PsyMuKB

Visualization of regulatory element with DNMs in transcripts

Visualization of de novo variants in transcripts

Visualization of original de novo CNV set

There is no corresponding data published yet, we will update it when such data available.

Transcripts

Transcript ID	Transcript exon region	Coding exon region
ENST00000493990	[[97483364, 97483821], [97484834, 97484933], [97486924, 97487074], [97499002, 97499064], [97499458, 97499527], [97503798, 97503893], [97506833, 97506963], [97510614, 97510670], [97516867, 97517047], [97519546, 97519953]]	[[97486951, 97487074], [97499002, 97499064], [97499458, 97499527], [97503798, 97503893], [97506833, 97506963], [97510614, 97510670], [97516867, 97516893]]
ENST00000494363	[[97512215, 97512246], [97516867, 97517047], [97519609, 97519951]]	None
ENST00000463745	[[97483371, 97483821], [97486924, 97487074], [97499002, 97499064], [97499458, 97499527], [97503798, 97503893], [97506833, 97506963], [97510614, 97510670], [97516867, 97517373]]	[[97486951, 97487074], [97499002, 97499064], [97499458, 97499527], [97503798, 97503893], [97506833, 97506963], [97510614, 97510670], [97516867, 97516893]]
ENST00000462412	[[97483376, 97483821], [97485475, 97485534], [97486924, 97487074], [97499002, 97499064], [97499458, 97499527], [97503798, 97503893], [97506833, 97506847]]	[[97486951, 97487074], [97499002, 97499064], [97499458, 97499527], [97503798, 97503893], [97506833, 97506847]]
ENST00000394206	[[97483594, 97483821], [97485475, 97485534], [97486924, 97487074], [97499002, 97499064], [97499458, 97499527], [97503798, 97503893], [97506833, 97506963], [97510614, 97510670], [97516867, 97517369]]	[[97486951, 97487074], [97499002, 97499064], [97499458, 97499527], [97503798, 97503893], [97506833, 97506963], [97510614, 97510670], [97516867, 97516893]]
ENST00000335979	[[97483594, 97483821], [97484834, 97484933], [97486924, 97487074], [97499002, 97499064], [97499458, 97499527], [97503798, 97503893], [97506833, 97506963], [97510614, 97510670], [97516867, 97517369]]	[[97486951, 97487074], [97499002, 97499064], [97499458, 97499527], [97503798, 97503893], [97506833, 97506963], [97510614, 97510670], [97516867, 97516893]]
ENST00000496713	[[97483610, 97483821], [97486924, 97487074], [97499002, 97499064], [97499458, 97499527], [97503798, 97503893], [97506833, 97506963], [97510057, 97510191]]	None
ENST00000476753	[[97503860, 97503893], [97506833, 97506963], [97516867, 97517379]]	[[97503860, 97503893], [97506833, 97506963], [97516867, 97516868]]
NR_136602	[[97483364, 97483821], [97486924, 97487074], [97499002, 97499064], [97499458, 97499527], [97503798, 97503893], [97506833, 97506963], [97516867, 97517047], [97519546, 97520086]]	None
NM_001323514	[[97483364, 97483821], [97486924, 97487074], [97499002, 97499064], [97499458, 97499527], [97503798, 97503893], [97506833, 97506963], [97516867, 97520086]]	[[97486951, 97487074], [97499002, 97499064], [97499458, 97499527], [97503798, 97503893], [97506833, 97506963], [97516867, 97516868]]
NR_136601	[[97483364, 97483821], [97486924, 97487074], [97499002, 97499064], [97499458, 97499527], [97503798, 97503893], [97506833, 97506963], [97510614, 97510670], [97516867, 97517047], [97519546, 97520086]]	None
NM_001278293	[[97483364, 97483821], [97486924, 97487074], [97499002, 97499064], [97499458, 97499527], [97503798, 97503893], [97506833, 97506963], [97510614, 97510670], [97516867, 97520086]]	[[97486951, 97487074], [97499002, 97499064], [97499458, 97499527], [97503798, 97503893], [97506833, 97506963], [97510614, 97510670], [97516867, 97516893]]
NR_136600	[[97483364, 97483821], [97486924, 97487074], [97499002, 97499064], [97499458, 97499527], [97503798, 97503893], [97506833, 97506963], [97510614, 97510670], [97510796, 97510809], [97516867, 97517047], [97519546, 97520086]]	None
NM_001323513	[[97483364, 97483821], [97486924, 97487074], [97499002, 97499064], [97499458, 97499527], [97503798, 97503893], [97506833, 97506963], [97510614, 97510670], [97510796, 97510809], [97516867, 97520086]]	[[97486951, 97487074], [97499002, 97499064], [97499458, 97499527], [97503798, 97503893], [97506833, 97506963], [97510614, 97510670], [97510796, 97510809], [97516867, 97516901]]
NR_136597	[[97483364, 97483821], [97486924, 97487074], [97499002, 97499064], [97499458, 97499527], [97503798, 97503893], [97506833, 97506963], [97510057, 97510670], [97516867, 97520086]]	None
NR_136598	[[97483364, 97483821], [97486924, 97487074], [97499002, 97499064], [97499458, 97499531], [97503798, 97503893], [97506833, 97506963], [97510614, 97510670], [97516867, 97520086]]	None
NM_177976	[[97483364, 97483821], [97485475, 97485534], [97486924, 97487074], [97499002, 97499064], [97499458, 97499527], [97503798, 97503893], [97506833, 97506963], [97510614, 97510670], [97516867, 97520086]]	[[97486951, 97487074], [97499002, 97499064], [97499458, 97499527], [97503798, 97503893], [97506833, 97506963], [97510614, 97510670], [97516867, 97516893]]
NR_103511	[[97483364, 97483821], [97484834, 97484933], [97486924, 97487074], [97499002, 97499064], [97499458, 97499527], [97503798, 97503893], [97506833, 97506963], [97510614, 97510670], [97516867, 97517047], [97519546, 97520086]]	None
NM_032146	[[97483364, 97483821], [97484834, 97484933], [97486924, 97487074], [97499002, 97499064], [97499458, 97499527], [97503798, 97503893], [97506833, 97506963], [97510614, 97510670], [97516867, 97520086]]	[[97486951, 97487074], [97499002, 97499064], [97499458, 97499527], [97503798, 97503893], [97506833, 97506963], [97510614, 97510670], [97516867, 97516893]]
NR_136595	[[97483364, 97483821], [97484834, 97484933], [97486924, 97487074], [97499002, 97499064], [97499458, 97499527], [97503798, 97503893], [97506833, 97506963], [97510057, 97510670], [97510796, 97510809], [97516867, 97520086]]	None

