 48.11}, {'connected_gene': 'BTN2A3P', 'score': 41.78}, {'connected_gene': 'BTN2A1', 'score': 40.03}, {'connected_gene': 'BTN2A2', 'score': 31.27}, {'connected_gene': 'ENSG00000272462', 'score': 28.42}, {'connected_gene': 'NUP50P2', 'score': 22.39}, {'connected_gene': 'BTN3A1', 'score': 13.66}, {'connected_gene': 'BTN3A3', 'score': 10.54}, {'connected_gene': 'HFE', 'score': 9.93}, {'connected_gene': 'HIST1H1D', 'score': 9.92}, {'connected_gene': 'BTN3A2', 'score': 8.7}, {'connected_gene': 'HIST1H1C', 'score': 7.05}, {'connected_gene': 'HIST1H2APS5', 'score': 6.41}, {'connected_gene': 'HIST1H4F', 'score': 2.02}, {'connected_gene': 'HIST1H4E', 'score': 1.89}, {'connected_gene': 'HIST1H1E', 'score': 1.78}, {'connected_gene': 'HIST1H4A', 'score': 1.75}, {'connected_gene': 'HIST1H2BH', 'score': 1.57}, {'connected_gene': 'HIST1H3C', 'score': 1.57}, {'connected_gene': 'HIST1H4B', 'score': 1.49}, {'connected_gene': 'HIST1H2AE', 'score': 1.38}, {'connected_gene': 'HIST1H3F', 'score': 1.36}, {'connected_gene': 'HIST1H2AB', 'score': 1.31}, {'connected_gene': 'HIST1H3A', 'score': 1.3}, {'connected_gene': 'HIST1H4H', 'score': 1.28}, {'connected_gene': 'GC06P025915', 'score': 0.08}]
chr6	GH06I026248	26248916	26261823	2.45	[{'connected_gene': 'LOC105374986', 'score': 550.77}, {'connected_gene': 'HIST1H2BH', 'score': 550.77}, {'connected_gene': 'HIST1H3F', 'score': 550.77}, {'connected_gene': 'ABT1', 'score': 44.2}, {'connected_gene': 'HMGN4', 'score': 25.87}, {'connected_gene': 'BTN2A1', 'score': 25.81}, {'connected_gene': 'BTN2A3P', 'score': 20.72}, {'connected_gene': 'HIST1H3E', 'score': 20.63}, {'connected_gene': 'BTN2A2', 'score': 19.1}, {'connected_gene': 'ZNF322', 'score': 12.5}, {'connected_gene': 'GUSBP2', 'score': 12.05}, {'connected_gene': 'HIST1H2APS3', 'score': 11.76}, {'connected_gene': 'HIST1H4H', 'score': 11.2}, {'connected_gene': 'HIST1H2BE', 'score': 11.13}, {'connected_gene': 'LARP1P1', 'score': 11.11}, {'connected_gene': 'HIST1H4C', 'score': 9.73}, {'connected_gene': 'HIST1H2AE', 'score': 7.98}, {'connected_gene': 'ENSG00000272462', 'score': 6.19}, {'connected_gene': 'HIST1H2BD', 'score': 5.5}, {'connected_gene': 'BTN3A1', 'score': 5.05}, {'connected_gene': 'GC06M026655', 'score': 0.77}]
chr6	GH06I026294	26294831	26298018	1.46	[{'connected_gene': 'GC06P027053', 'score': 550.77}, {'connected_gene': 'HMGN4', 'score': 29.88}, {'connected_gene': 'HIST1H3E', 'score': 16.26}, {'connected_gene': 'ABT1', 'score': 15.4}, {'connected_gene': 'BTN2A3P', 'score': 13.87}, {'connected_gene': 'BTN2A1', 'score': 13.01}, {'connected_gene': 'HIST1H2APS4', 'score': 11.25}, {'connected_gene': 'HIST1H3G', 'score': 11.25}, {'connected_gene': 'HIST1H2BH', 'score': 11.13}, {'connected_gene': 'HIST1H2BD', 'score': 10.26}, {'connected_gene': 'HIST1H1E', 'score': 10.25}, {'connected_gene': 'HIST1H2BE', 'score': 10.01}, {'connected_gene': 'HIST1H4G', 'score': 10.01}, {'connected_gene': 'LARP1P1', 'score': 10.0}, {'connected_gene': 'HIST1H1D', 'score': 10.0}, {'connected_gene': 'HIST1H2APS3', 'score': 9.95}, {'connected_gene': 'BTN1A1', 'score': 8.85}, {'connected_gene': 'HIST1H4H', 'score': 8.29}, {'connected_gene': 'BTN3A2', 'score': 4.89}, {'connected_gene': 'GC06P027061', 'score': 0.77}]