Promoter

Chrom	Start	End	Description
chr3	97483366	97483422	CAGE_peak_2_at_ARL6_5end
chr3	97483430	97483457	CAGE_peak_3_at_ARL6_5end
chr3	97483572	97483644	CAGE_peak_1_at_ARL6_5end
chr3	97483652	97483663	CAGE_peak_4_at_ARL6_5end
chr3	97483675	97483686	CAGE_peak_5_at_ARL6_5end

Enhancer

Chrom	Start	End	Genehancer ID	Score	Attributes
chr3	GH03I098013	98013557	98013706	0.67	[{'connected_gene': 'RIOX2', 'score': 10.93}, {'connected_gene': 'ARL6', 'score': 9.42}, {'connected_gene': 'GABRR3', 'score': 0.34}]
chr3	GH03I097981	97981501	97984451	0.81	[{'connected_gene': 'ARL6', 'score': 9.84}, {'connected_gene': 'RIOX2', 'score': 4.28}, {'connected_gene': 'OR5K3', 'score': 3.76}, {'connected_gene': 'OR5AC2', 'score': 2.79}, {'connected_gene': 'GABRR3', 'score': 0.23}]
chr3	GH03I097793	97793577	97793706	0.62	[{'connected_gene': 'ARL6', 'score': 11.34}, {'connected_gene': 'RIOX2', 'score': 10.26}, {'connected_gene': 'GC03M097791', 'score': 0.44}, {'connected_gene': 'GC03M097742', 'score': 0.31}]
chr3	GH03I097763	97763601	97765601	1.96	[{'connected_gene': 'ARL6', 'score': 550.77}, {'connected_gene': 'GC03M097742', 'score': 0.77}, {'connected_gene': 'EPHA6', 'score': 0.02}]